RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 TRAV8-6A0A0B4J262 113 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 GAGE12JA6NER3 117 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 RPL35P42766 123 aaKnown RBP11.87□□□□□ -0.51
FAM3A-216ENST00000449971 GAGE1Q13065 139 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 GAGE4Q13068 117 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 GAGE5Q13069 117 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 GAGE13Q4V321 117 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 OR10J3Q5JRS4 329 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 PRR27Q6MZM9 219 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 NFE4Q86UQ8 179 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 MLST8Q9BVC4 326 aa11.87□□□□□ -0.51
FAM3A-216ENST00000449971 IGHV3-38A0A0C4DH36 116 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 K7EP13 123 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 RHODO00212 210 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 CRYGDP07320 174 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 XGP55808 180 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 RPL19P84098 196 aaKnown RBP11.86□□□□□ -0.51
FAM3A-216ENST00000449971 FAM74A4Q5TZK3 123 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 UFSP1Q6NVU6 142 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 Q6ZRN7 208 aaPredicted RBP11.86□□□□□ -0.51
FAM3A-216ENST00000449971 ZFP82Q8N141 532 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 SFRP2Q96HF1 295 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 GTSF1LQ9H1H1 148 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 MSRB1Q9NZV6 116 aa11.86□□□□□ -0.51
FAM3A-216ENST00000449971 A0A087WWL8 130 aa11.85□□□□□ -0.51
FAM3A-216ENST00000449971 SMR3BP02814 79 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-216ENST00000449971 C14orf178Q8N769 122 aaPredicted RBP11.85□□□□□ -0.51
FAM3A-216ENST00000449971 C11orf52Q96A22 123 aa11.85□□□□□ -0.51
FAM3A-216ENST00000449971 DERL1Q9BUN8 251 aa11.85□□□□□ -0.51
FAM3A-216ENST00000449971 SRRM2Q9UQ35 2752 aaKnown RBP11.84□□□□□ -0.51
FAM3A-216ENST00000449971 IFNA1P01562 189 aa11.84□□□□□ -0.51
FAM3A-216ENST00000449971 LELP1Q5T871 98 aa11.84□□□□□ -0.51
FAM3A-216ENST00000449971 C10orf126Q8N4M7 172 aa11.84□□□□□ -0.51
FAM3A-216ENST00000449971 Q9UF83 564 aa11.84□□□□□ -0.51
FAM3A-216ENST00000449971 EREGO14944 169 aa11.83□□□□□ -0.52
FAM3A-216ENST00000449971 C9orf62Q8N4C0 152 aa11.83□□□□□ -0.52
FAM3A-216ENST00000449971 PGPEP1Q9NXJ5 209 aa11.83□□□□□ -0.52
FAM3A-216ENST00000449971 IGHV3-30P01768 117 aa11.82□□□□□ -0.52
FAM3A-216ENST00000449971 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
FAM3A-216ENST00000449971 IGHV3-30-3P0DP02 117 aa11.82□□□□□ -0.52
FAM3A-216ENST00000449971 IGHV3-30-5P0DP03 117 aa11.82□□□□□ -0.52
FAM3A-216ENST00000449971 HAMPP81172 84 aa11.82□□□□□ -0.52
FAM3A-216ENST00000449971 MEF2BQ02080 365 aaPredicted RBP11.82□□□□□ -0.52
FAM3A-216ENST00000449971 CENPWQ5EE01 88 aa11.82□□□□□ -0.52
FAM3A-216ENST00000449971 LINC01556Q5JQF7 62 aa11.82□□□□□ -0.52
FAM3A-216ENST00000449971 MED9Q9NWA0 146 aa11.82□□□□□ -0.52
FAM3A-216ENST00000449971 BOLA1Q9Y3E2 137 aa11.82□□□□□ -0.52
FAM3A-216ENST00000449971 MUC21A0A0G2JKD1 596 aa11.81□□□□□ -0.52
FAM3A-216ENST00000449971 MUC21A0A140T8X8 626 aa11.81□□□□□ -0.52
FAM3A-216ENST00000449971 RAB19A4D1S5 217 aa11.81□□□□□ -0.52
FAM3A-216ENST00000449971 PDE6DO43924 150 aa11.81□□□□□ -0.52
FAM3A-216ENST00000449971 CXCL1P09341 107 aa11.81□□□□□ -0.52
FAM3A-216ENST00000449971 ERVFC1-1P60608 527 aa11.81□□□□□ -0.52
FAM3A-216ENST00000449971 OR10AG1Q8NH19 301 aa11.81□□□□□ -0.52
FAM3A-216ENST00000449971 DAZAP1Q96EP5 407 aaKnown RBP11.81□□□□□ -0.52
FAM3A-216ENST00000449971 J3QL48 77 aa11.8□□□□□ -0.52
FAM3A-216ENST00000449971 LINC00694P0DN24 101 aa11.8□□□□□ -0.52
FAM3A-216ENST00000449971 BCL2P10415 239 aa11.8□□□□□ -0.52
FAM3A-216ENST00000449971 KRTAP10-1P60331 282 aa11.8□□□□□ -0.52
FAM3A-216ENST00000449971 SSTP61278 116 aa11.8□□□□□ -0.52
FAM3A-216ENST00000449971 SPANXN1Q5VSR9 72 aa11.8□□□□□ -0.52
FAM3A-216ENST00000449971 VAX2Q9UIW0 290 aa11.8□□□□□ -0.52
FAM3A-216ENST00000449971 GNG4P50150 75 aa11.79□□□□□ -0.52
FAM3A-216ENST00000449971 SSBP4Q9BWG4 385 aaPredicted RBP11.79□□□□□ -0.52
FAM3A-216ENST00000449971 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
FAM3A-216ENST00000449971 SNAI2O43623 268 aa11.78□□□□□ -0.52
FAM3A-216ENST00000449971 IGLV2-8P01709 118 aa11.78□□□□□ -0.52
FAM3A-216ENST00000449971 OR5AL1P0C617 328 aa11.78□□□□□ -0.52
FAM3A-216ENST00000449971 A0A087WWC5 75 aa11.77□□□□□ -0.53
FAM3A-216ENST00000449971 ALKAL2Q6UX46 152 aa11.77□□□□□ -0.53
FAM3A-216ENST00000449971 OR2D3Q8NGH3 330 aa11.77□□□□□ -0.53
FAM3A-216ENST00000449971 Q9HAA7 133 aa11.77□□□□□ -0.53
FAM3A-216ENST00000449971 A0A087WTM6 91 aa11.76□□□□□ -0.53
FAM3A-216ENST00000449971 TRBV10-1A0A0K0K1A3 114 aa11.76□□□□□ -0.53
FAM3A-216ENST00000449971 PSCAO43653 123 aa11.76□□□□□ -0.53
FAM3A-216ENST00000449971 GZMBP10144 247 aa11.76□□□□□ -0.53
FAM3A-216ENST00000449971 TAGLN2P37802 199 aaKnown RBP11.76□□□□□ -0.53
FAM3A-216ENST00000449971 RPS20P60866 119 aaKnown RBP11.76□□□□□ -0.53
FAM3A-216ENST00000449971 RAB4BP61018 213 aa11.76□□□□□ -0.53
FAM3A-216ENST00000449971 RPL36AP83881 106 aaKnown RBP11.76□□□□□ -0.53
FAM3A-216ENST00000449971 ZNF56Q15929 161 aa11.76□□□□□ -0.53
FAM3A-216ENST00000449971 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
FAM3A-216ENST00000449971 RPL36ALQ969Q0 106 aaKnown RBP11.76□□□□□ -0.53
FAM3A-216ENST00000449971 SMIM12Q96EX1 92 aa11.76□□□□□ -0.53
FAM3A-216ENST00000449971 TPPP3Q9BW30 176 aa11.76□□□□□ -0.53
FAM3A-216ENST00000449971 C19orf71A6NCJ1 209 aa11.75□□□□□ -0.53
FAM3A-216ENST00000449971 F5H697 171 aa11.75□□□□□ -0.53
FAM3A-216ENST00000449971 FAM229AH3BQW9 127 aa11.75□□□□□ -0.53
FAM3A-216ENST00000449971 BLOC1S1P78537 153 aa11.75□□□□□ -0.53
FAM3A-216ENST00000449971 TRBV20OR9-2A0A075B6H5 130 aa11.74□□□□□ -0.53
FAM3A-216ENST00000449971 RBFOX3A6NFN3 312 aa11.74□□□□□ -0.53
FAM3A-216ENST00000449971 P01737 135 aa11.74□□□□□ -0.53
FAM3A-216ENST00000449971 Q8N3U1 123 aa11.74□□□□□ -0.53
FAM3A-216ENST00000449971 FER1L6-AS1Q8NA97 138 aa11.74□□□□□ -0.53
FAM3A-216ENST00000449971 BIN3Q9NQY0 253 aa11.74□□□□□ -0.53
FAM3A-216ENST00000449971 TRBV7-3A0A075B6L6 115 aa11.73□□□□□ -0.53
FAM3A-216ENST00000449971 A0A1B0GVG6 124 aa11.73□□□□□ -0.53
FAM3A-216ENST00000449971 SMIM17P0DL12 118 aa11.73□□□□□ -0.53
FAM3A-216ENST00000449971 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
FAM3A-216ENST00000449971 XKRY2A2RUG3 117 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms