RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CBY3A6NI87 242 aa8.72□□□□□ -1.01
VTA1-203ENST00000452973 IGHV3-16A0A0C4DH30 117 aa8.71□□□□□ -1.01
VTA1-203ENST00000452973 LGALS9BQ3B8N2 356 aa8.71□□□□□ -1.01
VTA1-203ENST00000452973 LGALS9CQ6DKI2 356 aa8.71□□□□□ -1.01
VTA1-203ENST00000452973 AMTNQ6UX39 209 aa8.71□□□□□ -1.01
VTA1-203ENST00000452973 CCL24O00175 119 aa8.71□□□□□ -1.02
VTA1-203ENST00000452973 RBMY1A1P0DJD3 496 aaKnown RBP8.71□□□□□ -1.02
VTA1-203ENST00000452973 RBMY1CP0DJD4 496 aa8.71□□□□□ -1.02
VTA1-203ENST00000452973 MED14OSP0DP75 135 aa8.71□□□□□ -1.02
VTA1-203ENST00000452973 RBMY1FQ15415 496 aaKnown RBP8.71□□□□□ -1.02
VTA1-203ENST00000452973 DEFB114Q30KQ6 69 aa8.71□□□□□ -1.02
VTA1-203ENST00000452973 LINC01006Q8NI28 216 aa8.71□□□□□ -1.02
VTA1-203ENST00000452973 CSTL1Q9H114 145 aa8.71□□□□□ -1.02
VTA1-203ENST00000452973 FN1P02751 2386 aaKnown RBP8.7□□□□□ -1.02
VTA1-203ENST00000452973 NMUP48645 174 aa8.7□□□□□ -1.02
VTA1-203ENST00000452973 ZNF56Q15929 161 aa8.7□□□□□ -1.02
VTA1-203ENST00000452973 H3BMM0 161 aa8.7□□□□□ -1.02
VTA1-203ENST00000452973 ZNF876PQ49A33 203 aa8.7□□□□□ -1.02
VTA1-203ENST00000452973 ODF3Q96PU9 254 aa8.7□□□□□ -1.02
VTA1-203ENST00000452973 MPV17L2Q567V2 206 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 MAP6D1Q9H9H5 199 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 MRPS16Q9Y3D3 137 aaKnown RBP8.69□□□□□ -1.02
VTA1-203ENST00000452973 IGHV3-73A0A0B4J1V6 119 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 RBMY1BA6NDE4 496 aaKnown RBP8.69□□□□□ -1.02
VTA1-203ENST00000452973 RBMY1EA6NEQ0 496 aaKnown RBP8.69□□□□□ -1.02
VTA1-203ENST00000452973 LINC01546A6NGU7 62 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 RBMY1DP0C7P1 496 aaKnown RBP8.69□□□□□ -1.02
VTA1-203ENST00000452973 LINC00315P59091 139 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 SUMO4Q6EEV6 95 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 Q6ZVH6 145 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 TMEM160Q9NX00 188 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 KIF25-AS1Q9Y6Z4 181 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 HLA-DRB4P13762 266 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 COL5A1-AS1Q5SY13 56 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 HLA-DRB4X5D2U9 266 aa8.69□□□□□ -1.02
VTA1-203ENST00000452973 IGHV3OR16-12A0A075B7B8 117 aa8.68□□□□□ -1.02
VTA1-203ENST00000452973 ZNF25P17030 456 aaPredicted RBP8.68□□□□□ -1.02
VTA1-203ENST00000452973 ODF1Q14990 250 aa8.68□□□□□ -1.02
VTA1-203ENST00000452973 SYT8Q8NBV8 401 aa8.68□□□□□ -1.02
VTA1-203ENST00000452973 ZNF418Q8TF45 676 aaPredicted RBP8.68□□□□□ -1.02
VTA1-203ENST00000452973 NSUN5P1Q3KNT7 163 aa8.68□□□□□ -1.02
VTA1-203ENST00000452973 C9orf85Q96MD7 179 aa8.68□□□□□ -1.02
VTA1-203ENST00000452973 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
VTA1-203ENST00000452973 ZNF256Q9Y2P7 627 aaPredicted RBP8.68□□□□□ -1.02
VTA1-203ENST00000452973 C20orf78Q9BR46 151 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.67□□□□□ -1.02
VTA1-203ENST00000452973 ATP5LO75964 103 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 NXPH4O95158 308 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
VTA1-203ENST00000452973 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 COX8AP10176 69 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 ORMDL2Q53FV1 153 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 MRPL52Q86TS9 123 aaKnown RBP8.67□□□□□ -1.02
VTA1-203ENST00000452973 GTSCR1Q86UQ5 136 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 PCP2Q8IVA1 136 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 LINC01587Q99440 93 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 TTTY13Q9BZ97 58 aa8.67□□□□□ -1.02
VTA1-203ENST00000452973 RNASE1P07998 156 aaKnown RBP8.66□□□□□ -1.02
VTA1-203ENST00000452973 C2orf66Q6UXQ4 117 aa8.66□□□□□ -1.02
VTA1-203ENST00000452973 TSSC4Q9Y5U2 329 aaPredicted RBP8.66□□□□□ -1.02
VTA1-203ENST00000452973 SAP30O75446 220 aa8.66□□□□□ -1.02
VTA1-203ENST00000452973 IGKCP01834 107 aa8.66□□□□□ -1.02
VTA1-203ENST00000452973 NACAE9PAV3 2078 aa8.66□□□□□ -1.02
VTA1-203ENST00000452973 OTOGQ6ZRI0 2925 aa8.66□□□□□ -1.02
VTA1-203ENST00000452973 SDHAF1A6NFY7 115 aa8.65□□□□□ -1.02
VTA1-203ENST00000452973 TMEM208Q9BTX3 173 aa8.65□□□□□ -1.02
VTA1-203ENST00000452973 TRGV11A0A075B6L2 103 aa8.65□□□□□ -1.02
VTA1-203ENST00000452973 CRYGDP07320 174 aa8.65□□□□□ -1.02
VTA1-203ENST00000452973 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
VTA1-203ENST00000452973 ERASQ7Z444 233 aa8.65□□□□□ -1.02
VTA1-203ENST00000452973 DEFB125Q8N687 156 aa8.65□□□□□ -1.02
VTA1-203ENST00000452973 SPAG8Q99932 426 aaPredicted RBP8.65□□□□□ -1.02
VTA1-203ENST00000452973 ODF3L2Q3SX64 289 aa8.65□□□□□ -1.03
VTA1-203ENST00000452973 IGKV2D-26A0A0A0MRZ7 120 aa8.64□□□□□ -1.03
VTA1-203ENST00000452973 DPM2O94777 84 aa8.64□□□□□ -1.03
VTA1-203ENST00000452973 PPP1R17O96001 155 aa8.64□□□□□ -1.03
VTA1-203ENST00000452973 LY6G6DO95868 133 aa8.64□□□□□ -1.03
VTA1-203ENST00000452973 PROK1P58294 105 aa8.64□□□□□ -1.03
VTA1-203ENST00000452973 RPL39P62891 51 aaKnown RBP8.64□□□□□ -1.03
VTA1-203ENST00000452973 STHQ8IWL8 128 aa8.64□□□□□ -1.03
VTA1-203ENST00000452973 KIR2DL4Q99706 377 aa8.64□□□□□ -1.03
VTA1-203ENST00000452973 HHLA3Q9XRX5 114 aa8.64□□□□□ -1.03
VTA1-203ENST00000452973 FHL3Q13643 280 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 TOMM6Q96B49 74 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 C2CD3Q4AC94 2353 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 P0DMU3 169 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 FAM231AP0DMU4 169 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 FAM231CP0DMU5 169 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 HILS1P60008 231 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 SCGB2A2Q13296 93 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 C2orf91Q6ZV80 131 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 TP53TG1Q9Y2A0 90 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 OR11H12B2RN74 326 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 EMP1P54849 157 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 WFDC10AQ9H1F0 79 aa8.63□□□□□ -1.03
VTA1-203ENST00000452973 ANK3Q12955 4377 aaKnown RBP8.63□□□□□ -1.03
VTA1-203ENST00000452973 M0QY20 66 aa8.62□□□□□ -1.03
VTA1-203ENST00000452973 FGF6P10767 208 aa8.62□□□□□ -1.03
VTA1-203ENST00000452973 A0A087WX48 190 aa8.62□□□□□ -1.03
VTA1-203ENST00000452973 TRAV2A0A0B4J234 112 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms