RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 HLA-DRB4P13762 266 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 HLA-DRB4X5D2U9 266 aa9.12□□□□□ -0.95
SEMA4D-213ENST00000455551 TRAV12-1A0A0B4J245 112 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 A0A0J9YX75 114 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 PRSS29PA6NIE9 313 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 NXPH4O95158 308 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 DEFB136Q30KP8 78 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 GTF2H5Q6ZYL4 71 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 COX6B1P14854 86 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 RPL39P62891 51 aaKnown RBP9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 OCIAD2Q56VL3 154 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 HIST2H2BDQ6DRA6 164 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 TP53TG1Q9Y2A0 90 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 SPCS1Q9Y6A9 102 aa9.11□□□□□ -0.95
SEMA4D-213ENST00000455551 A0A1W2PPM0 123 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 OR11H12B2RN74 326 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 K7EP34 96 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 HOXD3P31249 432 aaPredicted RBP9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 KRTAP10-9P60411 292 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 UFSP1Q6NVU6 142 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 OR11H1Q8NG94 326 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 OR11H2Q8NH07 326 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 VPREB3Q9UKI3 123 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 EPG5Q9HCE0 2579 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 K7EQG2 157 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 HOXA3O43365 443 aaPredicted RBP9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 C18orf65Q6ZTR6 163 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 CEND1Q8N111 149 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 Q8N1Y9 231 aa9.1□□□□□ -0.95
SEMA4D-213ENST00000455551 HTN1P15515 57 aa9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 ZNF56Q15929 161 aa9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 ZNF256Q9Y2P7 627 aaPredicted RBP9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 IGHV3-16A0A0C4DH30 117 aa9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 LGALS1P09382 135 aaKnown RBP9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 SAMD5Q5TGI4 173 aa9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 BBC3Q96PG8 261 aaPredicted RBP9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 HIST1H4GQ99525 98 aa9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 ZNF580Q9UK33 172 aa9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 CYSLTR1Q9Y271 337 aa9.09□□□□□ -0.95
SEMA4D-213ENST00000455551 SDHAF1A6NFY7 115 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 PPP1R17O96001 155 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 SAMD13Q5VXD3 122 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 ZNF702PQ9H963 129 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 FABP2P12104 132 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 CDKN1BP46527 198 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 ZFP2Q6ZN57 461 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 CCDC168Q8NDH2 2452 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 SAP30O75446 220 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 SLURP1P55000 103 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 DUX3Q96PT4 197 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 PRADC1Q9BSG0 188 aa9.08□□□□□ -0.96
SEMA4D-213ENST00000455551 J3QLI3 93 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 TSHBP01222 138 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 CD300EQ496F6 205 aaPredicted RBP9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 POM121L12Q8N7R1 296 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 KIR2DL4Q99706 377 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 CR1P17927 2039 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 IGHV4-31P0DP07 118 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 POLR2KP53803 58 aaKnown RBP9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 IGHV1OR15-1A0A075B7D0 117 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 MYMXA0A1B0GTQ4 84 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 SCGB2A2Q13296 93 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 TCTEX1D4Q5JR98 221 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 C9orf85Q96MD7 179 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 TM2D2Q9BX73 214 aa9.07□□□□□ -0.96
SEMA4D-213ENST00000455551 CRYGDP07320 174 aa9.06□□□□□ -0.96
SEMA4D-213ENST00000455551 KHDC1LQ5JSQ8 128 aa9.06□□□□□ -0.96
SEMA4D-213ENST00000455551 Q6YL49 198 aa9.06□□□□□ -0.96
SEMA4D-213ENST00000455551 PHLDA1Q8WV24 401 aaPredicted RBP9.06□□□□□ -0.96
SEMA4D-213ENST00000455551 C11orf86A6NJI1 115 aa9.06□□□□□ -0.96
SEMA4D-213ENST00000455551 VCYO14598 125 aa9.06□□□□□ -0.96
SEMA4D-213ENST00000455551 PRM2P04554 102 aa9.06□□□□□ -0.96
SEMA4D-213ENST00000455551 KLHL30-AS1Q8NEE0 82 aa9.06□□□□□ -0.96
SEMA4D-213ENST00000455551 NACAE9PAV3 2078 aa9.05□□□□□ -0.96
SEMA4D-213ENST00000455551 UBR5O95071 2799 aaPredicted RBP9.05□□□□□ -0.96
SEMA4D-213ENST00000455551 TMEM89A2RUT3 159 aa9.05□□□□□ -0.96
SEMA4D-213ENST00000455551 ELANEP08246 267 aa9.05□□□□□ -0.96
SEMA4D-213ENST00000455551 SYT8Q8NBV8 401 aa9.05□□□□□ -0.96
SEMA4D-213ENST00000455551 ZNF815PA8K554 130 aa9.05□□□□□ -0.96
SEMA4D-213ENST00000455551 ZNF876PQ49A33 203 aa9.05□□□□□ -0.96
SEMA4D-213ENST00000455551 MORN3Q6PF18 240 aaPredicted RBP9.05□□□□□ -0.96
SEMA4D-213ENST00000455551 IGHV3-73A0A0B4J1V6 119 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 ODF3Q96PU9 254 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 OPRPNQ99935 248 aaPredicted RBP9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 PRRC2AP48634 2157 aaKnown RBP9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 IGIPA6NJ69 53 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 LGALS9O00182 355 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 DEFB131AP59861 70 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 SCGB1D4Q6XE38 83 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 PLEKHB2Q96CS7 222 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 IGLV4-69A0A075B6H9 119 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 E9PLD3 99 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 RBMY1A1P0DJD3 496 aaKnown RBP9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 RBMY1CP0DJD4 496 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 RBMY1FQ15415 496 aaKnown RBP9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 C12orf74Q32Q52 190 aa9.04□□□□□ -0.96
SEMA4D-213ENST00000455551 TRBV7-3A0A075B6L6 115 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms