RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 AMELXQ99217 191 aa10.18□□□□□ -0.78
POLR1B-209ENST00000448770 OPRPNQ99935 248 aaPredicted RBP10.18□□□□□ -0.78
POLR1B-209ENST00000448770 MRPL16Q9NX20 251 aaKnown RBP10.18□□□□□ -0.78
POLR1B-209ENST00000448770 TRAV12-3A0A0B4J271 114 aa10.18□□□□□ -0.78
POLR1B-209ENST00000448770 A6NDX4 124 aa10.18□□□□□ -0.78
POLR1B-209ENST00000448770 CLEC2AQ6UVW9 174 aa10.18□□□□□ -0.78
POLR1B-209ENST00000448770 C10orf99Q6UWK7 81 aa10.18□□□□□ -0.78
POLR1B-209ENST00000448770 DCANP1Q8TF63 244 aa10.18□□□□□ -0.78
POLR1B-209ENST00000448770 APOMO95445 188 aa10.17□□□□□ -0.78
POLR1B-209ENST00000448770 SCGB2A2Q13296 93 aa10.17□□□□□ -0.78
POLR1B-209ENST00000448770 FHL3Q13643 280 aa10.17□□□□□ -0.78
POLR1B-209ENST00000448770 CFAP126Q5VTH2 177 aa10.17□□□□□ -0.78
POLR1B-209ENST00000448770 NFE4Q86UQ8 179 aa10.17□□□□□ -0.78
POLR1B-209ENST00000448770 SIGMAR1Q99720 223 aa10.17□□□□□ -0.78
POLR1B-209ENST00000448770 PTH2Q96A98 100 aa10.17□□□□□ -0.78
POLR1B-209ENST00000448770 TRAV12-2A0A075B6T6 113 aa10.16□□□□□ -0.78
POLR1B-209ENST00000448770 SDHAF1A6NFY7 115 aa10.16□□□□□ -0.78
POLR1B-209ENST00000448770 IGLV1-40P01703 118 aa10.16□□□□□ -0.78
POLR1B-209ENST00000448770 USMG5Q96IX5 58 aa10.16□□□□□ -0.78
POLR1B-209ENST00000448770 MDFICQ9P1T7 246 aa10.16□□□□□ -0.78
POLR1B-209ENST00000448770 EIF4EBP3O60516 100 aaPredicted RBP10.16□□□□□ -0.78
POLR1B-209ENST00000448770 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
POLR1B-209ENST00000448770 DAZ1Q9NQZ3 744 aaKnown RBP10.16□□□□□ -0.78
POLR1B-209ENST00000448770 AVPP01185 164 aa10.15□□□□□ -0.78
POLR1B-209ENST00000448770 IGKV3-20P01619 116 aa10.15□□□□□ -0.78
POLR1B-209ENST00000448770 UBE2D3P61077 147 aa10.15□□□□□ -0.78
POLR1B-209ENST00000448770 UBE2D2P62837 147 aa10.15□□□□□ -0.78
POLR1B-209ENST00000448770 CFHR3Q02985 330 aa10.15□□□□□ -0.78
POLR1B-209ENST00000448770 PMVKQ15126 192 aa10.15□□□□□ -0.78
POLR1B-209ENST00000448770 FAM74A4Q5TZK3 123 aa10.15□□□□□ -0.78
POLR1B-209ENST00000448770 RPL32P62910 135 aaKnown RBP10.15□□□□□ -0.78
POLR1B-209ENST00000448770 FAM159AQ6UWV7 190 aa10.15□□□□□ -0.78
POLR1B-209ENST00000448770 NDUFA11Q86Y39 141 aa10.15□□□□□ -0.78
POLR1B-209ENST00000448770 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 TRBV7-9A0A0J9YWB2 115 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 F5H697 171 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 IGHV3-30P01768 117 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 IGHV3-30-5P0DP03 117 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 ZNF256Q9Y2P7 627 aaPredicted RBP10.14□□□□□ -0.79
POLR1B-209ENST00000448770 BRI3O95415 125 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 TGFAP01135 160 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 ZNF688P0C7X2 276 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 CFC1BP0CG36 223 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 CFC1P0CG37 223 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 PSMB2P49721 201 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 ZNF876PQ49A33 203 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 ZNF580Q9UK33 172 aa10.14□□□□□ -0.79
POLR1B-209ENST00000448770 IGHV3-16A0A0C4DH30 117 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 H3BUA1 57 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 NDUFS8O00217 210 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 TMEM170BQ5T4T1 132 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 DLX4Q92988 240 aaPredicted RBP10.13□□□□□ -0.79
POLR1B-209ENST00000448770 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 SPG11Q96JI7 2443 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 TRBV27A0A0K0K1C4 114 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 LGALS9O00182 355 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 PPP1R17O96001 155 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 P0DMU3 169 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 FAM231AP0DMU4 169 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 FAM231CP0DMU5 169 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 FOXI1Q12951 378 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 ZNF418Q8TF45 676 aaPredicted RBP10.13□□□□□ -0.79
POLR1B-209ENST00000448770 C1QTNF4Q9BXJ3 329 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 CDIP1Q9H305 208 aa10.13□□□□□ -0.79
POLR1B-209ENST00000448770 IGHV4-30-2A0A087WSY4 118 aa10.12□□□□□ -0.79
POLR1B-209ENST00000448770 VCYO14598 125 aa10.12□□□□□ -0.79
POLR1B-209ENST00000448770 TCL1BO95988 128 aa10.12□□□□□ -0.79
POLR1B-209ENST00000448770 CARD19Q96LW7 228 aa10.12□□□□□ -0.79
POLR1B-209ENST00000448770 TIMM17AQ99595 171 aa10.12□□□□□ -0.79
POLR1B-209ENST00000448770 M0QY20 66 aa10.12□□□□□ -0.79
POLR1B-209ENST00000448770 GNLYP22749 145 aa10.12□□□□□ -0.79
POLR1B-209ENST00000448770 Q8N1Y9 231 aa10.12□□□□□ -0.79
POLR1B-209ENST00000448770 SLC25A29Q8N8R3 303 aa10.11□□□□□ -0.79
POLR1B-209ENST00000448770 C10orf105Q8TEF2 133 aa10.11□□□□□ -0.79
POLR1B-209ENST00000448770 KIR2DL4Q99706 377 aa10.11□□□□□ -0.79
POLR1B-209ENST00000448770 UTP20O75691 2785 aaKnown RBP10.11□□□□□ -0.79
POLR1B-209ENST00000448770 IGHV3-64A0A075B6Q5 118 aa10.11□□□□□ -0.79
POLR1B-209ENST00000448770 TRBV6-5A0A0K0K1A5 114 aa10.11□□□□□ -0.79
POLR1B-209ENST00000448770 TMEM238LA0A1B0GVL6 79 aa10.11□□□□□ -0.79
POLR1B-209ENST00000448770 A6NJY4 79 aa10.11□□□□□ -0.79
POLR1B-209ENST00000448770 TMEM141Q96I45 108 aa10.11□□□□□ -0.79
POLR1B-209ENST00000448770 CSPG4Q6UVK1 2322 aa10.11□□□□□ -0.79
POLR1B-209ENST00000448770 J3QR89 54 aa10.1□□□□□ -0.79
POLR1B-209ENST00000448770 SYT8Q8NBV8 401 aa10.1□□□□□ -0.79
POLR1B-209ENST00000448770 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.1□□□□□ -0.795e-7■■■■■ 55.7
POLR1B-209ENST00000448770 SORL1Q92673 2214 aa10.1□□□□□ -0.79
POLR1B-209ENST00000448770 J3QQQ9 107 aa10.1□□□□□ -0.79
POLR1B-209ENST00000448770 SCGB1A1P11684 91 aa10.1□□□□□ -0.79
POLR1B-209ENST00000448770 ZNF56Q15929 161 aa10.1□□□□□ -0.79
POLR1B-209ENST00000448770 SPINK13Q1W4C9 94 aa10.1□□□□□ -0.79
POLR1B-209ENST00000448770 CFAP46Q8IYW2 2715 aa10.09□□□□□ -0.79
POLR1B-209ENST00000448770 ZANQ9Y493 2812 aa10.09□□□□□ -0.79
POLR1B-209ENST00000448770 HERVK_113P61574 105 aa10.09□□□□□ -0.79
POLR1B-209ENST00000448770 PIMREGQ9BSJ6 248 aa10.09□□□□□ -0.79
POLR1B-209ENST00000448770 A0A0J9YX75 114 aa10.09□□□□□ -0.79
POLR1B-209ENST00000448770 FAM104AQ969W3 186 aa10.09□□□□□ -0.79
POLR1B-209ENST00000448770 K7EMT4 169 aa10.08□□□□□ -0.8
POLR1B-209ENST00000448770 RBMY1A1P0DJD3 496 aaKnown RBP10.08□□□□□ -0.8
POLR1B-209ENST00000448770 RBMY1CP0DJD4 496 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms