RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PSMB8P28062 276 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 ATP6V0E2Q8NHE4 81 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 COX7B2Q8TF08 81 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 C11orf1Q9H5F2 150 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 SONP18583 2426 aaKnown RBP6.01□□□□□ -1.45
NEDD9-204ENST00000448183 C19orf71A6NCJ1 209 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 C2orf70A6NJV1 201 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 J3KT08 172 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 K7EQD1 137 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 SPATA12Q7Z6I5 190 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 CSPG4Q6UVK1 2322 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 ETDCA0A1B0GVM5 59 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 JMJD7-PLA2G4BH0Y9G9 81 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 UBE2BP63146 152 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 Q8N9W7 124 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 C1orf43Q9BWL3 253 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 ANAPC1Q9H1A4 1944 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 SORL1Q92673 2214 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 TEX22C9J3V5 150 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 CCL24O00175 119 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 COX7A2LO14548 114 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 DEFB136Q30KP8 78 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 APRG1Q8IVJ8 170 aa6.01□□□□□ -1.45
NEDD9-204ENST00000448183 TNRC6AQ8NDV7 1962 aaKnown RBP6□□□□□ -1.45
NEDD9-204ENST00000448183 LGALS9O00182 355 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 IGLV2-14P01704 120 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 Q8N1Y9 231 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 DAND5Q8N907 189 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 CAMK2N2Q96S95 79 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 MRPL36Q9P0J6 103 aaKnown RBP6□□□□□ -1.45
NEDD9-204ENST00000448183 NOTCH4Q99466 2003 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 ARHGAP21Q5T5U3 1957 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 H3BQ85 93 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 IGLV2-23P01705 113 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 CGB3P0DN86 165 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 C16orf74Q96GX8 76 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 MYO18BQ8IUG5 2567 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 IGHV4-4A0A075B6R2 117 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 GYPEP15421 78 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 PIFOQ8TCI5 191 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 VSIG2Q96IQ7 327 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 LECT2O14960 151 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 NDUFS5O43920 106 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 IGLV1-47P01700 117 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 BLCAPP62952 87 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 C5orf47Q569G3 176 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 IGFL2Q6UWQ7 119 aa6□□□□□ -1.45
NEDD9-204ENST00000448183 CGB7P0DN87 165 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 GRNP28799 593 aaKnown RBP5.99□□□□□ -1.45
NEDD9-204ENST00000448183 NREPQ16612 68 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 ZNF503Q96F45 646 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 DKK4Q9UBT3 224 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 FRMPD3Q5JV73 1810 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 A0A1B0GXF2 115 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 SLURP1P55000 103 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 MRPL23Q16540 153 aaKnown RBP5.99□□□□□ -1.45
NEDD9-204ENST00000448183 Q71RC1 249 aaPredicted RBP5.99□□□□□ -1.45
NEDD9-204ENST00000448183 TRBV7-3A0A075B6L6 115 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 K7EMT4 169 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 NCOA6Q14686 2063 aaPredicted RBP5.99□□□□□ -1.45
NEDD9-204ENST00000448183 IGLV10-54A0A075B6I4 117 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 TRAV26-1A0A087WT03 109 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 MP68P56378 58 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 ODF3L1Q8IXM7 274 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 CLEC2BQ92478 149 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 PTH2Q96A98 100 aa5.99□□□□□ -1.45
NEDD9-204ENST00000448183 ZFHX2Q9C0A1 2572 aaPredicted RBP5.98□□□□□ -1.45
NEDD9-204ENST00000448183 C2CD3Q4AC94 2353 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 IGHV1-58A0A0C4DH39 117 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 IGHV4-61A0A0C4DH41 118 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 E7EUB6 86 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 NDUFC2O95298 119 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 PRB1P04280 392 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 C20orf203Q8NBC4 194 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 DSCAML1Q8TD84 2053 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 PLXNB1O43157 2135 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 PIP4P1Q86T03 277 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 Q9HAA7 133 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 ATP5G1P05496 136 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 NDUFA11Q86Y39 141 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 C5orf56Q8N8D9 126 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 IGHV4-28A0A0C4DH34 117 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 CRYGBP07316 175 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 IGHV4-38-2P0DP08 117 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 TMEM61Q8N0U2 210 aa5.98□□□□□ -1.45
NEDD9-204ENST00000448183 P0C879 139 aa5.97□□□□□ -1.45
NEDD9-204ENST00000448183 WT1P19544 449 aaPredicted RBP5.97□□□□□ -1.45
NEDD9-204ENST00000448183 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
NEDD9-204ENST00000448183 IGHV3-30-3P0DP02 117 aa5.97□□□□□ -1.45
NEDD9-204ENST00000448183 CXCL5P42830 114 aa5.97□□□□□ -1.45
NEDD9-204ENST00000448183 LOXL1Q08397 574 aaPredicted RBP5.97□□□□□ -1.45
NEDD9-204ENST00000448183 NCKAP5O14513 1909 aa5.97□□□□□ -1.45
NEDD9-204ENST00000448183 RPL18AQ02543 176 aaKnown RBP5.96□□□□□ -1.45
NEDD9-204ENST00000448183 GPHB5Q86YW7 130 aa5.96□□□□□ -1.45
NEDD9-204ENST00000448183 MIR7-3HGQ8N6C7 128 aa5.96□□□□□ -1.45
NEDD9-204ENST00000448183 WFDC9Q8NEX5 89 aa5.96□□□□□ -1.45
NEDD9-204ENST00000448183 PTPN13Q12923 2485 aa5.96□□□□□ -1.45
NEDD9-204ENST00000448183 PRR14LQ5THK1 2151 aa5.96□□□□□ -1.45
NEDD9-204ENST00000448183 NDUFB1O75438 58 aa5.96□□□□□ -1.46
NEDD9-204ENST00000448183 IGLV2-8P01709 118 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms