RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 ZFP69Q49AA0 526 aa11.16□□□□□ -0.62
PTPRN-209ENST00000451506 C14orf178Q8N769 122 aaPredicted RBP11.16□□□□□ -0.62
PTPRN-209ENST00000451506 STOML3Q8TAV4 291 aa11.16□□□□□ -0.62
PTPRN-209ENST00000451506 RMI2Q96E14 147 aa11.16□□□□□ -0.62
PTPRN-209ENST00000451506 SAMD10Q9BYL1 202 aa11.16□□□□□ -0.62
PTPRN-209ENST00000451506 MAP1LC3BQ9GZQ8 125 aa11.16□□□□□ -0.62
PTPRN-209ENST00000451506 IGKV3D-20A0A0C4DH25 116 aa11.15□□□□□ -0.62
PTPRN-209ENST00000451506 UMAD1C9J7I0 102 aa11.15□□□□□ -0.62
PTPRN-209ENST00000451506 PRNTQ86SH4 94 aa11.15□□□□□ -0.62
PTPRN-209ENST00000451506 NIT1Q86X76 327 aa11.15□□□□□ -0.62
PTPRN-209ENST00000451506 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
PTPRN-209ENST00000451506 JPT2Q9H910 190 aa11.15□□□□□ -0.62
PTPRN-209ENST00000451506 EPDR1Q9UM22 224 aa11.15□□□□□ -0.62
PTPRN-209ENST00000451506 ARL2-SNX15V9GYD0 113 aa11.15□□□□□ -0.62
PTPRN-209ENST00000451506 IGKV2D-24A0A075B6R9 120 aa11.14□□□□□ -0.63
PTPRN-209ENST00000451506 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
PTPRN-209ENST00000451506 FGF8P55075 233 aaPredicted RBP11.14□□□□□ -0.63
PTPRN-209ENST00000451506 SUMO1P63165 101 aaKnown RBP11.14□□□□□ -0.63
PTPRN-209ENST00000451506 LGALSLQ3ZCW2 172 aaPredicted RBP11.14□□□□□ -0.63
PTPRN-209ENST00000451506 PFDN1O60925 122 aa11.13□□□□□ -0.63
PTPRN-209ENST00000451506 IGLV2-8P01709 118 aa11.13□□□□□ -0.63
PTPRN-209ENST00000451506 SAPCD1Q5SSQ6 148 aa11.13□□□□□ -0.63
PTPRN-209ENST00000451506 OR11H4Q8NGC9 324 aa11.13□□□□□ -0.63
PTPRN-209ENST00000451506 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
PTPRN-209ENST00000451506 ZNF471Q9BX82 626 aaPredicted RBP11.13□□□□□ -0.63
PTPRN-209ENST00000451506 KLK12Q9UKR0 248 aa11.13□□□□□ -0.63
PTPRN-209ENST00000451506 URGCP-MRPS24S4R325 110 aa11.13□□□□□ -0.63
PTPRN-209ENST00000451506 IFNA7P01567 189 aa11.12□□□□□ -0.63
PTPRN-209ENST00000451506 S100A4P26447 101 aaKnown RBP11.12□□□□□ -0.63
PTPRN-209ENST00000451506 ATRAIDQ6UW56 229 aa11.12□□□□□ -0.63
PTPRN-209ENST00000451506 IL36BQ9NZH7 164 aa11.12□□□□□ -0.63
PTPRN-209ENST00000451506 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
PTPRN-209ENST00000451506 FAM74A7A6NL05 159 aa11.11□□□□□ -0.63
PTPRN-209ENST00000451506 PEX7O00628 323 aa11.11□□□□□ -0.63
PTPRN-209ENST00000451506 TPT1P13693 172 aaKnown RBP11.11□□□□□ -0.63
PTPRN-209ENST00000451506 ASIPP42127 132 aa11.11□□□□□ -0.63
PTPRN-209ENST00000451506 FHITP49789 147 aa11.11□□□□□ -0.63
PTPRN-209ENST00000451506 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
PTPRN-209ENST00000451506 TCTE3Q8IZS6 198 aa11.11□□□□□ -0.63
PTPRN-209ENST00000451506 UBE2WQ96B02 151 aa11.11□□□□□ -0.63
PTPRN-209ENST00000451506 UBE2G2P60604 165 aa11.1□□□□□ -0.63
PTPRN-209ENST00000451506 FABP5P3A8MUU1 101 aa11.09□□□□□ -0.63
PTPRN-209ENST00000451506 RHODO00212 210 aa11.09□□□□□ -0.63
PTPRN-209ENST00000451506 EIF5AL1Q6IS14 154 aaKnown RBP11.09□□□□□ -0.63
PTPRN-209ENST00000451506 Q86TA4 180 aa11.09□□□□□ -0.63
PTPRN-209ENST00000451506 FAM213BQ8TBF2 198 aa11.09□□□□□ -0.63
PTPRN-209ENST00000451506 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
PTPRN-209ENST00000451506 A0A087WX48 190 aa11.08□□□□□ -0.64
PTPRN-209ENST00000451506 TRAV34A0A0B4J273 112 aa11.08□□□□□ -0.64
PTPRN-209ENST00000451506 H3BVH4 76 aa11.08□□□□□ -0.64
PTPRN-209ENST00000451506 ELOBQ15370 118 aa11.08□□□□□ -0.64
PTPRN-209ENST00000451506 DNLZQ5SXM8 178 aa11.08□□□□□ -0.64
PTPRN-209ENST00000451506 TMUB2Q71RG4 321 aa11.08□□□□□ -0.64
PTPRN-209ENST00000451506 FMC1Q96HJ9 113 aa11.08□□□□□ -0.64
PTPRN-209ENST00000451506 B4DEV8 164 aa11.07□□□□□ -0.64
PTPRN-209ENST00000451506 MBD3L1Q8WWY6 194 aa11.07□□□□□ -0.64
PTPRN-209ENST00000451506 PKHD1L1Q86WI1 4243 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 KRBOX1C9JBD0 128 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 ARMS2P0C7Q2 107 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 CRIP1P50238 77 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 RAB5CP51148 216 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 HNRNPA3P51991 378 aaKnown RBP11.06□□□□□ -0.64
PTPRN-209ENST00000451506 UBE2G1P62253 170 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 Q0VG73 95 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 FAM74A4Q5TZK3 123 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 CST9LP1Q5W188 147 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 Q6ZNX1 250 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 SFT2D1Q8WV19 159 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 ZFP30Q9Y2G7 519 aa11.06□□□□□ -0.64
PTPRN-209ENST00000451506 A0A087WWL8 130 aa11.05□□□□□ -0.64
PTPRN-209ENST00000451506 TRBV6-1A0A0K0K1D8 114 aa11.05□□□□□ -0.64
PTPRN-209ENST00000451506 RPL37AP61513 92 aaKnown RBP11.05□□□□□ -0.64
PTPRN-209ENST00000451506 C14orf177Q52M58 125 aa11.05□□□□□ -0.64
PTPRN-209ENST00000451506 ENHOQ6UWT2 76 aa11.05□□□□□ -0.64
PTPRN-209ENST00000451506 DAZAP1Q96EP5 407 aaKnown RBP11.05□□□□□ -0.64
PTPRN-209ENST00000451506 SFRP2Q96HF1 295 aa11.05□□□□□ -0.64
PTPRN-209ENST00000451506 TRBV10-1A0A0K0K1A3 114 aa11.04□□□□□ -0.64
PTPRN-209ENST00000451506 TEX46H3BTG2 121 aa11.04□□□□□ -0.64
PTPRN-209ENST00000451506 S100A9P06702 114 aaKnown RBP11.04□□□□□ -0.64
PTPRN-209ENST00000451506 H2AFB1P0C5Y9 115 aa11.04□□□□□ -0.64
PTPRN-209ENST00000451506 AKR1C3P42330 323 aa11.04□□□□□ -0.64
PTPRN-209ENST00000451506 UBE2D3P61077 147 aa11.04□□□□□ -0.64
PTPRN-209ENST00000451506 UBE2D2P62837 147 aa11.04□□□□□ -0.64
PTPRN-209ENST00000451506 KCNIP4Q6PIL6 250 aa11.04□□□□□ -0.64
PTPRN-209ENST00000451506 COX8CQ7Z4L0 72 aa11.04□□□□□ -0.64
PTPRN-209ENST00000451506 C1orf43Q9BWL3 253 aa11.04□□□□□ -0.64
PTPRN-209ENST00000451506 GRIFINA4D1Z8 144 aa11.03□□□□□ -0.64
PTPRN-209ENST00000451506 M0R036 132 aa11.03□□□□□ -0.64
PTPRN-209ENST00000451506 AKAP14Q86UN6 197 aa11.03□□□□□ -0.64
PTPRN-209ENST00000451506 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
PTPRN-209ENST00000451506 MANBALQ9NQG1 85 aa11.03□□□□□ -0.64
PTPRN-209ENST00000451506 TRBV7-3A0A075B6L6 115 aa11.02□□□□□ -0.65
PTPRN-209ENST00000451506 PAGE4O60829 102 aa11.02□□□□□ -0.65
PTPRN-209ENST00000451506 SH2D1AO60880 128 aa11.02□□□□□ -0.65
PTPRN-209ENST00000451506 RPL36AP83881 106 aaKnown RBP11.02□□□□□ -0.65
PTPRN-209ENST00000451506 RPL36ALQ969Q0 106 aaKnown RBP11.02□□□□□ -0.65
PTPRN-209ENST00000451506 PHLDA3Q9Y5J5 127 aa11.02□□□□□ -0.65
PTPRN-209ENST00000451506 TRAV1-1A0A0B4J248 108 aa11.01□□□□□ -0.65
PTPRN-209ENST00000451506 USP17L23D6RBM5 183 aa11.01□□□□□ -0.65
PTPRN-209ENST00000451506 M0R381 172 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms