RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ZNF664Q8N3J9 261 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 C14orf178Q8N769 122 aaPredicted RBP7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 POM121L12Q8N7R1 296 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 C20orf78Q9BR46 151 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 VAMP8Q9BV40 100 aa7.78□□□□□ -1.16
VIPAS39-203ENST00000448935 MTORP42345 2549 aa7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 RBMY1BA6NDE4 496 aaKnown RBP7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 RBMY1EA6NEQ0 496 aaKnown RBP7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 MGPP08493 103 aa7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 RBMY1DP0C7P1 496 aaKnown RBP7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 GYPEP15421 78 aa7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 ZNF415Q09FC8 603 aa7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 ZNF124Q15973 351 aa7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 PIK3CD-AS1Q5SR53 167 aa7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 NRACQ8N912 160 aa7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 ANK3Q12955 4377 aaKnown RBP7.77□□□□□ -1.17
VIPAS39-203ENST00000448935 HIVEP1P15822 2718 aa7.76□□□□□ -1.17
VIPAS39-203ENST00000448935 SYS1-DBNDD2H3BUS1 97 aa7.76□□□□□ -1.17
VIPAS39-203ENST00000448935 INSL3P51460 131 aa7.76□□□□□ -1.17
VIPAS39-203ENST00000448935 KRTAP10-3P60369 221 aa7.76□□□□□ -1.17
VIPAS39-203ENST00000448935 BEAN1Q3B7T3 259 aa7.76□□□□□ -1.17
VIPAS39-203ENST00000448935 TRPT1Q86TN4 253 aaKnown RBP7.76□□□□□ -1.17
VIPAS39-203ENST00000448935 Q8N976 141 aa7.76□□□□□ -1.17
VIPAS39-203ENST00000448935 MDFICQ9P1T7 246 aa7.76□□□□□ -1.17
VIPAS39-203ENST00000448935 TRAV26-2A0A0B4J265 109 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 FCER1GP30273 86 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 KRTAP21-3Q3LHN1 58 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 SPATA12Q7Z6I5 190 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 LINC00482Q8N8I6 264 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 PTH2Q96A98 100 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 LINC01587Q99440 93 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 ZNF747Q9BV97 191 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 KIF25-AS1Q9Y6Z4 181 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 MUC4Q99102 2169 aa7.75□□□□□ -1.17
VIPAS39-203ENST00000448935 NF1P21359 2839 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 KIR2DL5BA0A0G2JN68 375 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 KIR2DL5BA0A0G2JPC4 375 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 RBMY1A1P0DJD3 496 aaKnown RBP7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 RBMY1CP0DJD4 496 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 GATA1P15976 413 aaPredicted RBP7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 SUMO2P61956 95 aaKnown RBP7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 RBMY1FQ15415 496 aaKnown RBP7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 ZNF876PQ49A33 203 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 CFAP161Q6P656 301 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 KIR2DL5AQ8N109 375 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 SPXQ9BT56 116 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 SMIM2Q9BVW6 85 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 PRO1933Q9H354 126 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 IGLV2-18A0A075B6J9 118 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 M0R2P5 195 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 SPRY2O43597 315 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 GAS8-AS1O95177 125 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 G0S2P27469 103 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 DDTP30046 118 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 RPL32P62910 135 aaKnown RBP7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 LAGE3Q14657 143 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 ORMDL2Q53FV1 153 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 MORN3Q6PF18 240 aaPredicted RBP7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 RASL10AQ92737 203 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 TMEM208Q9BTX3 173 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 NDUFAF3Q9BU61 184 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 C1QTNF4Q9BXJ3 329 aa7.74□□□□□ -1.17
VIPAS39-203ENST00000448935 SORL1Q92673 2214 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 A0A096LNJ9 63 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 LINC01549A6NIU2 74 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 F5H697 171 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 HTN1P15515 57 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 LINC00315P59091 139 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 ST20Q9HBF5 79 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 PAM16Q9Y3D7 125 aa7.73□□□□□ -1.17
VIPAS39-203ENST00000448935 WNK1Q9H4A3 2382 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 TRAV9-2A0A087WT02 112 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 A0A087WWL8 130 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 PRSS29PA6NIE9 313 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 A8MWV9 139 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 LINC00587B1AMM8 73 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 H7C1H1 209 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 ATP5LO75964 103 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 ZNF705AQ6ZN79 300 aaPredicted RBP7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 LINC00173Q6ZV60 143 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 CITED1Q99966 193 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 XCL2Q9UBD3 114 aa7.72□□□□□ -1.17
VIPAS39-203ENST00000448935 HSBP1L1C9JCN9 74 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 CRYGDP07320 174 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 DEFA6Q01524 100 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 ZNF56Q15929 161 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 SPATA45Q537H7 98 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 FAM74A4Q5TZK3 123 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 LINC01545Q5VT33 79 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 SUMO4Q6EEV6 95 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 TMEM158Q8WZ71 300 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 MCRIP2Q9BUT9 160 aaKnown RBP7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 GOLT1BQ9Y3E0 138 aa7.71□□□□□ -1.17
VIPAS39-203ENST00000448935 TRBV6-5A0A0K0K1A5 114 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 RHODO00212 210 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 TCAPO15273 167 aa7.7□□□□□ -1.18
VIPAS39-203ENST00000448935 NUDT3O95989 172 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms