RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 NAT8BQ9UHF3 227 aa8.35□□□□□ -1.07
LINC00339-205ENST00000452322 PRO0255Q9UI72 69 aa8.35□□□□□ -1.07
LINC00339-205ENST00000452322 TRAV26-1A0A087WT03 109 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 H3BNG1 76 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 CRYGDP07320 174 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 NTF3P20783 257 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 CRYBA4P53673 196 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 SSTP61278 116 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 UFSP1Q6NVU6 142 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 BORCS7Q96B45 105 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 SAMD10Q9BYL1 202 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 HHLA3Q9XRX5 114 aa8.34□□□□□ -1.07
LINC00339-205ENST00000452322 TENM2Q9NT68 2774 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 LYSTQ99698 3801 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 A0A087WWL8 130 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 IGHV3-73A0A0B4J1V6 119 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 TRGC1P0CF51 173 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 GATA1P15976 413 aaPredicted RBP8.33□□□□□ -1.08
LINC00339-205ENST00000452322 TWIST1Q15672 202 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 FAM74A4Q5TZK3 123 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 SLC7A5P1Q8MH63 180 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 C15orf53Q8NAA6 179 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 NUP35Q8NFH5 326 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 VSIG2Q96IQ7 327 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 MSRB1Q9NZV6 116 aa8.33□□□□□ -1.08
LINC00339-205ENST00000452322 A0A0J9YY99 117 aa8.32□□□□□ -1.08
LINC00339-205ENST00000452322 A0A1B0GUT8 65 aa8.32□□□□□ -1.08
LINC00339-205ENST00000452322 TRBV6-4A0A1B0GX49 114 aa8.32□□□□□ -1.08
LINC00339-205ENST00000452322 SMIM17P0DL12 118 aa8.32□□□□□ -1.08
LINC00339-205ENST00000452322 C14orf178Q8N769 122 aaPredicted RBP8.32□□□□□ -1.08
LINC00339-205ENST00000452322 CTDSP1Q9GZU7 261 aa8.32□□□□□ -1.08
LINC00339-205ENST00000452322 APLNQ9ULZ1 77 aa8.32□□□□□ -1.08
LINC00339-205ENST00000452322 KIF25-AS1Q9Y6Z4 181 aa8.32□□□□□ -1.08
LINC00339-205ENST00000452322 PAX4O43316 350 aa8.31□□□□□ -1.08
LINC00339-205ENST00000452322 APOC3P02656 99 aa8.31□□□□□ -1.08
LINC00339-205ENST00000452322 RHEBQ15382 184 aa8.31□□□□□ -1.08
LINC00339-205ENST00000452322 RHOHQ15669 191 aa8.31□□□□□ -1.08
LINC00339-205ENST00000452322 SLC25A29Q8N8R3 303 aa8.31□□□□□ -1.08
LINC00339-205ENST00000452322 CLRN3Q8NCR9 226 aa8.31□□□□□ -1.08
LINC00339-205ENST00000452322 EVI2AP22794 236 aa8.3□□□□□ -1.08
LINC00339-205ENST00000452322 RIGQ13278 110 aa8.3□□□□□ -1.08
LINC00339-205ENST00000452322 SMIM15Q7Z3B0 74 aa8.3□□□□□ -1.08
LINC00339-205ENST00000452322 SVBPQ8N300 66 aa8.3□□□□□ -1.08
LINC00339-205ENST00000452322 DPH3P1Q9H4G8 78 aa8.3□□□□□ -1.08
LINC00339-205ENST00000452322 A0A087WWC5 75 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 C7orf77A4D0Y5 90 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 K7EQD1 137 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 SNAPINO95295 136 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 NUDT3O95989 172 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 LINC00315P59091 139 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 RAB4BP61018 213 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 ZNF56Q15929 161 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 Q6ZSN1 163 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 IMMP2LQ96T52 175 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 PRADC1Q9BSG0 188 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 TMEM242Q9NWH2 141 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
LINC00339-205ENST00000452322 A0A1B0GW15 77 aa8.28□□□□□ -1.08
LINC00339-205ENST00000452322 GYPEP15421 78 aa8.28□□□□□ -1.08
LINC00339-205ENST00000452322 ICOSQ9Y6W8 199 aa8.28□□□□□ -1.08
LINC00339-205ENST00000452322 KMT2CQ8NEZ4 4911 aaKnown RBP8.27□□□□□ -1.08
LINC00339-205ENST00000452322 A0A096LPF7 62 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 TRBV10-1A0A0K0K1A3 114 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 F5H697 171 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 MGPP08493 103 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 FAM3BP58499 235 aaPredicted RBP8.27□□□□□ -1.09
LINC00339-205ENST00000452322 MRPL23Q16540 153 aaKnown RBP8.27□□□□□ -1.09
LINC00339-205ENST00000452322 KCNIP4Q6PIL6 250 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 ATP5L2Q7Z4Y8 100 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 TMEM191AQ9H0A3 160 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 RPS10P5Q9NQ39 176 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 DNAH1Q9P2D7 4330 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 SACSQ9NZJ4 4579 aa8.27□□□□□ -1.09
LINC00339-205ENST00000452322 LOC100131303A0A0U1RQF7 123 aa8.26□□□□□ -1.09
LINC00339-205ENST00000452322 A0A1B0GXF2 115 aa8.26□□□□□ -1.09
LINC00339-205ENST00000452322 S100A8P05109 93 aa8.26□□□□□ -1.09
LINC00339-205ENST00000452322 SRIP30626 198 aa8.26□□□□□ -1.09
LINC00339-205ENST00000452322 HBBP68871 147 aa8.26□□□□□ -1.09
LINC00339-205ENST00000452322 MRPL54Q6P161 138 aaKnown RBP8.26□□□□□ -1.09
LINC00339-205ENST00000452322 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
LINC00339-205ENST00000452322 H7C1H1 209 aa8.25□□□□□ -1.09
LINC00339-205ENST00000452322 P0DMU3 169 aa8.25□□□□□ -1.09
LINC00339-205ENST00000452322 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
LINC00339-205ENST00000452322 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
LINC00339-205ENST00000452322 CAMPP49913 170 aa8.25□□□□□ -1.09
LINC00339-205ENST00000452322 SUMO4Q6EEV6 95 aa8.25□□□□□ -1.09
LINC00339-205ENST00000452322 SH2D6Q7Z4S9 175 aa8.25□□□□□ -1.09
LINC00339-205ENST00000452322 BTF3L4Q96K17 158 aa8.25□□□□□ -1.09
LINC00339-205ENST00000452322 TRAV9-1A0A075B6T8 112 aa8.24□□□□□ -1.09
LINC00339-205ENST00000452322 M0QY20 66 aa8.24□□□□□ -1.09
LINC00339-205ENST00000452322 LINC00694P0DN24 101 aa8.24□□□□□ -1.09
LINC00339-205ENST00000452322 S100PP25815 95 aa8.24□□□□□ -1.09
LINC00339-205ENST00000452322 LGALS9CQ6DKI2 356 aa8.24□□□□□ -1.09
LINC00339-205ENST00000452322 NEGR1Q7Z3B1 354 aa8.24□□□□□ -1.09
LINC00339-205ENST00000452322 GATD1Q8NB37 220 aa8.24□□□□□ -1.09
LINC00339-205ENST00000452322 FRZBQ92765 325 aa8.24□□□□□ -1.09
LINC00339-205ENST00000452322 GAGE12JA6NER3 117 aa8.23□□□□□ -1.09
LINC00339-205ENST00000452322 LCE2BO14633 110 aa8.23□□□□□ -1.09
LINC00339-205ENST00000452322 RPL36AP83881 106 aaKnown RBP8.23□□□□□ -1.09
LINC00339-205ENST00000452322 GAGE1Q13065 139 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms