RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 H3BVH4 76 aa14.14□□□□□ -0.15
CPNE1-220ENST00000458038 PEX7O00628 323 aa14.14□□□□□ -0.15
CPNE1-220ENST00000458038 ARMS2P0C7Q2 107 aa14.14□□□□□ -0.15
CPNE1-220ENST00000458038 Q86TA4 180 aa14.14□□□□□ -0.15
CPNE1-220ENST00000458038 INO80EQ8NBZ0 244 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-220ENST00000458038 CHAC1Q9BUX1 264 aa14.14□□□□□ -0.15
CPNE1-220ENST00000458038 BORCS7-ASMTA0A0B4J1R7 106 aa14.13□□□□□ -0.15
CPNE1-220ENST00000458038 TRBV10-1A0A0K0K1A3 114 aa14.13□□□□□ -0.15
CPNE1-220ENST00000458038 Q0VG73 95 aa14.13□□□□□ -0.15
CPNE1-220ENST00000458038 SCXQ7RTU7 201 aa14.13□□□□□ -0.15
CPNE1-220ENST00000458038 SFRP2Q96HF1 295 aa14.13□□□□□ -0.15
CPNE1-220ENST00000458038 KLK12Q9UKR0 248 aa14.13□□□□□ -0.15
CPNE1-220ENST00000458038 PHLDA3Q9Y5J5 127 aa14.13□□□□□ -0.15
CPNE1-220ENST00000458038 FAM162BQ5T6X4 162 aa14.12□□□□□ -0.15
CPNE1-220ENST00000458038 FAM74A4Q5TZK3 123 aa14.12□□□□□ -0.15
CPNE1-220ENST00000458038 MED28Q9H204 178 aa14.12□□□□□ -0.15
CPNE1-220ENST00000458038 TPT1P13693 172 aaKnown RBP14.11□□□□□ -0.15
CPNE1-220ENST00000458038 RPL36AP83881 106 aaKnown RBP14.11□□□□□ -0.15
CPNE1-220ENST00000458038 C14orf177Q52M58 125 aa14.11□□□□□ -0.15
CPNE1-220ENST00000458038 ATRAIDQ6UW56 229 aa14.11□□□□□ -0.15
CPNE1-220ENST00000458038 RPL36ALQ969Q0 106 aaKnown RBP14.11□□□□□ -0.15
CPNE1-220ENST00000458038 ZC2HC1AQ96GY0 325 aa14.11□□□□□ -0.15
CPNE1-220ENST00000458038 FAM74A7A6NL05 159 aa14.1□□□□□ -0.15
CPNE1-220ENST00000458038 CRIP1P50238 77 aa14.1□□□□□ -0.15
CPNE1-220ENST00000458038 UBE2WQ96B02 151 aa14.1□□□□□ -0.15
CPNE1-220ENST00000458038 FMC1Q96HJ9 113 aa14.1□□□□□ -0.15
CPNE1-220ENST00000458038 M0R036 132 aa14.09□□□□□ -0.15
CPNE1-220ENST00000458038 SH2D1AO60880 128 aa14.09□□□□□ -0.15
CPNE1-220ENST00000458038 UBE2G2P60604 165 aa14.09□□□□□ -0.15
CPNE1-220ENST00000458038 ZNF726P1Q15940 193 aa14.09□□□□□ -0.15
CPNE1-220ENST00000458038 LINC01620Q4KN68 170 aa14.09□□□□□ -0.15
CPNE1-220ENST00000458038 SERTAD4-AS1Q5TG53 156 aa14.09□□□□□ -0.15
CPNE1-220ENST00000458038 RPL7L1Q6DKI1 246 aaKnown RBP14.09□□□□□ -0.15
CPNE1-220ENST00000458038 TCEAL7Q9BRU2 100 aa14.09□□□□□ -0.15
CPNE1-220ENST00000458038 TRBV7-3A0A075B6L6 115 aa14.08□□□□□ -0.16
CPNE1-220ENST00000458038 A0A087WWL8 130 aa14.08□□□□□ -0.16
CPNE1-220ENST00000458038 GIPP09681 153 aaPredicted RBP14.08□□□□□ -0.16
CPNE1-220ENST00000458038 UBE2G1P62253 170 aa14.08□□□□□ -0.16
CPNE1-220ENST00000458038 ZNF674Q2M3X9 581 aa14.08□□□□□ -0.16
CPNE1-220ENST00000458038 ZFP82Q8N141 532 aa14.08□□□□□ -0.16
CPNE1-220ENST00000458038 TRBV6-1A0A0K0K1D8 114 aa14.07□□□□□ -0.16
CPNE1-220ENST00000458038 GRIFINA4D1Z8 144 aa14.07□□□□□ -0.16
CPNE1-220ENST00000458038 OXTP01178 125 aa14.07□□□□□ -0.16
CPNE1-220ENST00000458038 LINC01559Q495D7 138 aa14.07□□□□□ -0.16
CPNE1-220ENST00000458038 AKR1C8PQ5T2L2 129 aa14.07□□□□□ -0.16
CPNE1-220ENST00000458038 M0R381 172 aa14.06□□□□□ -0.16
CPNE1-220ENST00000458038 IGLV2-8P01709 118 aa14.06□□□□□ -0.16
CPNE1-220ENST00000458038 FHITP49789 147 aa14.06□□□□□ -0.16
CPNE1-220ENST00000458038 UBE2D3P61077 147 aa14.06□□□□□ -0.16
CPNE1-220ENST00000458038 UBE2D2P62837 147 aa14.06□□□□□ -0.16
CPNE1-220ENST00000458038 CIRBP-AS1Q8TBR5 109 aa14.06□□□□□ -0.16
CPNE1-220ENST00000458038 C1orf43Q9BWL3 253 aa14.06□□□□□ -0.16
CPNE1-220ENST00000458038 PTTG1O95997 202 aa14.05□□□□□ -0.16
CPNE1-220ENST00000458038 PKIAP61925 76 aa14.05□□□□□ -0.16
CPNE1-220ENST00000458038 Q5BKY6 102 aa14.05□□□□□ -0.16
CPNE1-220ENST00000458038 OR10G8Q8NGN5 311 aa14.05□□□□□ -0.16
CPNE1-220ENST00000458038 DNAJC30Q96LL9 226 aa14.05□□□□□ -0.16
CPNE1-220ENST00000458038 LTAP01374 205 aa14.04□□□□□ -0.16
CPNE1-220ENST00000458038 RAB4BP61018 213 aa14.04□□□□□ -0.16
CPNE1-220ENST00000458038 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.04□□□□□ -0.16
CPNE1-220ENST00000458038 TRBV6-8A0A0A6YYG3 113 aa14.03□□□□□ -0.16
CPNE1-220ENST00000458038 TMEM262E9PQX1 116 aa14.03□□□□□ -0.16
CPNE1-220ENST00000458038 KRTAP10-4P60372 401 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-220ENST00000458038 FXYD6-FXYD2A0A087WZ82 144 aa14.02□□□□□ -0.17
CPNE1-220ENST00000458038 CRPP02741 224 aa14.02□□□□□ -0.17
CPNE1-220ENST00000458038 STOML3Q8TAV4 291 aa14.02□□□□□ -0.17
CPNE1-220ENST00000458038 TMSB15BA0A087X1C1 80 aa14.01□□□□□ -0.17
CPNE1-220ENST00000458038 MAP1LC3B2A6NCE7 125 aa14.01□□□□□ -0.17
CPNE1-220ENST00000458038 MAP1LC3BQ9GZQ8 125 aa14.01□□□□□ -0.17
CPNE1-220ENST00000458038 S100A9P06702 114 aaKnown RBP14□□□□□ -0.17
CPNE1-220ENST00000458038 CXCL1P09341 107 aa14□□□□□ -0.17
CPNE1-220ENST00000458038 CST9LP1Q5W188 147 aa14□□□□□ -0.17
CPNE1-220ENST00000458038 ENHOQ6UWT2 76 aa14□□□□□ -0.17
CPNE1-220ENST00000458038 TMEM97Q5BJF2 176 aa13.99□□□□□ -0.17
CPNE1-220ENST00000458038 ANGP03950 147 aaKnown RBP13.98□□□□□ -0.17
CPNE1-220ENST00000458038 AKR1C3P42330 323 aa13.98□□□□□ -0.17
CPNE1-220ENST00000458038 MIAQ16674 131 aa13.98□□□□□ -0.17
CPNE1-220ENST00000458038 DGAT2L7PQ6IED9 249 aa13.98□□□□□ -0.17
CPNE1-220ENST00000458038 PRR27Q6MZM9 219 aa13.98□□□□□ -0.17
CPNE1-220ENST00000458038 C15orf54Q8N8G6 183 aa13.98□□□□□ -0.17
CPNE1-220ENST00000458038 ZNF471Q9BX82 626 aaPredicted RBP13.98□□□□□ -0.17
CPNE1-220ENST00000458038 ZNF56Q15929 161 aa13.97□□□□□ -0.17
CPNE1-220ENST00000458038 NEXN-AS1Q8NBZ9 246 aa13.97□□□□□ -0.17
CPNE1-220ENST00000458038 LRP1Q07954 4544 aaKnown RBP13.96□□□□□ -0.17
CPNE1-220ENST00000458038 MPV17L2Q567V2 206 aa13.96□□□□□ -0.17
CPNE1-220ENST00000458038 CHCHD5Q9BSY4 110 aa13.96□□□□□ -0.17
CPNE1-220ENST00000458038 USP17L23D6RBM5 183 aa13.94□□□□□ -0.18
CPNE1-220ENST00000458038 OR5AL1P0C617 328 aa13.94□□□□□ -0.18
CPNE1-220ENST00000458038 RPL37AP61513 92 aaKnown RBP13.94□□□□□ -0.18
CPNE1-220ENST00000458038 OR10AG1Q8NH19 301 aa13.94□□□□□ -0.18
CPNE1-220ENST00000458038 SSBP4Q9BWG4 385 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-220ENST00000458038 BATF3Q9NR55 127 aa13.94□□□□□ -0.18
CPNE1-220ENST00000458038 VAX2Q9UIW0 290 aa13.94□□□□□ -0.18
CPNE1-220ENST00000458038 SNAI2O43623 268 aa13.93□□□□□ -0.18
CPNE1-220ENST00000458038 F5H697 171 aa13.92□□□□□ -0.18
CPNE1-220ENST00000458038 PAGE4O60829 102 aa13.92□□□□□ -0.18
CPNE1-220ENST00000458038 HLA-DQA1P01909 254 aa13.92□□□□□ -0.18
CPNE1-220ENST00000458038 SPANXN1Q5VSR9 72 aa13.92□□□□□ -0.18
CPNE1-220ENST00000458038 C9orf163Q8N9P6 203 aa13.92□□□□□ -0.18
CPNE1-220ENST00000458038 MLST8Q9BVC4 326 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms