RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 IGHV3OR16-12A0A075B7B8 117 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 IGHV3-72A0A0B4J1Y9 119 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 NDUFA11Q86Y39 141 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 GAFA1Q96PS6 74 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 CCL24O00175 119 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 FDCSPQ8NFU4 85 aa4.12□□□□□ -1.75
CSMD3-204ENST00000455883 C4orf51C9J302 202 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 NDUFA1O15239 70 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 FOXC1Q12948 553 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 MDS2Q8NDY4 140 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 PLA2G2FQ9BZM2 168 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 CDPF1Q6NVV7 123 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 IGHV1-18A0A0C4DH31 117 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 WDR86Q86TI4 376 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 RPS28P62857 69 aaKnown RBP4.11□□□□□ -1.75
CSMD3-204ENST00000455883 AMTNQ6UX39 209 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 FAM19A3Q7Z5A8 133 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 YPEL4Q96NS1 127 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 PSPNO60542 156 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 ZNF672Q499Z4 452 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-204ENST00000455883 SMIM26A0A096LP01 95 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-204ENST00000455883 GPHB5Q86YW7 130 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 PIP4P2Q8N4L2 257 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 LINC00527Q9UJ94 153 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 PYGO1Q9Y3Y4 419 aa4.11□□□□□ -1.75
CSMD3-204ENST00000455883 IGKV1D-8A0A087WSZ0 117 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 UFSP1Q6NVU6 142 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 UBE2DNLQ8IWF7 75 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 FGFBP3Q8TAT2 258 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 COX7B2Q8TF08 81 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 IGKV3OR2-268A0A0C4DH90 116 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 TGFAP01135 160 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 IGKV2-40A0A087WW87 121 aaPredicted RBP4.1□□□□□ -1.75
CSMD3-204ENST00000455883 IGKV2D-40P01614 121 aaPredicted RBP4.1□□□□□ -1.75
CSMD3-204ENST00000455883 ODF1Q14990 250 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 DYNAPQ8N1N2 210 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 PRSS29PA6NIE9 313 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 ANKRD39Q53RE8 183 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 UPK3BQ9BT76 320 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 A0A0G2JNJ9 132 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 GP9P14770 177 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 DAD1P61803 113 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 BLCAPP62952 87 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 Q9UFV3 132 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 CRYGBP07316 175 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 UBE2D2P62837 147 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 NTN5Q8WTR8 489 aaPredicted RBP4.1□□□□□ -1.75
CSMD3-204ENST00000455883 Q9H8V8 135 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 IGKV1D-17A0A075B6S4 117 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 ETDCA0A1B0GVM5 59 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 A0A1B0GXF2 115 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 PRR31Q5SQ13 230 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 K7EN84 100 aa4.1□□□□□ -1.75
CSMD3-204ENST00000455883 TRBV10-3A0A0K0K1G6 114 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 DIRC1Q969H9 104 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 USP17L23D6RBM5 183 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 C15orf65H3BRN8 121 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 RFPL3SP0C7P2 107 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 KRTAP27-1Q3LI81 207 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 TDRG1Q3Y452 100 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 PRORYQ9H606 182 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 FAM201AQ5SY85 155 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 UBE2E2Q96LR5 201 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 IGKV1-16P04430 117 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 COX7CP15954 63 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 TIRAPP58753 221 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 MSMBP08118 114 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 AJUBAQ96IF1 538 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 LHBP01229 141 aa4.09□□□□□ -1.75
CSMD3-204ENST00000455883 H3BTX0 84 aa4.09□□□□□ -1.76
CSMD3-204ENST00000455883 SAA4P35542 130 aa4.09□□□□□ -1.76
CSMD3-204ENST00000455883 FGF23Q9GZV9 251 aaPredicted RBP4.09□□□□□ -1.76
CSMD3-204ENST00000455883 DHRS4-AS1Q9P1J3 65 aa4.09□□□□□ -1.76
CSMD3-204ENST00000455883 SERP1Q9Y6X1 66 aa4.09□□□□□ -1.76
CSMD3-204ENST00000455883 K7EQD1 137 aa4.09□□□□□ -1.76
CSMD3-204ENST00000455883 CRYGCP07315 174 aa4.09□□□□□ -1.76
CSMD3-204ENST00000455883 IGF2BP2-AS1Q96M15 143 aa4.09□□□□□ -1.76
CSMD3-204ENST00000455883 C9orf106Q8NAJ2 232 aa4.09□□□□□ -1.76
CSMD3-204ENST00000455883 TMEM263Q8WUH6 116 aaKnown RBP4.09□□□□□ -1.76
CSMD3-204ENST00000455883 DKK2Q9UBU2 259 aa4.09□□□□□ -1.76
CSMD3-204ENST00000455883 ITPR2Q14571 2701 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 NXPH4O95158 308 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 DUX4L9Q6RFH8 374 aaPredicted RBP4.08□□□□□ -1.76
CSMD3-204ENST00000455883 VPREB3Q9UKI3 123 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 CD177Q8N6Q3 437 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 UBE2D4Q9Y2X8 147 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 ZNF706Q9Y5V0 76 aaPredicted RBP4.08□□□□□ -1.76
CSMD3-204ENST00000455883 LINC00173Q6ZV60 143 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 BPY2O14599 106 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 LEAP2Q969E1 77 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 ZNF491Q8N8L2 437 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 WFDC9Q8NEX5 89 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 WT1-ASQ06250 92 aa4.08□□□□□ -1.76
CSMD3-204ENST00000455883 NAA38Q9BRA0 125 aaKnown RBP4.08□□□□□ -1.76
CSMD3-204ENST00000455883 COL4A4P53420 1690 aaPredicted RBP4.08□□□□□ -1.76
CSMD3-204ENST00000455883 IGKV1D-43A0A0B4J1Z2 117 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 Q6ZRM9 215 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 TEX22C9J3V5 150 aa4.07□□□□□ -1.76
CSMD3-204ENST00000455883 ZNF503Q96F45 646 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms