RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 RIGQ13278 110 aa11.4□□□□□ -0.58
PKNOX1-204ENST00000456957 FAM74A4Q5TZK3 123 aa11.4□□□□□ -0.58
PKNOX1-204ENST00000456957 C14orf178Q8N769 122 aaPredicted RBP11.4□□□□□ -0.58
PKNOX1-204ENST00000456957 KIF25-AS1Q9Y6Z4 181 aa11.4□□□□□ -0.58
PKNOX1-204ENST00000456957 IGHV3-73A0A0B4J1V6 119 aa11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 F5H768 121 aa11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 TRGC1P0CF51 173 aa11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 EVI2AP22794 236 aa11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 FHL2Q14192 279 aa11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 MRPL54Q6P161 138 aaKnown RBP11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 KCNIP4Q6PIL6 250 aa11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 ZFP2Q6ZN57 461 aa11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 PHLDA1Q8WV24 401 aaPredicted RBP11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
PKNOX1-204ENST00000456957 A0A1B0GXF2 115 aa11.38□□□□□ -0.59
PKNOX1-204ENST00000456957 RHODO00212 210 aa11.38□□□□□ -0.59
PKNOX1-204ENST00000456957 S100PP25815 95 aa11.38□□□□□ -0.59
PKNOX1-204ENST00000456957 TRGV4A0A0C4DH28 118 aa11.37□□□□□ -0.59
PKNOX1-204ENST00000456957 CIDEAO60543 219 aa11.37□□□□□ -0.59
PKNOX1-204ENST00000456957 SMIM17P0DL12 118 aa11.37□□□□□ -0.59
PKNOX1-204ENST00000456957 GATA1P15976 413 aaPredicted RBP11.37□□□□□ -0.59
PKNOX1-204ENST00000456957 LINC00315P59091 139 aa11.37□□□□□ -0.59
PKNOX1-204ENST00000456957 MUC7Q8TAX7 377 aa11.37□□□□□ -0.59
PKNOX1-204ENST00000456957 BTF3L4Q96K17 158 aa11.37□□□□□ -0.59
PKNOX1-204ENST00000456957 KMT2CQ8NEZ4 4911 aaKnown RBP11.37□□□□□ -0.59
PKNOX1-204ENST00000456957 TRAV9-1A0A075B6T8 112 aa11.36□□□□□ -0.59
PKNOX1-204ENST00000456957 A0A1B0GW15 77 aa11.36□□□□□ -0.59
PKNOX1-204ENST00000456957 CAMPP49913 170 aa11.36□□□□□ -0.59
PKNOX1-204ENST00000456957 HBBP68871 147 aa11.36□□□□□ -0.59
PKNOX1-204ENST00000456957 ATP5L2Q7Z4Y8 100 aa11.36□□□□□ -0.59
PKNOX1-204ENST00000456957 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
PKNOX1-204ENST00000456957 DNAH7Q8WXX0 4024 aa11.35□□□□□ -0.59
PKNOX1-204ENST00000456957 MGPP08493 103 aa11.35□□□□□ -0.59
PKNOX1-204ENST00000456957 ZNF56Q15929 161 aa11.35□□□□□ -0.59
PKNOX1-204ENST00000456957 Q6ZSN1 163 aa11.35□□□□□ -0.59
PKNOX1-204ENST00000456957 SMIM15Q7Z3B0 74 aa11.35□□□□□ -0.59
PKNOX1-204ENST00000456957 TMEM191AQ9H0A3 160 aa11.35□□□□□ -0.59
PKNOX1-204ENST00000456957 HHLA3Q9XRX5 114 aa11.35□□□□□ -0.59
PKNOX1-204ENST00000456957 TRAV26-1A0A087WT03 109 aa11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 NUPR2A6NF83 97 aa11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 S100A1P23297 94 aa11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 CRYBA4P53673 196 aa11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 ZFAND6Q6FIF0 208 aa11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 TMEM88Q6PEY1 159 aa11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 CEMP1Q6PRD7 247 aaPredicted RBP11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 CBLN2Q8IUK8 224 aa11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 GATD1Q8NB37 220 aa11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
PKNOX1-204ENST00000456957 A0A0J9YY99 117 aa11.33□□□□□ -0.6
PKNOX1-204ENST00000456957 F5H697 171 aa11.33□□□□□ -0.6
PKNOX1-204ENST00000456957 S100A8P05109 93 aa11.33□□□□□ -0.6
PKNOX1-204ENST00000456957 RAB4BP61018 213 aa11.33□□□□□ -0.6
PKNOX1-204ENST00000456957 ELOBQ15370 118 aa11.33□□□□□ -0.6
PKNOX1-204ENST00000456957 SLC25A29Q8N8R3 303 aa11.33□□□□□ -0.6
PKNOX1-204ENST00000456957 VSIG2Q96IQ7 327 aa11.33□□□□□ -0.6
PKNOX1-204ENST00000456957 TGIF2-C20orf24A0A0A6YYL0 155 aa11.32□□□□□ -0.6
PKNOX1-204ENST00000456957 TRBV6-4A0A1B0GX49 114 aa11.32□□□□□ -0.6
PKNOX1-204ENST00000456957 SLAQ13239 276 aa11.32□□□□□ -0.6
PKNOX1-204ENST00000456957 AMN1Q8IY45 258 aa11.32□□□□□ -0.6
PKNOX1-204ENST00000456957 RNF185Q96GF1 192 aa11.32□□□□□ -0.6
PKNOX1-204ENST00000456957 YPEL4Q96NS1 127 aa11.32□□□□□ -0.6
PKNOX1-204ENST00000456957 SMCO4Q9NRQ5 59 aa11.32□□□□□ -0.6
PKNOX1-204ENST00000456957 K7EQD1 137 aa11.31□□□□□ -0.6
PKNOX1-204ENST00000456957 PAX4O43316 350 aa11.31□□□□□ -0.6
PKNOX1-204ENST00000456957 SCO1O75880 301 aa11.31□□□□□ -0.6
PKNOX1-204ENST00000456957 SUMO4Q6EEV6 95 aa11.31□□□□□ -0.6
PKNOX1-204ENST00000456957 RASL11AQ6T310 242 aa11.31□□□□□ -0.6
PKNOX1-204ENST00000456957 TRAV26-2A0A0B4J265 109 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 LOC100131303A0A0U1RQF7 123 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 IGLL5B9A064 214 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 P0DMU3 169 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 FAM231AP0DMU4 169 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 FAM231CP0DMU5 169 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 RAB4AP20338 218 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 RHOHQ15669 191 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 FAM104BQ5XKR9 115 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 FAM210BQ96KR6 192 aa11.3□□□□□ -0.6
PKNOX1-204ENST00000456957 TRBV24-1A0A075B6N3 115 aa11.29□□□□□ -0.6
PKNOX1-204ENST00000456957 H3BNG1 76 aa11.29□□□□□ -0.6
PKNOX1-204ENST00000456957 TMEM136Q6ZRR5 245 aa11.29□□□□□ -0.6
PKNOX1-204ENST00000456957 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
PKNOX1-204ENST00000456957 Q9UF83 564 aa11.29□□□□□ -0.6
PKNOX1-204ENST00000456957 KLK5Q9Y337 293 aaPredicted RBP11.29□□□□□ -0.6
PKNOX1-204ENST00000456957 CSMD3Q7Z407 3707 aa11.29□□□□□ -0.6
PKNOX1-204ENST00000456957 M0QY20 66 aa11.28□□□□□ -0.6
PKNOX1-204ENST00000456957 GYPEP15421 78 aa11.28□□□□□ -0.6
PKNOX1-204ENST00000456957 MRPL51Q4U2R6 128 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-204ENST00000456957 DYNC2H1Q8NCM8 4307 aaKnown RBP11.27□□□□□ -0.6
PKNOX1-204ENST00000456957 C3orf84H3BNL1 204 aa11.27□□□□□ -0.61
PKNOX1-204ENST00000456957 GAS8-AS1O95177 125 aa11.27□□□□□ -0.61
PKNOX1-204ENST00000456957 A0A096LPF7 62 aa11.26□□□□□ -0.61
PKNOX1-204ENST00000456957 TRBV10-1A0A0K0K1A3 114 aa11.26□□□□□ -0.61
PKNOX1-204ENST00000456957 SMKR1H3BMG3 65 aa11.26□□□□□ -0.61
PKNOX1-204ENST00000456957 H7C1H1 209 aa11.26□□□□□ -0.61
PKNOX1-204ENST00000456957 NCR2O95944 276 aa11.26□□□□□ -0.61
PKNOX1-204ENST00000456957 NUDT3O95989 172 aa11.26□□□□□ -0.61
PKNOX1-204ENST00000456957 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
PKNOX1-204ENST00000456957 C15orf53Q8NAA6 179 aa11.26□□□□□ -0.61
PKNOX1-204ENST00000456957 NEXN-AS1Q8NBZ9 246 aa11.26□□□□□ -0.61
PKNOX1-204ENST00000456957 FRZBQ92765 325 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms