RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 MUC4Q99102 2169 aa11.92□□□□□ -0.5
AP000253.1-201ENST00000449339 FN1P02751 2386 aaKnown RBP11.91□□□□□ -0.5
AP000253.1-201ENST00000449339 KNCNA6PVL3 124 aa11.91□□□□□ -0.5
AP000253.1-201ENST00000449339 AMTNQ6UX39 209 aa11.91□□□□□ -0.5
AP000253.1-201ENST00000449339 DEFB131AP59861 70 aa11.91□□□□□ -0.5
AP000253.1-201ENST00000449339 DEFB114Q30KQ6 69 aa11.91□□□□□ -0.5
AP000253.1-201ENST00000449339 CD300EQ496F6 205 aaPredicted RBP11.91□□□□□ -0.5
AP000253.1-201ENST00000449339 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
AP000253.1-201ENST00000449339 SUMO2P61956 95 aaKnown RBP11.9□□□□□ -0.5
AP000253.1-201ENST00000449339 TP73-AS1Q9UF72 201 aa11.9□□□□□ -0.5
AP000253.1-201ENST00000449339 IGHV3-16A0A0C4DH30 117 aa11.9□□□□□ -0.51
AP000253.1-201ENST00000449339 Q8N1Y9 231 aa11.9□□□□□ -0.51
AP000253.1-201ENST00000449339 RPL39LQ96EH5 51 aaKnown RBP11.9□□□□□ -0.51
AP000253.1-201ENST00000449339 C20orf78Q9BR46 151 aa11.9□□□□□ -0.51
AP000253.1-201ENST00000449339 MDFICQ9P1T7 246 aa11.9□□□□□ -0.51
AP000253.1-201ENST00000449339 KIF25-AS1Q9Y6Z4 181 aa11.9□□□□□ -0.51
AP000253.1-201ENST00000449339 IGHV1OR15-1A0A075B7D0 117 aa11.89□□□□□ -0.51
AP000253.1-201ENST00000449339 TRAV2A0A0B4J234 112 aa11.89□□□□□ -0.51
AP000253.1-201ENST00000449339 NDUFA7O95182 113 aa11.89□□□□□ -0.51
AP000253.1-201ENST00000449339 SMIM17P0DL12 118 aa11.89□□□□□ -0.51
AP000253.1-201ENST00000449339 PROK1P58294 105 aa11.89□□□□□ -0.51
AP000253.1-201ENST00000449339 SLC25A34Q6PIV7 304 aa11.89□□□□□ -0.51
AP000253.1-201ENST00000449339 FLNBO75369 2602 aaKnown RBP11.89□□□□□ -0.51
AP000253.1-201ENST00000449339 LINC00315P59091 139 aa11.88□□□□□ -0.51
AP000253.1-201ENST00000449339 POM121L12Q8N7R1 296 aa11.88□□□□□ -0.51
AP000253.1-201ENST00000449339 C9orf85Q96MD7 179 aa11.88□□□□□ -0.51
AP000253.1-201ENST00000449339 JPT2Q9H910 190 aa11.88□□□□□ -0.51
AP000253.1-201ENST00000449339 HLA-DRB4P13762 266 aa11.88□□□□□ -0.51
AP000253.1-201ENST00000449339 NSUN5P1Q3KNT7 163 aa11.88□□□□□ -0.51
AP000253.1-201ENST00000449339 JMJD8Q96S16 334 aa11.88□□□□□ -0.51
AP000253.1-201ENST00000449339 HLA-DRB4X5D2U9 266 aa11.88□□□□□ -0.51
AP000253.1-201ENST00000449339 ADARB2-AS1A8MUL3 147 aa11.87□□□□□ -0.51
AP000253.1-201ENST00000449339 KRTAP10-3P60369 221 aa11.87□□□□□ -0.51
AP000253.1-201ENST00000449339 C2CD3Q4AC94 2353 aa11.87□□□□□ -0.51
AP000253.1-201ENST00000449339 PPP1R17O96001 155 aa11.87□□□□□ -0.51
AP000253.1-201ENST00000449339 PRSS1P07477 247 aa11.87□□□□□ -0.51
AP000253.1-201ENST00000449339 DKK2Q9UBU2 259 aa11.87□□□□□ -0.51
AP000253.1-201ENST00000449339 A0A087WWL8 130 aa11.86□□□□□ -0.51
AP000253.1-201ENST00000449339 H3BMM0 161 aa11.86□□□□□ -0.51
AP000253.1-201ENST00000449339 NUDT3O95989 172 aa11.86□□□□□ -0.51
AP000253.1-201ENST00000449339 ATP5LO75964 103 aa11.86□□□□□ -0.51
AP000253.1-201ENST00000449339 ODF1Q14990 250 aa11.86□□□□□ -0.51
AP000253.1-201ENST00000449339 COL5A1-AS1Q5SY13 56 aa11.86□□□□□ -0.51
AP000253.1-201ENST00000449339 STPG4Q8N801 248 aa11.86□□□□□ -0.51
AP000253.1-201ENST00000449339 SVIPQ8NHG7 77 aa11.86□□□□□ -0.51
AP000253.1-201ENST00000449339 MAP6D1Q9H9H5 199 aa11.86□□□□□ -0.51
AP000253.1-201ENST00000449339 HINT1P49773 126 aaPredicted RBP11.85□□□□□ -0.51
AP000253.1-201ENST00000449339 RBX1P62877 108 aa11.85□□□□□ -0.51
AP000253.1-201ENST00000449339 ORMDL2Q53FV1 153 aa11.85□□□□□ -0.51
AP000253.1-201ENST00000449339 RBMY1BA6NDE4 496 aaKnown RBP11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 RBMY1EA6NEQ0 496 aaKnown RBP11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 A8MTW9 85 aa11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 K7EMI3 77 aa11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 RBMY1DP0C7P1 496 aaKnown RBP11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 RBMY1A1P0DJD3 496 aaKnown RBP11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 RBMY1CP0DJD4 496 aa11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 COX8AP10176 69 aa11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 RBMY1FQ15415 496 aaKnown RBP11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 SYT8Q8NBV8 401 aa11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 ZNF256Q9Y2P7 627 aaPredicted RBP11.84□□□□□ -0.51
AP000253.1-201ENST00000449339 F5H697 171 aa11.83□□□□□ -0.52
AP000253.1-201ENST00000449339 FAM74A4Q5TZK3 123 aa11.83□□□□□ -0.52
AP000253.1-201ENST00000449339 SUMO4Q6EEV6 95 aa11.83□□□□□ -0.52
AP000253.1-201ENST00000449339 TRGV11A0A075B6L2 103 aa11.83□□□□□ -0.52
AP000253.1-201ENST00000449339 CBY3A6NI87 242 aa11.83□□□□□ -0.52
AP000253.1-201ENST00000449339 SPAG8Q99932 426 aaPredicted RBP11.83□□□□□ -0.52
AP000253.1-201ENST00000449339 CSTL1Q9H114 145 aa11.83□□□□□ -0.52
AP000253.1-201ENST00000449339 ZMAT4Q9H898 229 aa11.82□□□□□ -0.52
AP000253.1-201ENST00000449339 TCTAP57738 103 aa11.82□□□□□ -0.52
AP000253.1-201ENST00000449339 HTN1P15515 57 aa11.81□□□□□ -0.52
AP000253.1-201ENST00000449339 ODF3L2Q3SX64 289 aa11.81□□□□□ -0.52
AP000253.1-201ENST00000449339 ZNF876PQ49A33 203 aa11.81□□□□□ -0.52
AP000253.1-201ENST00000449339 TOMM6Q96B49 74 aa11.81□□□□□ -0.52
AP000253.1-201ENST00000449339 JMJD1CQ15652 2540 aa11.81□□□□□ -0.52
AP000253.1-201ENST00000449339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 K7EP13 123 aa11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 SAP30O75446 220 aa11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 CRYGDP07320 174 aa11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 MPV17L2Q567V2 206 aa11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 IGKCP01834 107 aa11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 FGF6P10767 208 aa11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 NEGR1Q7Z3B1 354 aa11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 ORAOV1Q8WV07 137 aa11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 HHLA3Q9XRX5 114 aa11.8□□□□□ -0.52
AP000253.1-201ENST00000449339 TRAV25A0A0B4J276 109 aa11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 RPL32P62910 135 aaKnown RBP11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 DPM2O94777 84 aa11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 PRM2P04554 102 aa11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 POLR2KP53803 58 aaKnown RBP11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 ZNF56Q15929 161 aa11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 C2orf66Q6UXQ4 117 aa11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 SCGB3A1Q96QR1 104 aa11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 MRPL35Q9NZE8 188 aaKnown RBP11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 F8P00451 2351 aa11.79□□□□□ -0.52
AP000253.1-201ENST00000449339 CRLF1O75462 422 aa11.78□□□□□ -0.52
AP000253.1-201ENST00000449339 C2orf91Q6ZV80 131 aa11.78□□□□□ -0.52
AP000253.1-201ENST00000449339 RNASE8Q8TDE3 154 aaKnown RBP11.78□□□□□ -0.52
AP000253.1-201ENST00000449339 A0A087WX48 190 aa11.78□□□□□ -0.52
AP000253.1-201ENST00000449339 NMUP48645 174 aa11.78□□□□□ -0.52
AP000253.1-201ENST00000449339 BOD1L2Q8IYS8 172 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms