RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 IGHV3-16A0A0C4DH30 117 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 PRSS29PA6NIE9 313 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 RNF223E7ERA6 249 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 F8W1H4 67 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 GNRH2O43555 120 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 CRYBA4P53673 196 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 FXYD2P54710 66 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 DEFB112Q30KQ8 113 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 SUMO4Q6EEV6 95 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 ZFP2Q6ZN57 461 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 LRRC75A-AS1Q8N1F1 130 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 PTH2Q96A98 100 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 RAB37Q96AX2 223 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 RPL39LQ96EH5 51 aaKnown RBP6.62□□□□□ -1.35
HDAC3-202ENST00000459727 BEX4Q9NWD9 120 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-202ENST00000459727 NHP2Q9NX24 153 aaKnown RBP6.62□□□□□ -1.35
HDAC3-202ENST00000459727 PEMTQ9UBM1 199 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 ZNF256Q9Y2P7 627 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-202ENST00000459727 ARHGAP32A7KAX9 2087 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 PRRC2CQ9Y520 2896 aaKnown RBP6.62□□□□□ -1.35
HDAC3-202ENST00000459727 ITPR3Q14573 2671 aa6.62□□□□□ -1.35
HDAC3-202ENST00000459727 DOPEY2Q9Y3R5 2298 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 IGKV3-7A0A075B6H7 116 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 TRBV7-3A0A075B6L6 115 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 F5H697 171 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 F6UB75 175 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 FSHBP01225 129 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 IGHV4-59P01825 116 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 PCP4P48539 62 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 LINC00315P59091 139 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 SCGB1D4Q6XE38 83 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 NEGR1Q7Z3B1 354 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 ZNF479Q96JC4 524 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 PRADC1Q9BSG0 188 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 TP53TG1Q9Y2A0 90 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 ABCA1O95477 2261 aa6.61□□□□□ -1.35
HDAC3-202ENST00000459727 AKAP9Q99996 3911 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 TRAV12-3A0A0B4J271 114 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 SDHAF1A6NFY7 115 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 IGIPA6NJ69 53 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 ZNF815PA8K554 130 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 A8MTW9 85 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 ZNF688P0C7X2 276 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 COTL1Q14019 142 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 ZNF56Q15929 161 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 RNF151Q2KHN1 245 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 C12orf74Q32Q52 190 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 Q5PR19 223 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 Q6YL49 198 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 PHLDA1Q8WV24 401 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-202ENST00000459727 WFDC12Q8WWY7 111 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 SPANXB1Q9NS25 103 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-202ENST00000459727 ABCA4P78363 2273 aa6.6□□□□□ -1.35
HDAC3-202ENST00000459727 A0A096LNT2 108 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 A8MWV9 139 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 I3L3M4 83 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 J3QKU1 62 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 RHODO00212 210 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 TGFAP01135 160 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 TCTAP57738 103 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 RRN3P1Q2M238 152 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 ZNF876PQ49A33 203 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 Q6ZQT7 251 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 NFE4Q86UQ8 179 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 Q8N2B8 174 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 TMEM86BQ8N661 226 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 LINC00467Q9BRT7 94 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 MDFICQ9P1T7 246 aa6.59□□□□□ -1.35
HDAC3-202ENST00000459727 NF1P21359 2839 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 IGLL5B9A064 214 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 G3V4G9 280 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 M0QY20 66 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 AVPP01185 164 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 HOXD3P31249 432 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-202ENST00000459727 ZNF415Q09FC8 603 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 SRSF9Q13242 221 aaKnown RBP eCLIP6.58□□□□□ -1.36
HDAC3-202ENST00000459727 Q6ZS46 218 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 MAPKAPK5-AS1Q8N8E1 139 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 CLUHP3Q96NS8 147 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 ZNF702PQ9H963 129 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 CREBBPQ92793 2442 aa6.58□□□□□ -1.36
HDAC3-202ENST00000459727 HOXA3O43365 443 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-202ENST00000459727 LGALS3P17931 250 aaKnown RBP6.57□□□□□ -1.36
HDAC3-202ENST00000459727 SYNJ2BPP57105 145 aa6.57□□□□□ -1.36
HDAC3-202ENST00000459727 LCNL1Q6ZST4 164 aa6.57□□□□□ -1.36
HDAC3-202ENST00000459727 Q8N1Y9 231 aa6.57□□□□□ -1.36
HDAC3-202ENST00000459727 C4orf3Q8WVX3 66 aa6.57□□□□□ -1.36
HDAC3-202ENST00000459727 PLEKHB2Q96CS7 222 aa6.57□□□□□ -1.36
HDAC3-202ENST00000459727 DUX5Q96PT3 197 aa6.57□□□□□ -1.36
HDAC3-202ENST00000459727 SPAG8Q99932 426 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-202ENST00000459727 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
HDAC3-202ENST00000459727 C2CD3Q4AC94 2353 aa6.57□□□□□ -1.36
HDAC3-202ENST00000459727 SETD2Q9BYW2 2564 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-202ENST00000459727 CELSR2Q9HCU4 2923 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 IGLV4-69A0A075B6H9 119 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 TRBV20-1A0A075B6N2 111 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 A0A087WWL8 130 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 CRYGDP07320 174 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 SRD5A1P18405 259 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 314.1 ms