RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 PMVKQ15126 192 aa10.27□□□□□ -0.77
SYNGAP1-204ENST00000449372 SVEP1Q4LDE5 3571 aa10.27□□□□□ -0.77
SYNGAP1-204ENST00000449372 ASH1LQ9NR48 2969 aaKnown RBP10.26□□□□□ -0.77
SYNGAP1-204ENST00000449372 CACNA1AO00555 2505 aa10.26□□□□□ -0.77
SYNGAP1-204ENST00000449372 CSMD1Q96PZ7 3565 aa10.26□□□□□ -0.77
SYNGAP1-204ENST00000449372 TRAV26-2A0A0B4J265 109 aa10.26□□□□□ -0.77
SYNGAP1-204ENST00000449372 UQCRQO14949 82 aa10.26□□□□□ -0.77
SYNGAP1-204ENST00000449372 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
SYNGAP1-204ENST00000449372 Q6ZS46 218 aa10.26□□□□□ -0.77
SYNGAP1-204ENST00000449372 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
SYNGAP1-204ENST00000449372 FAM110DQ8TAY7 271 aaPredicted RBP10.26□□□□□ -0.77
SYNGAP1-204ENST00000449372 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
SYNGAP1-204ENST00000449372 Q8TAT8 98 aa10.25□□□□□ -0.77
SYNGAP1-204ENST00000449372 ITLN2Q8WWU7 325 aaPredicted RBP10.25□□□□□ -0.77
SYNGAP1-204ENST00000449372 PRB3Q04118 309 aaPredicted RBP10.25□□□□□ -0.77
SYNGAP1-204ENST00000449372 Q1RN00 199 aa10.25□□□□□ -0.77
SYNGAP1-204ENST00000449372 MRAPQ8TCY5 172 aa10.25□□□□□ -0.77
SYNGAP1-204ENST00000449372 ZFHX3Q15911 3703 aa10.25□□□□□ -0.77
SYNGAP1-204ENST00000449372 MALRD1Q5VYJ5 2156 aa10.25□□□□□ -0.77
SYNGAP1-204ENST00000449372 IGHV3-33P01772 117 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 C2orf82Q6UX34 121 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 DUX3Q96PT4 197 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 ELANEP08246 267 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 P0DMU3 169 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 FAM231AP0DMU4 169 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 FAM231CP0DMU5 169 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 BEX4Q9NWD9 120 aaPredicted RBP10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 ZNF575Q86XF7 245 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 LINC00526Q96FQ7 95 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 HIVEP3Q5T1R4 2406 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 NCOR2Q9Y618 2525 aa10.24□□□□□ -0.77
SYNGAP1-204ENST00000449372 GAGE2AQ6NT46 116 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 C9orf139Q6ZV77 190 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 NRACQ8N912 160 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 TRBV7-1A0A0A6YYK4 115 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 TMEM219Q86XT9 240 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 POM121L12Q8N7R1 296 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 ZNF256Q9Y2P7 627 aaPredicted RBP10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 ODF3BA8MYP8 253 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 EBI3Q14213 229 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 SLC25A29Q8N8R3 303 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 S4R3C0 116 aa10.23□□□□□ -0.77
SYNGAP1-204ENST00000449372 TRGV3P03979 118 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 RPS28P62857 69 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 C16orf92Q96LL3 132 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 LINC00477Q96M19 166 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 SPTA1P02549 2419 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 TRAV21A0A0B4J279 112 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 VMO1Q7Z5L0 202 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 CFHR4Q92496 578 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 OVOL1O14753 267 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 SMIM2Q9BVW6 85 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 C1orf43Q9BWL3 253 aa10.22□□□□□ -0.77
SYNGAP1-204ENST00000449372 FAM240AA0A1B0GVK7 77 aa10.21□□□□□ -0.77
SYNGAP1-204ENST00000449372 F8WDY8 70 aa10.21□□□□□ -0.77
SYNGAP1-204ENST00000449372 C19orf84I3L1E1 186 aa10.21□□□□□ -0.77
SYNGAP1-204ENST00000449372 CTSGP08311 255 aa10.21□□□□□ -0.78
SYNGAP1-204ENST00000449372 IL17RELQ6ZVW7 336 aa10.21□□□□□ -0.78
SYNGAP1-204ENST00000449372 LINC01600Q96MT4 127 aa10.21□□□□□ -0.78
SYNGAP1-204ENST00000449372 DPH3P1Q9H4G8 78 aa10.21□□□□□ -0.78
SYNGAP1-204ENST00000449372 LINC00527Q9UJ94 153 aa10.21□□□□□ -0.78
SYNGAP1-204ENST00000449372 TOMM6Q96B49 74 aa10.21□□□□□ -0.78
SYNGAP1-204ENST00000449372 CFAP46Q8IYW2 2715 aa10.21□□□□□ -0.78
SYNGAP1-204ENST00000449372 ABCA4P78363 2273 aa10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 ECSCRQ19T08 205 aa10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 HRCT1Q6UXD1 115 aa10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 PHLDA3Q9Y5J5 127 aa10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 ARHGAP32A7KAX9 2087 aa10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 ZNF22P17026 224 aaPredicted RBP10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 DYNAPQ8N1N2 210 aa10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 TMEM263Q8WUH6 116 aaKnown RBP10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 IMUPQ9GZP8 106 aa10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 C15orf32Q32M92 178 aa10.2□□□□□ -0.78
SYNGAP1-204ENST00000449372 IGHV4-4A0A075B6R2 117 aa10.19□□□□□ -0.78
SYNGAP1-204ENST00000449372 M0R381 172 aa10.19□□□□□ -0.78
SYNGAP1-204ENST00000449372 MED14OSP0DP75 135 aa10.19□□□□□ -0.78
SYNGAP1-204ENST00000449372 GNLYP22749 145 aa10.19□□□□□ -0.78
SYNGAP1-204ENST00000449372 TMEM170BQ5T4T1 132 aa10.19□□□□□ -0.78
SYNGAP1-204ENST00000449372 KIR2DL5BQ8NHK3 375 aa10.19□□□□□ -0.78
SYNGAP1-204ENST00000449372 ZFP36P26651 326 aaKnown RBP10.19□□□□□ -0.78
SYNGAP1-204ENST00000449372 C9orf47Q6ZRZ4 202 aa10.19□□□□□ -0.78
SYNGAP1-204ENST00000449372 PIEZO1Q92508 2521 aa10.18□□□□□ -0.78
SYNGAP1-204ENST00000449372 BUB3O43684 328 aa10.18□□□□□ -0.78
SYNGAP1-204ENST00000449372 EIF4EBP3O60516 100 aaPredicted RBP10.18□□□□□ -0.78
SYNGAP1-204ENST00000449372 IGHV3-23P01764 117 aa10.18□□□□□ -0.78
SYNGAP1-204ENST00000449372 ERCC8Q13216 396 aa10.18□□□□□ -0.78
SYNGAP1-204ENST00000449372 SUMO2P61956 95 aaKnown RBP10.18□□□□□ -0.78
SYNGAP1-204ENST00000449372 PKD1L2Q7Z442 2459 aa10.18□□□□□ -0.78
SYNGAP1-204ENST00000449372 SPANXCQ9NY87 97 aa10.18□□□□□ -0.78
SYNGAP1-204ENST00000449372 IGHV1-69DA0A0B4J2H0 117 aa10.17□□□□□ -0.78
SYNGAP1-204ENST00000449372 H7C423 109 aa10.17□□□□□ -0.78
SYNGAP1-204ENST00000449372 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
SYNGAP1-204ENST00000449372 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.17□□□□□ -0.78
SYNGAP1-204ENST00000449372 SPANXDQ9BXN6 97 aa10.17□□□□□ -0.78
SYNGAP1-204ENST00000449372 AGPAT4-IT1Q9H0P7 198 aa10.17□□□□□ -0.78
SYNGAP1-204ENST00000449372 NBASA2RRP1 2371 aa10.17□□□□□ -0.78
SYNGAP1-204ENST00000449372 COL6A6A6NMZ7 2263 aa10.17□□□□□ -0.78
SYNGAP1-204ENST00000449372 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms