RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 AQP10Q96PS8 301 aa13.84□□□□□ -0.19
TNFRSF25-208ENST00000453341 TCRAP04437 139 aa13.83□□□□□ -0.2
TNFRSF25-208ENST00000453341 CIRBPQ14011 172 aaKnown RBP13.83□□□□□ -0.2
TNFRSF25-208ENST00000453341 SMUG1Q53HV7 270 aa13.83□□□□□ -0.2
TNFRSF25-208ENST00000453341 PQLC2Q6ZP29 291 aa13.83□□□□□ -0.2
TNFRSF25-208ENST00000453341 C15orf54Q8N8G6 183 aa13.83□□□□□ -0.2
TNFRSF25-208ENST00000453341 SERTM2A0A1B0GWG4 89 aa13.82□□□□□ -0.2
TNFRSF25-208ENST00000453341 HMGB3O15347 200 aaKnown RBP13.82□□□□□ -0.2
TNFRSF25-208ENST00000453341 S100A4P26447 101 aaKnown RBP13.82□□□□□ -0.2
TNFRSF25-208ENST00000453341 A0A1W2PPV4 95 aa13.81□□□□□ -0.2
TNFRSF25-208ENST00000453341 CRPP02741 224 aa13.81□□□□□ -0.2
TNFRSF25-208ENST00000453341 ZFP69Q49AA0 526 aa13.81□□□□□ -0.2
TNFRSF25-208ENST00000453341 MPV17L2Q567V2 206 aa13.81□□□□□ -0.2
TNFRSF25-208ENST00000453341 FXYD6-FXYD2A0A087WZ82 144 aa13.8□□□□□ -0.2
TNFRSF25-208ENST00000453341 TMEM262E9PQX1 116 aa13.8□□□□□ -0.2
TNFRSF25-208ENST00000453341 RHODO00212 210 aa13.8□□□□□ -0.2
TNFRSF25-208ENST00000453341 RPL19P84098 196 aaKnown RBP13.8□□□□□ -0.2
TNFRSF25-208ENST00000453341 FAM74A4Q5TZK3 123 aa13.8□□□□□ -0.2
TNFRSF25-208ENST00000453341 PRNTQ86SH4 94 aa13.8□□□□□ -0.2
TNFRSF25-208ENST00000453341 ATP6V0CP27449 155 aa13.79□□□□□ -0.2
TNFRSF25-208ENST00000453341 UBE2D3P61077 147 aa13.79□□□□□ -0.2
TNFRSF25-208ENST00000453341 UBE2D2P62837 147 aa13.79□□□□□ -0.2
TNFRSF25-208ENST00000453341 FLI1Q01543 452 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF25-208ENST00000453341 C5orf17Q8NAS9 161 aa13.79□□□□□ -0.2
TNFRSF25-208ENST00000453341 IL36BQ9NZH7 164 aa13.79□□□□□ -0.2
TNFRSF25-208ENST00000453341 A0A087WWL8 130 aa13.78□□□□□ -0.2
TNFRSF25-208ENST00000453341 G3V3Q6 166 aa13.78□□□□□ -0.2
TNFRSF25-208ENST00000453341 H3BVH4 76 aa13.78□□□□□ -0.2
TNFRSF25-208ENST00000453341 GAS8-AS1O95177 125 aa13.78□□□□□ -0.2
TNFRSF25-208ENST00000453341 ANGP03950 147 aaKnown RBP13.78□□□□□ -0.2
TNFRSF25-208ENST00000453341 KRTAP26-1Q6PEX3 210 aa13.78□□□□□ -0.2
TNFRSF25-208ENST00000453341 INO80EQ8NBZ0 244 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF25-208ENST00000453341 LINC01600Q96MT4 127 aa13.78□□□□□ -0.2
TNFRSF25-208ENST00000453341 TNFSF18Q9UNG2 199 aa13.78□□□□□ -0.2
TNFRSF25-208ENST00000453341 ARL14EPLP0DKL9 152 aa13.77□□□□□ -0.21
TNFRSF25-208ENST00000453341 RPL7L1Q6DKI1 246 aaKnown RBP13.77□□□□□ -0.21
TNFRSF25-208ENST00000453341 TRBV6-8A0A0A6YYG3 113 aa13.76□□□□□ -0.21
TNFRSF25-208ENST00000453341 K7EQM0 130 aa13.76□□□□□ -0.21
TNFRSF25-208ENST00000453341 CDC34P49427 236 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF25-208ENST00000453341 PSMG3Q9BT73 122 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF25-208ENST00000453341 DPH3P1Q9H4G8 78 aa13.76□□□□□ -0.21
TNFRSF25-208ENST00000453341 A0A087WYN8 130 aa13.75□□□□□ -0.21
TNFRSF25-208ENST00000453341 TRBV10-1A0A0K0K1A3 114 aa13.75□□□□□ -0.21
TNFRSF25-208ENST00000453341 SMLR1H3BR10 107 aa13.75□□□□□ -0.21
TNFRSF25-208ENST00000453341 CHTF8P0CG12 524 aa13.75□□□□□ -0.21
TNFRSF25-208ENST00000453341 RPL36AP83881 106 aaKnown RBP13.75□□□□□ -0.21
TNFRSF25-208ENST00000453341 MIAQ16674 131 aa13.75□□□□□ -0.21
TNFRSF25-208ENST00000453341 RPL36ALQ969Q0 106 aaKnown RBP13.75□□□□□ -0.21
TNFRSF25-208ENST00000453341 TRBV7-3A0A075B6L6 115 aa13.74□□□□□ -0.21
TNFRSF25-208ENST00000453341 PHOX2AO14813 284 aa13.74□□□□□ -0.21
TNFRSF25-208ENST00000453341 RAB24Q969Q5 203 aa13.74□□□□□ -0.21
TNFRSF25-208ENST00000453341 SFRP2Q96HF1 295 aa13.74□□□□□ -0.21
TNFRSF25-208ENST00000453341 LPAP08519 4548 aa13.74□□□□□ -0.21
TNFRSF25-208ENST00000453341 ARMS2P0C7Q2 107 aa13.73□□□□□ -0.21
TNFRSF25-208ENST00000453341 STAG3L2P0CL84 134 aa13.73□□□□□ -0.21
TNFRSF25-208ENST00000453341 STAG3L3P0CL85 134 aa13.73□□□□□ -0.21
TNFRSF25-208ENST00000453341 SAPCD1Q5SSQ6 148 aa13.73□□□□□ -0.21
TNFRSF25-208ENST00000453341 CLPSL2Q6UWE3 100 aa13.73□□□□□ -0.21
TNFRSF25-208ENST00000453341 OR11H4Q8NGC9 324 aa13.73□□□□□ -0.21
TNFRSF25-208ENST00000453341 SUN5Q8TC36 379 aa13.73□□□□□ -0.21
TNFRSF25-208ENST00000453341 EPDR1Q9UM22 224 aa13.73□□□□□ -0.21
TNFRSF25-208ENST00000453341 B4DEV8 164 aa13.72□□□□□ -0.21
TNFRSF25-208ENST00000453341 CNBPP62633 177 aaKnown RBP13.72□□□□□ -0.21
TNFRSF25-208ENST00000453341 SUMO1P63165 101 aaKnown RBP13.72□□□□□ -0.21
TNFRSF25-208ENST00000453341 SERF2P84101 59 aa13.72□□□□□ -0.21
TNFRSF25-208ENST00000453341 DNLZQ5SXM8 178 aa13.72□□□□□ -0.21
TNFRSF25-208ENST00000453341 PRR34Q9NV39 138 aa13.72□□□□□ -0.21
TNFRSF25-208ENST00000453341 BORCS7-ASMTA0A0B4J1R7 106 aa13.71□□□□□ -0.21
TNFRSF25-208ENST00000453341 FABP5P3A8MUU1 101 aa13.71□□□□□ -0.21
TNFRSF25-208ENST00000453341 ARPC5O15511 151 aa13.71□□□□□ -0.21
TNFRSF25-208ENST00000453341 GCHFRP30047 84 aa13.71□□□□□ -0.21
TNFRSF25-208ENST00000453341 OR10G8Q8NGN5 311 aa13.71□□□□□ -0.21
TNFRSF25-208ENST00000453341 SPACA4Q8TDM5 124 aa13.71□□□□□ -0.21
TNFRSF25-208ENST00000453341 TRAV34A0A0B4J273 112 aa13.7□□□□□ -0.22
TNFRSF25-208ENST00000453341 GRIFINA4D1Z8 144 aa13.7□□□□□ -0.22
TNFRSF25-208ENST00000453341 MBP02144 154 aa13.7□□□□□ -0.22
TNFRSF25-208ENST00000453341 DPH3Q96FX2 82 aa13.7□□□□□ -0.22
TNFRSF25-208ENST00000453341 RNF185Q96GF1 192 aa13.7□□□□□ -0.22
TNFRSF25-208ENST00000453341 KIF25-AS1Q9Y6Z4 181 aa13.7□□□□□ -0.22
TNFRSF25-208ENST00000453341 ARL2-SNX15V9GYD0 113 aa13.7□□□□□ -0.22
TNFRSF25-208ENST00000453341 KRBOX1C9JBD0 128 aa13.69□□□□□ -0.22
TNFRSF25-208ENST00000453341 CRIP1P50238 77 aa13.69□□□□□ -0.22
TNFRSF25-208ENST00000453341 KRTAP10-8P60410 259 aa13.69□□□□□ -0.22
TNFRSF25-208ENST00000453341 CLRN3Q8NCR9 226 aa13.69□□□□□ -0.22
TNFRSF25-208ENST00000453341 CHCHD5Q9BSY4 110 aa13.69□□□□□ -0.22
TNFRSF25-208ENST00000453341 ACTR3CQ9C0K3 210 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF25-208ENST00000453341 A0A0J9YXV3 536 aa13.68□□□□□ -0.22
TNFRSF25-208ENST00000453341 M0R036 132 aa13.68□□□□□ -0.22
TNFRSF25-208ENST00000453341 M0R381 172 aa13.68□□□□□ -0.22
TNFRSF25-208ENST00000453341 SLPIP03973 132 aa13.68□□□□□ -0.22
TNFRSF25-208ENST00000453341 ZNF726P1Q15940 193 aa13.68□□□□□ -0.22
TNFRSF25-208ENST00000453341 CYTL1Q9NRR1 136 aa13.68□□□□□ -0.22
TNFRSF25-208ENST00000453341 IGHV3-64A0A075B6Q5 118 aa13.67□□□□□ -0.22
TNFRSF25-208ENST00000453341 LINC00269Q8N2A0 174 aa13.67□□□□□ -0.22
TNFRSF25-208ENST00000453341 NEXN-AS1Q8NBZ9 246 aa13.67□□□□□ -0.22
TNFRSF25-208ENST00000453341 PLAC8Q9NZF1 115 aa13.67□□□□□ -0.22
TNFRSF25-208ENST00000453341 PHLDA3Q9Y5J5 127 aa13.67□□□□□ -0.22
TNFRSF25-208ENST00000453341 hDV102S1A0JD36 115 aa13.66□□□□□ -0.22
TNFRSF25-208ENST00000453341 CXorf1O96002 111 aa13.66□□□□□ -0.22
TNFRSF25-208ENST00000453341 RBX1P62877 108 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms