RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 C19orf54Q5BKX5 351 aa9.72□□□□□ -0.85
SHC1-210ENST00000448116 ZNF815PA8K554 130 aa9.72□□□□□ -0.85
SHC1-210ENST00000448116 SRSF9Q13242 221 aaKnown RBP eCLIP9.72□□□□□ -0.85
SHC1-210ENST00000448116 NEXN-AS1Q8NBZ9 246 aa9.72□□□□□ -0.85
SHC1-210ENST00000448116 KLHL30-AS1Q8NEE0 82 aa9.72□□□□□ -0.85
SHC1-210ENST00000448116 USMG5Q96IX5 58 aa9.72□□□□□ -0.85
SHC1-210ENST00000448116 USP9YO00507 2555 aaPredicted RBP9.71□□□□□ -0.85
SHC1-210ENST00000448116 TRAV12-1A0A0B4J245 112 aa9.71□□□□□ -0.85
SHC1-210ENST00000448116 SLC25A16P16260 332 aa9.71□□□□□ -0.85
SHC1-210ENST00000448116 SPINK8P0C7L1 97 aa9.71□□□□□ -0.86
SHC1-210ENST00000448116 E9PLD3 99 aa9.7□□□□□ -0.86
SHC1-210ENST00000448116 IGHG2P01859 326 aa9.7□□□□□ -0.86
SHC1-210ENST00000448116 DAZ1Q9NQZ3 744 aaKnown RBP9.7□□□□□ -0.86
SHC1-210ENST00000448116 ZNF688P0C7X2 276 aa9.7□□□□□ -0.86
SHC1-210ENST00000448116 SH2D6Q7Z4S9 175 aa9.7□□□□□ -0.86
SHC1-210ENST00000448116 CCL19Q99731 98 aa9.7□□□□□ -0.86
SHC1-210ENST00000448116 LGALS1P09382 135 aaKnown RBP9.7□□□□□ -0.86
SHC1-210ENST00000448116 RPL39P62891 51 aaKnown RBP9.7□□□□□ -0.86
SHC1-210ENST00000448116 FOXI2Q6ZQN5 318 aa9.7□□□□□ -0.86
SHC1-210ENST00000448116 ERG28Q9UKR5 140 aa9.7□□□□□ -0.86
SHC1-210ENST00000448116 TP53TG1Q9Y2A0 90 aa9.7□□□□□ -0.86
SHC1-210ENST00000448116 TRAV12-2A0A075B6T6 113 aa9.69□□□□□ -0.86
SHC1-210ENST00000448116 ZNF256Q9Y2P7 627 aaPredicted RBP9.69□□□□□ -0.86
SHC1-210ENST00000448116 MUC4Q99102 2169 aa9.69□□□□□ -0.86
SHC1-210ENST00000448116 TAL2Q16559 108 aa9.69□□□□□ -0.86
SHC1-210ENST00000448116 ETDBQ3ZM63 59 aa9.69□□□□□ -0.86
SHC1-210ENST00000448116 IGHV4-30-2A0A087WSY4 118 aa9.69□□□□□ -0.86
SHC1-210ENST00000448116 CCDC179H3BU77 68 aa9.69□□□□□ -0.86
SHC1-210ENST00000448116 TRBV7-3A0A075B6L6 115 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 TRBV20-1A0A075B6N2 111 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 PLEKHB2Q96CS7 222 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 HOXA3O43365 443 aaPredicted RBP9.68□□□□□ -0.86
SHC1-210ENST00000448116 APOMO95445 188 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 C10orf99Q6UWK7 81 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 PTH2Q96A98 100 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 A6NDX4 124 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 CRIP2P52943 208 aaPredicted RBP9.68□□□□□ -0.86
SHC1-210ENST00000448116 RRN3P1Q2M238 152 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
SHC1-210ENST00000448116 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
SHC1-210ENST00000448116 MT-ATP8P03928 68 aa9.67□□□□□ -0.86
SHC1-210ENST00000448116 INSL3P51460 131 aa9.67□□□□□ -0.86
SHC1-210ENST00000448116 SUMO4Q6EEV6 95 aa9.67□□□□□ -0.86
SHC1-210ENST00000448116 KIR2DL4Q99706 377 aa9.67□□□□□ -0.86
SHC1-210ENST00000448116 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
SHC1-210ENST00000448116 PPP1R17O96001 155 aa9.67□□□□□ -0.86
SHC1-210ENST00000448116 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
SHC1-210ENST00000448116 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 HTN1P15515 57 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 GAGE13Q4V321 117 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 C10orf105Q8TEF2 133 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 ZNF418Q8TF45 676 aaPredicted RBP9.66□□□□□ -0.86
SHC1-210ENST00000448116 ZNF56Q15929 161 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 ZFP2Q6ZN57 461 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 DUX5Q96PT3 197 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 CACNA1AO00555 2505 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 SDHAF1A6NFY7 115 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 AVPP01185 164 aa9.66□□□□□ -0.86
SHC1-210ENST00000448116 POLQO75417 2590 aa9.65□□□□□ -0.86
SHC1-210ENST00000448116 FAM19A4Q96LR4 140 aa9.65□□□□□ -0.86
SHC1-210ENST00000448116 ACACBO00763 2458 aa9.65□□□□□ -0.86
SHC1-210ENST00000448116 MSMBP08118 114 aa9.65□□□□□ -0.86
SHC1-210ENST00000448116 LINC00315P59091 139 aa9.65□□□□□ -0.86
SHC1-210ENST00000448116 MDFICQ9P1T7 246 aa9.65□□□□□ -0.86
SHC1-210ENST00000448116 VPS13CQ709C8 3753 aa9.65□□□□□ -0.87
SHC1-210ENST00000448116 VCYO14598 125 aa9.65□□□□□ -0.87
SHC1-210ENST00000448116 CRYGDP07320 174 aa9.65□□□□□ -0.87
SHC1-210ENST00000448116 MED14OSP0DP75 135 aa9.65□□□□□ -0.87
SHC1-210ENST00000448116 NRGNQ92686 78 aa9.65□□□□□ -0.87
SHC1-210ENST00000448116 A0A1B0GWB2 263 aa9.64□□□□□ -0.87
SHC1-210ENST00000448116 F8W1H4 67 aa9.64□□□□□ -0.87
SHC1-210ENST00000448116 H3BUA1 57 aa9.64□□□□□ -0.87
SHC1-210ENST00000448116 TSHBP01222 138 aa9.64□□□□□ -0.87
SHC1-210ENST00000448116 HERVK_113P61574 105 aa9.64□□□□□ -0.87
SHC1-210ENST00000448116 OPRPNQ99935 248 aaPredicted RBP9.64□□□□□ -0.87
SHC1-210ENST00000448116 KIF25-AS1Q9Y6Z4 181 aa9.64□□□□□ -0.87
SHC1-210ENST00000448116 FAM208BQ5VWN6 2430 aa9.64□□□□□ -0.87
SHC1-210ENST00000448116 PKD1L2Q7Z442 2459 aa9.64□□□□□ -0.87
SHC1-210ENST00000448116 SPINK13Q1W4C9 94 aa9.64□□□□□ -0.87
SHC1-210ENST00000448116 KLLNB2CW77 178 aa9.63□□□□□ -0.87
SHC1-210ENST00000448116 IGHV4-59P01825 116 aa9.63□□□□□ -0.87
SHC1-210ENST00000448116 PMVKQ15126 192 aa9.63□□□□□ -0.87
SHC1-210ENST00000448116 SPANXB1Q9NS25 103 aaPredicted RBP9.63□□□□□ -0.87
SHC1-210ENST00000448116 SMIM9A6NGZ8 99 aa9.63□□□□□ -0.87
SHC1-210ENST00000448116 IGHV3-64A0A075B6Q5 118 aa9.63□□□□□ -0.87
SHC1-210ENST00000448116 IGLV1-40P01703 118 aa9.63□□□□□ -0.87
SHC1-210ENST00000448116 PSMB2P49721 201 aa9.63□□□□□ -0.87
SHC1-210ENST00000448116 MAPK1IP1LQ8NDC0 245 aa9.63□□□□□ -0.87
SHC1-210ENST00000448116 SPAG8Q99932 426 aaPredicted RBP9.63□□□□□ -0.87
SHC1-210ENST00000448116 ITPR1Q14643 2758 aa9.63□□□□□ -0.87
SHC1-210ENST00000448116 J3QR89 54 aa9.62□□□□□ -0.87
SHC1-210ENST00000448116 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
SHC1-210ENST00000448116 MORN3Q6PF18 240 aaPredicted RBP9.62□□□□□ -0.87
SHC1-210ENST00000448116 DCANP1Q8TF63 244 aa9.62□□□□□ -0.87
SHC1-210ENST00000448116 RAX2Q96IS3 184 aa9.62□□□□□ -0.87
SHC1-210ENST00000448116 USP9XQ93008 2570 aaPredicted RBP9.62□□□□□ -0.87
SHC1-210ENST00000448116 F5H768 121 aa9.62□□□□□ -0.87
SHC1-210ENST00000448116 SYNJ2BPP57105 145 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms