RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 FAM231BA6NCW3 169 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 H3BP45 60 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 SLC17A3O00476 420 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 TSC22D2O75157 780 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 IFNA7P01567 189 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 CAMLGP49069 296 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 INPP1P49441 399 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 SLC38A11Q08AI6 406 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 LBHQ53QV2 105 aaPredicted RBP3.68□□□□□ -1.82
USP49-205ENST00000448078 SPINK6Q6UWN8 80 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 TMUB2Q71RG4 321 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 NIT1Q86X76 327 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 CYB561D1Q8N8Q1 229 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 FAM19A4Q96LR4 140 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 TMEM14CQ9P0S9 112 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 LENEPQ9Y5L5 61 aa3.68□□□□□ -1.82
USP49-205ENST00000448078 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 TRAV21A0A0B4J279 112 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 L7N2F9 121 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 M0R3E3 92 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 RGS5O15539 181 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 BCL2L11O43521 198 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 METTL15P1P0C7V9 234 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 TAS2R30P59541 319 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 FAM74A1Q5RGS3 127 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 ZFAND2AQ8N6M9 145 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 ASB13Q8WXK3 278 aa3.67□□□□□ -1.82
USP49-205ENST00000448078 IGHV3-73A0A0B4J1V6 119 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 TRAV26-2A0A0B4J265 109 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 RBAKDNA6NC62 111 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 A8MWV9 139 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 PHOX2AO14813 284 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 GNRH2O43555 120 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 SSSCA1O60232 199 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 NBEAP1P0C6P0 100 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 AP3S2P59780 193 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 VBP1P61758 197 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 CFAP126Q5VTH2 177 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 Q6AWC8 147 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 ZFP2Q6ZN57 461 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 SDIM1Q6ZPB5 146 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 Q6ZQT7 251 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 Q6ZVQ6 151 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 COX8CQ7Z4L0 72 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 EXOC3-AS1Q8N2X6 119 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 CMTM2Q8TAZ6 248 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 NMES1Q9C002 83 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 PRR34Q9NV39 138 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 RSL24D1Q9UHA3 163 aaKnown RBP3.66□□□□□ -1.82
USP49-205ENST00000448078 PKIGQ9Y2B9 76 aa3.66□□□□□ -1.82
USP49-205ENST00000448078 IGKV2-40A0A087WW87 121 aaPredicted RBP3.65□□□□□ -1.83
USP49-205ENST00000448078 IGKV2D-40P01614 121 aaPredicted RBP3.65□□□□□ -1.83
USP49-205ENST00000448078 HLA-DQA1P01909 254 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 PVALBP20472 110 aaPredicted RBP3.65□□□□□ -1.83
USP49-205ENST00000448078 RPL29P47914 159 aaKnown RBP3.65□□□□□ -1.83
USP49-205ENST00000448078 BCAP31P51572 246 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 KRTAP10-8P60410 259 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 IL18Q14116 193 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 MIAQ16674 131 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 ATRAIDQ6UW56 229 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 ZNF664Q8N3J9 261 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 OR2G3Q8NGZ4 309 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 MCFD2Q8NI22 146 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 Q8TAT8 98 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 SMIM4Q8WVI0 70 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 SLC25A21Q9BQT8 299 aaPredicted RBP3.65□□□□□ -1.83
USP49-205ENST00000448078 NDFIP1Q9BT67 221 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 LYRM2Q9NU23 88 aaPredicted RBP3.65□□□□□ -1.83
USP49-205ENST00000448078 UQCC1Q9NVA1 299 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 GSKIPQ9P0R6 139 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 VAX2Q9UIW0 290 aa3.65□□□□□ -1.83
USP49-205ENST00000448078 DNAH8Q96JB1 4490 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 A0A087WXM4 84 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 SFT2D2O95562 160 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 ANGP03950 147 aaKnown RBP3.64□□□□□ -1.83
USP49-205ENST00000448078 S100A4P26447 101 aaKnown RBP3.64□□□□□ -1.83
USP49-205ENST00000448078 S100A11P31949 105 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 RANP62826 216 aaKnown RBP3.64□□□□□ -1.83
USP49-205ENST00000448078 HBG1P69891 147 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 HBG2P69892 147 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 LGALSLQ3ZCW2 172 aaPredicted RBP3.64□□□□□ -1.83
USP49-205ENST00000448078 TMEM14EPQ6UXP3 125 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 OR2T35Q8NGX2 323 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 TYMSOSQ8TAI1 123 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 PTH2Q96A98 100 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 DIRAS2Q96HU8 199 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 MRPS26Q9BYN8 205 aaKnown RBP3.64□□□□□ -1.83
USP49-205ENST00000448078 LINC00474Q9P2X8 69 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 KIF25-AS1Q9Y6Z4 181 aa3.64□□□□□ -1.83
USP49-205ENST00000448078 ANKRD20A5PA0PJZ0 165 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 H7C1H1 209 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 K7EQM0 130 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 CTDSPLO15194 276 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 GZMBP10144 247 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 TGFBR1P36897 503 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 S100A10P60903 97 aa3.63□□□□□ -1.83
USP49-205ENST00000448078 BAXQ07812 192 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms