RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 GAGE12FP0CL80 117 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 GAGE12GP0CL81 117 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 GAGE12IP0CL82 117 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 LINC00315P59091 139 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 DAD1P61803 113 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 HBBP68871 147 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 TWIST1Q15672 202 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 COX19Q49B96 90 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 C11orf45Q8TAV5 145 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 FRZBQ92765 325 aa7.97□□□□□ -1.13
TRAF4-206ENST00000454852 TRGV2A0A075B6R0 118 aa7.96□□□□□ -1.14
TRAF4-206ENST00000454852 MUC21A0A0G2JKD1 596 aa7.96□□□□□ -1.14
TRAF4-206ENST00000454852 MUC21A0A140T8X8 626 aa7.96□□□□□ -1.14
TRAF4-206ENST00000454852 DEFB130BP0DP73 79 aa7.96□□□□□ -1.14
TRAF4-206ENST00000454852 DEFB130AP0DP74 79 aa7.96□□□□□ -1.14
TRAF4-206ENST00000454852 OR4C5Q8NGB2 326 aa7.96□□□□□ -1.14
TRAF4-206ENST00000454852 URGCP-MRPS24S4R325 110 aa7.96□□□□□ -1.14
TRAF4-206ENST00000454852 DNAH7Q8WXX0 4024 aa7.96□□□□□ -1.14
TRAF4-206ENST00000454852 DYNC2H1Q8NCM8 4307 aaKnown RBP7.96□□□□□ -1.14
TRAF4-206ENST00000454852 NACAE9PAV3 2078 aa7.95□□□□□ -1.14
TRAF4-206ENST00000454852 ATP5G1P05496 136 aa7.95□□□□□ -1.14
TRAF4-206ENST00000454852 EVI2AP22794 236 aa7.95□□□□□ -1.14
TRAF4-206ENST00000454852 MRPL54Q6P161 138 aaKnown RBP7.95□□□□□ -1.14
TRAF4-206ENST00000454852 SMIM15Q7Z3B0 74 aa7.95□□□□□ -1.14
TRAF4-206ENST00000454852 ZNF479Q96JC4 524 aa7.95□□□□□ -1.14
TRAF4-206ENST00000454852 DPH3P1Q9H4G8 78 aa7.95□□□□□ -1.14
TRAF4-206ENST00000454852 JPT2Q9H910 190 aa7.95□□□□□ -1.14
TRAF4-206ENST00000454852 SLAQ13239 276 aa7.94□□□□□ -1.14
TRAF4-206ENST00000454852 FHL2Q14192 279 aa7.94□□□□□ -1.14
TRAF4-206ENST00000454852 C14orf178Q8N769 122 aaPredicted RBP7.94□□□□□ -1.14
TRAF4-206ENST00000454852 GNB1LQ9BYB4 327 aa7.94□□□□□ -1.14
TRAF4-206ENST00000454852 SAMD10Q9BYL1 202 aa7.94□□□□□ -1.14
TRAF4-206ENST00000454852 TGIF2-C20orf24A0A0A6YYL0 155 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 IGHV3-53P01767 116 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 MT-ND6P03923 174 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 SMIM17P0DL12 118 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 GATA1P15976 413 aaPredicted RBP7.93□□□□□ -1.14
TRAF4-206ENST00000454852 RAB5AP20339 215 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 CAMPP49913 170 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 NANOS2P60321 138 aaKnown RBP7.93□□□□□ -1.14
TRAF4-206ENST00000454852 RAB4BP61018 213 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 FAM104BQ5XKR9 115 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 TMEM136Q6ZRR5 245 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 Q6ZTC4 211 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 FAM210BQ96KR6 192 aa7.93□□□□□ -1.14
TRAF4-206ENST00000454852 A0A087WWL8 130 aa7.92□□□□□ -1.14
TRAF4-206ENST00000454852 TRBV6-4A0A1B0GX49 114 aa7.92□□□□□ -1.14
TRAF4-206ENST00000454852 H3BNG1 76 aa7.92□□□□□ -1.14
TRAF4-206ENST00000454852 HLA-DQA1P01909 254 aa7.92□□□□□ -1.14
TRAF4-206ENST00000454852 RAB4AP20338 218 aa7.92□□□□□ -1.14
TRAF4-206ENST00000454852 HOXA5P20719 270 aa7.92□□□□□ -1.14
TRAF4-206ENST00000454852 SSTP61278 116 aa7.92□□□□□ -1.14
TRAF4-206ENST00000454852 RNF185Q96GF1 192 aa7.92□□□□□ -1.14
TRAF4-206ENST00000454852 TRAV10A0A0B4J240 114 aa7.91□□□□□ -1.14
TRAF4-206ENST00000454852 TRBV10-1A0A0K0K1A3 114 aa7.91□□□□□ -1.14
TRAF4-206ENST00000454852 FAM74A4Q5TZK3 123 aa7.91□□□□□ -1.14
TRAF4-206ENST00000454852 MRAP2Q96G30 205 aa7.91□□□□□ -1.14
TRAF4-206ENST00000454852 PRO0255Q9UI72 69 aa7.91□□□□□ -1.14
TRAF4-206ENST00000454852 C1orf196B1AJZ1 125 aa7.9□□□□□ -1.14
TRAF4-206ENST00000454852 M0QY20 66 aa7.9□□□□□ -1.14
TRAF4-206ENST00000454852 CRYBA4P53673 196 aa7.9□□□□□ -1.14
TRAF4-206ENST00000454852 Q6ZSN1 163 aa7.9□□□□□ -1.14
TRAF4-206ENST00000454852 AMN1Q8IY45 258 aa7.9□□□□□ -1.14
TRAF4-206ENST00000454852 HHLA3Q9XRX5 114 aa7.9□□□□□ -1.14
TRAF4-206ENST00000454852 DEFB131BA0A096LNP1 70 aa7.89□□□□□ -1.15
TRAF4-206ENST00000454852 TRGV4A0A0C4DH28 118 aa7.89□□□□□ -1.15
TRAF4-206ENST00000454852 H7C1H1 209 aa7.89□□□□□ -1.15
TRAF4-206ENST00000454852 PPBPP02775 128 aa7.89□□□□□ -1.15
TRAF4-206ENST00000454852 RHOHQ15669 191 aa7.89□□□□□ -1.15
TRAF4-206ENST00000454852 ZNF56Q15929 161 aa7.89□□□□□ -1.15
TRAF4-206ENST00000454852 MRPL51Q4U2R6 128 aaKnown RBP7.89□□□□□ -1.15
TRAF4-206ENST00000454852 SUMO4Q6EEV6 95 aa7.89□□□□□ -1.15
TRAF4-206ENST00000454852 SLC25A29Q8N8R3 303 aa7.89□□□□□ -1.15
TRAF4-206ENST00000454852 VSIG2Q96IQ7 327 aa7.89□□□□□ -1.15
TRAF4-206ENST00000454852 IGHV3-73A0A0B4J1V6 119 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 F5H768 121 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 K7EQD1 137 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 PPP1R17O96001 155 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 MGPP08493 103 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 LINC00694P0DN24 101 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 RPS10P46783 165 aaKnown RBP7.88□□□□□ -1.15
TRAF4-206ENST00000454852 RAB5BP61020 215 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 PHLDA1Q8WV24 401 aaPredicted RBP7.88□□□□□ -1.15
TRAF4-206ENST00000454852 DNAJC30Q96LL9 226 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 WWC2-AS2Q96NR7 200 aa7.88□□□□□ -1.15
TRAF4-206ENST00000454852 TRBV6-5A0A0K0K1A5 114 aa7.87□□□□□ -1.15
TRAF4-206ENST00000454852 F5H697 171 aa7.87□□□□□ -1.15
TRAF4-206ENST00000454852 PHOX2AO14813 284 aa7.87□□□□□ -1.15
TRAF4-206ENST00000454852 PRADC1Q9BSG0 188 aa7.87□□□□□ -1.15
TRAF4-206ENST00000454852 NIT2Q9NQR4 276 aa7.87□□□□□ -1.15
TRAF4-206ENST00000454852 LAMTOR2Q9Y2Q5 125 aa7.87□□□□□ -1.15
TRAF4-206ENST00000454852 TRAV26-1A0A087WT03 109 aa7.86□□□□□ -1.15
TRAF4-206ENST00000454852 NUPR2A6NF83 97 aa7.86□□□□□ -1.15
TRAF4-206ENST00000454852 PRSS47A8MTI9 375 aa7.86□□□□□ -1.15
TRAF4-206ENST00000454852 PAX4O43316 350 aa7.86□□□□□ -1.15
TRAF4-206ENST00000454852 APCSP02743 223 aa7.86□□□□□ -1.15
TRAF4-206ENST00000454852 CEMP1Q6PRD7 247 aaPredicted RBP7.86□□□□□ -1.15
TRAF4-206ENST00000454852 ORMDL3Q8N138 153 aa7.86□□□□□ -1.15
TRAF4-206ENST00000454852 NRACQ8N912 160 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms