RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 MGAM2Q2M2H8 2515 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 TRBV20OR9-2A0A075B6H5 130 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 TEX48A0A1B0GUV7 120 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 K7EQG2 157 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 ISLRO14498 428 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 IGLV1-51P01701 117 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 GPX1P07203 203 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 HINT1P49773 126 aaPredicted RBP7.67□□□□□ -1.18
USP39-210ENST00000459775 PSMG4Q5JS54 123 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 MRPL54Q6P161 138 aaKnown RBP7.67□□□□□ -1.18
USP39-210ENST00000459775 SLC35B3Q9H1N7 401 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 PEX7O00628 323 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 TCRAP04437 139 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 TSPOP30536 169 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 NDUFV3P56181 108 aaKnown RBP7.67□□□□□ -1.18
USP39-210ENST00000459775 PDE6HQ13956 83 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 Q8TAT8 98 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 CMTM2Q8TAZ6 248 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 WFDC10AQ9H1F0 79 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 AAMDCQ9H7C9 122 aa7.67□□□□□ -1.18
USP39-210ENST00000459775 ZNF256Q9Y2P7 627 aaPredicted RBP7.67□□□□□ -1.18
USP39-210ENST00000459775 DIRC3C9JPN6 131 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 RHODO00212 210 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 ELOBQ15370 118 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 PLEKHB2Q96CS7 222 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 PARLQ9H300 379 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 MDFICQ9P1T7 246 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 IGKV3-20P01619 116 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 IGLV2-11P01706 119 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 CD7P09564 240 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 DEFB131AP59861 70 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 Q6Q795 121 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 HRCT1Q6UXD1 115 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 KIR2DL4Q99706 377 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 SLC50A1Q9BRV3 221 aa7.66□□□□□ -1.18
USP39-210ENST00000459775 A6NDN8 102 aa7.65□□□□□ -1.18
USP39-210ENST00000459775 KNCNA6PVL3 124 aa7.65□□□□□ -1.18
USP39-210ENST00000459775 ZNF253O75346 499 aa7.65□□□□□ -1.18
USP39-210ENST00000459775 IGLC6P0CF74 106 aa7.65□□□□□ -1.18
USP39-210ENST00000459775 LYPD1Q8N2G4 141 aa7.65□□□□□ -1.18
USP39-210ENST00000459775 WFDC9Q8NEX5 89 aa7.65□□□□□ -1.18
USP39-210ENST00000459775 CMYA5Q8N3K9 4069 aa7.65□□□□□ -1.19
USP39-210ENST00000459775 ZNF727A8MUV8 499 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 PRNTQ86SH4 94 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 C11orf52Q96A22 123 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 TVP23CQ96ET8 276 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 LINC01587Q99440 93 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 SMIM7Q9BQ49 75 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 AGPAT4-IT1Q9H0P7 198 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 Q9UF83 564 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 ARL2-SNX15V9GYD0 113 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 TMEM250H0YL14 139 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 KIR3DS1Q14943 382 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 ODF3L2Q3SX64 289 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 Q6AWC8 147 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 Q6ZQT7 251 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 Q8N1Y9 231 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 KLF12Q9Y4X4 402 aa7.64□□□□□ -1.19
USP39-210ENST00000459775 SPRY2O43597 315 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 CSN1S1P47710 185 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 CENPWQ5EE01 88 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 Q5XG85 94 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 Q6ZUT4 128 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 C8orf49Q96NF6 230 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 MAP6D1Q9H9H5 199 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 TRAV8-6A0A0B4J262 113 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 SNRPD3P62318 126 aaKnown RBP7.63□□□□□ -1.19
USP39-210ENST00000459775 IGF2BP2-AS1Q96M15 143 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 JPT2Q9H910 190 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 EDA2RQ9HAV5 297 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 PAM16Q9Y3D7 125 aa7.63□□□□□ -1.19
USP39-210ENST00000459775 IGLV2-8P01709 118 aa7.62□□□□□ -1.19
USP39-210ENST00000459775 C9orf66Q5T8R8 295 aa7.62□□□□□ -1.19
USP39-210ENST00000459775 RASL10AQ92737 203 aa7.62□□□□□ -1.19
USP39-210ENST00000459775 C9orf85Q96MD7 179 aa7.62□□□□□ -1.19
USP39-210ENST00000459775 TXNDC17Q9BRA2 123 aa7.62□□□□□ -1.19
USP39-210ENST00000459775 SMDT1Q9H4I9 107 aa7.62□□□□□ -1.19
USP39-210ENST00000459775 AGRNO00468 2067 aa7.62□□□□□ -1.19
USP39-210ENST00000459775 CXCL1P09341 107 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 FXYD7P58549 80 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 UBE2G1P62253 170 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 BAGE2Q86Y30 109 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 OR8A1Q8NGG7 326 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 NOTCH1P46531 2555 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 TRBV24-1A0A075B6N3 115 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 IFITM1P13164 125 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 KRTAP10-11P60412 298 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 PMAIP1Q13794 54 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 BEAN1Q3B7T3 259 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 LINC00322Q6ZN03 302 aaPredicted RBP7.61□□□□□ -1.19
USP39-210ENST00000459775 Q86TA4 180 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 PRR25Q96S07 402 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 C19orf73Q9NVV2 129 aa7.61□□□□□ -1.19
USP39-210ENST00000459775 RBMY1BA6NDE4 496 aaKnown RBP7.6□□□□□ -1.19
USP39-210ENST00000459775 RBMY1EA6NEQ0 496 aaKnown RBP7.6□□□□□ -1.19
USP39-210ENST00000459775 RBMY1DP0C7P1 496 aaKnown RBP7.6□□□□□ -1.19
USP39-210ENST00000459775 MGST1P10620 155 aaKnown RBP7.6□□□□□ -1.19
USP39-210ENST00000459775 RPL23P62829 140 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms