RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 Q6ZVQ6 151 aa7.06□□□□□ -1.28
NIPBL-202ENST00000448238 SLC22A18ASQ8N1D0 253 aa7.06□□□□□ -1.28
NIPBL-202ENST00000448238 E9PLD3 99 aa7.06□□□□□ -1.28
NIPBL-202ENST00000448238 ANKHD1Q8IWZ3 2542 aaKnown RBP7.06□□□□□ -1.28
NIPBL-202ENST00000448238 TRBV27A0A0K0K1C4 114 aa7.06□□□□□ -1.28
NIPBL-202ENST00000448238 UNQ6494/PRO21346Q6UXR6 183 aa7.06□□□□□ -1.28
NIPBL-202ENST00000448238 IL9P15248 144 aa7.06□□□□□ -1.28
NIPBL-202ENST00000448238 NDUFA4L2Q9NRX3 87 aa7.06□□□□□ -1.28
NIPBL-202ENST00000448238 PTPRBP23467 1997 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 IGHV7-4-1A0A0J9YVY3 117 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 BRD3OSQ6XYD6 125 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 GLI3P10071 1580 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 IGKV1-9A0A0C4DH69 117 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 UFSP1Q6NVU6 142 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 WFDC10AQ9H1F0 79 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 H3BRN7 92 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 MSMBP08118 114 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 LMO1P25800 156 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 C5orf24Q7Z6I8 188 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 MARF1Q9Y4F3 1742 aaKnown RBP7.05□□□□□ -1.28
NIPBL-202ENST00000448238 IGLV10-54A0A075B6I4 117 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 C5orf67F2Z3F1 127 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 ENHOQ6UWT2 76 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 ADAMTS9Q9P2N4 1935 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 CD59P13987 128 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 NUP210Q8TEM1 1887 aaPredicted RBP7.05□□□□□ -1.28
NIPBL-202ENST00000448238 C11orf86A6NJI1 115 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 IGKV1D-12P01611 117 aa7.05□□□□□ -1.28
NIPBL-202ENST00000448238 ZNF706Q9Y5V0 76 aaPredicted RBP7.05□□□□□ -1.28
NIPBL-202ENST00000448238 PRR31Q5SQ13 230 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 NRACQ8N912 160 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 NCR3O14931 201 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 C9orf66Q5T8R8 295 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 ATP6V0E1O15342 81 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 CLEC2BQ92478 149 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 IGLV3-32A0A0A0MS00 114 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 CYYR1Q96J86 154 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 LRRK2Q5S007 2527 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 LINC00473A8K010 186 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 LINC00114Q6XXX2 140 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 CD177Q8N6Q3 437 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 SIPA1L1O43166 1804 aa7.04□□□□□ -1.28
NIPBL-202ENST00000448238 FHL1Q13642 323 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 SHISA3A0PJX4 238 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 WISP3O95389 354 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-202ENST00000448238 ASPHD1Q5U4P2 390 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 GGNQ86UU5 652 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 MIR7-3HGQ8N6C7 128 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 HHLA3Q9XRX5 114 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 A0A0J9YY99 117 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 MED14OSP0DP75 135 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 NRXN3Q9Y4C0 1643 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 LYNX1G3V0Z9 82 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 LYNX1P0DP58 116 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 LOXL1Q08397 574 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-202ENST00000448238 IGKV1-16P04430 117 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 COX7CP15954 63 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 PAPPAQ13219 1627 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 ADAMTSL3P82987 1691 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 TFF2Q03403 129 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 COLQQ9Y215 455 aaPredicted RBP7.03□□□□□ -1.28
NIPBL-202ENST00000448238 CRYGDP07320 174 aa7.03□□□□□ -1.28
NIPBL-202ENST00000448238 MIAQ16674 131 aa7.02□□□□□ -1.28
NIPBL-202ENST00000448238 IGHV4-30-2A0A087WSY4 118 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 TMEM254Q8TBM7 123 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 CSRP2Q16527 193 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 IGKV1-27A0A075B6S5 117 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 WIPF3A6NGB9 483 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 C7orf33Q8WU49 177 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 IGKV1D-43A0A0B4J1Z2 117 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 Q8N9W7 124 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 ZFAND3Q9H8U3 227 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 NUP210LQ5VU65 1888 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.02□□□□□ -1.29
NIPBL-202ENST00000448238 IGHV1-69P01742 117 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 IGF1P05019 195 aa7.02□□□□□ -1.29
NIPBL-202ENST00000448238 RNASE8Q8TDE3 154 aaKnown RBP7.02□□□□□ -1.29
NIPBL-202ENST00000448238 POLQO75417 2590 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 A0A0G2JNJ9 132 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 OXLD1Q5BKU9 147 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 Q9UFV3 132 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 FXYD2P54710 66 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 HIGD2AQ9BW72 106 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 TANC1Q9C0D5 1861 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 NDUFA11Q86Y39 141 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 TRBV7-6A0A0J9YX20 115 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 C10orf91Q5T1B1 145 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 IGLV3-9A0A075B6K5 115 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 LRP5O75197 1615 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 IGKV1D-8A0A087WSZ0 117 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 CTSGP08311 255 aa7.01□□□□□ -1.29
NIPBL-202ENST00000448238 CCKP06307 115 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 WDR86Q86TI4 376 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 TOMM6Q96B49 74 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 ZNF837Q96EG3 531 aaPredicted RBP7□□□□□ -1.29
NIPBL-202ENST00000448238 CCL24O00175 119 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 MIFP14174 115 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 ADCYAP1P18509 176 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 COA6Q5JTJ3 125 aaKnown RBP7□□□□□ -1.29
NIPBL-202ENST00000448238 P0DMU3 169 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 223.4 ms