RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 GATA1P15976 413 aaPredicted RBP4.84□□□□□ -1.64
USP46-202ENST00000451218 HIST1H1AQ02539 215 aaPredicted RBP4.84□□□□□ -1.64
USP46-202ENST00000451218 DEFB121Q5J5C9 76 aa4.84□□□□□ -1.64
USP46-202ENST00000451218 MTORP42345 2549 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 NCR2O95944 276 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 NPYP01303 97 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 OR9G4Q8NGQ1 327 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 SIGLEC8Q9NYZ4 499 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 BAHCC1Q9P281 2608 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 TMSB15BA0A087X1C1 80 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 FABP5P3A8MUU1 101 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 SMKR1H3BMG3 65 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 NUDT3O95989 172 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 C3orf79P0CE67 100 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 FA2HQ7L5A8 372 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 NIT2Q9NQR4 276 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 TP73-AS1Q9UF72 201 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 NDUFA7O95182 113 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 KRTDAPP60985 99 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 RIGQ13278 110 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 DEFB114Q30KQ6 69 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 ODF3L2Q3SX64 289 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 TMEM61Q8N0U2 210 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 LINC00477Q96M19 166 aa4.83□□□□□ -1.64
USP46-202ENST00000451218 TMEM189A5PLL7 270 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 D6R8Y8 96 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 GNRH2O43555 120 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 PRM2P04554 102 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 FER1L6-AS1Q8NA97 138 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 OR11H1Q8NG94 326 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 TRAV2A0A0B4J234 112 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 APOMO95445 188 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 ANXA2RQ3ZCQ2 193 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 PRSS3P2Q8NHM4 247 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 H3BRM9 83 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 OVOL1O14753 267 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 TMEM78Q5T7P6 136 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 NXT2Q9NPJ8 142 aaKnown RBP4.82□□□□□ -1.64
USP46-202ENST00000451218 TEP1Q99973 2627 aaKnown RBP4.82□□□□□ -1.64
USP46-202ENST00000451218 LINC01619G3V211 115 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 MED14OSP0DP75 135 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 EVI2AP22794 236 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 APOC4P55056 127 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 C11orf72Q8NBR9 251 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 TMEM70Q9BUB7 260 aa4.82□□□□□ -1.64
USP46-202ENST00000451218 DNAH10Q8IVF4 4471 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 IGHV3-16A0A0C4DH30 117 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 A0A1B0GW15 77 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 PLAC8L1A1L4L8 177 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 MALP21145 153 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 IFI27P40305 119 aaPredicted RBP4.81□□□□□ -1.64
USP46-202ENST00000451218 RASL10AQ92737 203 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 C14orf144Q96I85 54 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 TRAV8-6A0A0B4J262 113 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 TCF21O43680 179 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 ZNF738Q8NE65 137 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 TRAV26-2A0A0B4J265 109 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 TWIST1Q15672 202 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 SPAG8Q99932 426 aaPredicted RBP4.81□□□□□ -1.64
USP46-202ENST00000451218 MAP6D1Q9H9H5 199 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 H3BMM0 161 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 SCGB1C2P0DMR2 95 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 SH2D6Q7Z4S9 175 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 JPT2Q9H910 190 aa4.81□□□□□ -1.64
USP46-202ENST00000451218 CD300EQ496F6 205 aaPredicted RBP4.8□□□□□ -1.64
USP46-202ENST00000451218 CSNK1G2-AS1Q8NCQ2 148 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 CHCHD1Q96BP2 118 aaKnown RBP4.8□□□□□ -1.64
USP46-202ENST00000451218 PRADC1Q9BSG0 188 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 Q9UF83 564 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 CBY3A6NI87 242 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 HLA-DRB4P13762 266 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 OR1N2Q8NGR9 330 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 HLA-DRB4X5D2U9 266 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 TRAV12-2A0A075B6T6 113 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 M0R2Z0 102 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 LINC00467Q9BRT7 94 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 PAM16Q9Y3D7 125 aa4.8□□□□□ -1.64
USP46-202ENST00000451218 SCGB1D1O95968 90 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 LINC00614P0C842 121 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 SEC11AP67812 179 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 BEAN1Q3B7T3 259 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 IGKV3-7A0A075B6H7 116 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 ZNF747Q9BV97 191 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 MAST4O15021 2626 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 H3BVH4 76 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 LEPP41159 167 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 FOXI2Q6ZQN5 318 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 KLHL30-AS1Q8NEE0 82 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 SORL1Q92673 2214 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 INAFM1C9JVW0 142 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 CRYGDP07320 174 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 TM2D2Q9BX73 214 aa4.79□□□□□ -1.64
USP46-202ENST00000451218 KNCNA6PVL3 124 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 LINC01545Q5VT33 79 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 Q8N1Y9 231 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 PHLDA1Q8WV24 401 aaPredicted RBP4.78□□□□□ -1.64
USP46-202ENST00000451218 C20orf144Q9BQM9 153 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 C2orf88Q9BSF0 95 aa4.78□□□□□ -1.64
USP46-202ENST00000451218 IGLV1-51P01701 117 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms