RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.4□□□□□ -1.71
PTPN3-205ENST00000447271 LINC00469Q8N7U9 141 aa4.4□□□□□ -1.71
PTPN3-205ENST00000447271 Q8N8P6 123 aa4.4□□□□□ -1.71
PTPN3-205ENST00000447271 IFI27L1Q96BM0 104 aa4.4□□□□□ -1.71
PTPN3-205ENST00000447271 C17orf77Q96MU5 243 aa4.4□□□□□ -1.71
PTPN3-205ENST00000447271 GOLT1BQ9Y3E0 138 aa4.4□□□□□ -1.71
PTPN3-205ENST00000447271 DNAH11Q96DT5 4516 aa4.4□□□□□ -1.71
PTPN3-205ENST00000447271 TRAV2A0A0B4J234 112 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 IGHV1-24A0A0C4DH33 117 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 C2orf70A6NJV1 201 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 D6R8Y8 96 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 G3V318 75 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.39□□□□□ -1.71
PTPN3-205ENST00000447271 M0R381 172 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 DLEU1O43261 78 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 IGHV3-23P01764 117 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 IGHG4P01861 327 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 CSN3P07498 182 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 SNRPCP09234 159 aaKnown RBP4.39□□□□□ -1.71
PTPN3-205ENST00000447271 IGLC6P0CF74 106 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 PLNP26678 52 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 PPIFP30405 207 aaKnown RBP4.39□□□□□ -1.71
PTPN3-205ENST00000447271 LAGE3Q14657 143 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 TCTEX1D4Q5JR98 221 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 LINC01545Q5VT33 79 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 LINC00322Q6ZN03 302 aaPredicted RBP4.39□□□□□ -1.71
PTPN3-205ENST00000447271 DYNAPQ8N1N2 210 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 PIFOQ8TCI5 191 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 ORAOV1Q8WV07 137 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 GLMPQ8WWB7 406 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 UBE2E2Q96LR5 201 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 KIR2DL4Q99706 377 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 RHPN1-AS1Q9BWJ2 59 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 AGPAT4-IT1Q9H0P7 198 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 DPH3P1Q9H4G8 78 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 TP53TG3Q9ULZ0 132 aa4.39□□□□□ -1.71
PTPN3-205ENST00000447271 TANC2Q9HCD6 1990 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 IGKV2-40A0A087WW87 121 aaPredicted RBP4.38□□□□□ -1.71
PTPN3-205ENST00000447271 TMSB15BA0A087X1C1 80 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 LOC389332A0A1B0GUA5 103 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 VCYO14598 125 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 TNFRSF6BO95407 300 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 IGKV2D-40P01614 121 aaPredicted RBP4.38□□□□□ -1.71
PTPN3-205ENST00000447271 IGLL1P15814 213 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 CRIP1P50238 77 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 DLX1P56177 255 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 NDPQ00604 133 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 MRPL51Q4U2R6 128 aaKnown RBP4.38□□□□□ -1.71
PTPN3-205ENST00000447271 GTF2H5Q6ZYL4 71 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 RNF152Q8N8N0 203 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 OR8A1Q8NGG7 326 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 OR2K2Q8NGT1 345 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 CCDC140Q96MF4 163 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 VGLL1Q99990 258 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 SIGLEC8Q9NYZ4 499 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 SMAD5-AS1Q9Y6J3 95 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 S4R3C0 116 aa4.38□□□□□ -1.71
PTPN3-205ENST00000447271 TNCP24821 2201 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 TRGV11A0A075B6L2 103 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 LINC01546A6NGU7 62 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 SNAI2O43623 268 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 NUDT3O95989 172 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 COX8AP10176 69 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 ZNF25P17030 456 aaPredicted RBP4.37□□□□□ -1.71
PTPN3-205ENST00000447271 GCSHP23434 173 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 IFI27P40305 119 aaPredicted RBP4.37□□□□□ -1.71
PTPN3-205ENST00000447271 HERVK_113P61574 105 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 RPL32P62910 135 aaKnown RBP4.37□□□□□ -1.71
PTPN3-205ENST00000447271 PRB3Q04118 309 aaPredicted RBP4.37□□□□□ -1.71
PTPN3-205ENST00000447271 BATFQ16520 125 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 C19orf54Q5BKX5 351 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 PIK3CD-AS1Q5SR53 167 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 GDF5OSQ5U4N7 250 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 BRD3OSQ6XYD6 125 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 TMEM219Q86XT9 240 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 SNHG12Q9BXW3 62 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 VPREB3Q9UKI3 123 aa4.37□□□□□ -1.71
PTPN3-205ENST00000447271 DSCAML1Q8TD84 2053 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 IGHV3-35A0A0C4DH35 117 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 A0A1B0GVY2 172 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 DPM2O94777 84 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 IGKCP01834 107 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 HLA-DRB4P13762 266 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 RNASE4P34096 147 aaKnown RBP4.36□□□□□ -1.71
PTPN3-205ENST00000447271 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 PROK1P58294 105 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 LY6EQ16553 131 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 TAL2Q16559 108 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 Q6YL49 198 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 TMEM141Q96I45 108 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 CBY1Q9Y3M2 126 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 TIMM8BQ9Y5J9 83 aaPredicted RBP4.36□□□□□ -1.71
PTPN3-205ENST00000447271 HLA-DRB4X5D2U9 266 aa4.36□□□□□ -1.71
PTPN3-205ENST00000447271 TRAV12-1A0A0B4J245 112 aa4.35□□□□□ -1.71
PTPN3-205ENST00000447271 TRAV25A0A0B4J276 109 aa4.35□□□□□ -1.71
PTPN3-205ENST00000447271 A0A1B0GV90 55 aa4.35□□□□□ -1.71
PTPN3-205ENST00000447271 C7orf71A4D174 169 aa4.35□□□□□ -1.71
PTPN3-205ENST00000447271 CIDEAO60543 219 aa4.35□□□□□ -1.71
PTPN3-205ENST00000447271 NDUFA7O95182 113 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms