RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 RIGQ13278 110 aa12.68□□□□□ -0.38
TRAPPC4-203ENST00000447216 PHLDA1Q8WV24 401 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-203ENST00000447216 WWC2-AS2Q96NR7 200 aa12.68□□□□□ -0.38
TRAPPC4-203ENST00000447216 AP1S3Q96PC3 154 aa12.68□□□□□ -0.38
TRAPPC4-203ENST00000447216 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
TRAPPC4-203ENST00000447216 TMEM242Q9NWH2 141 aa12.68□□□□□ -0.38
TRAPPC4-203ENST00000447216 DEFB131BA0A096LNP1 70 aa12.67□□□□□ -0.38
TRAPPC4-203ENST00000447216 TRAV10A0A0B4J240 114 aa12.67□□□□□ -0.38
TRAPPC4-203ENST00000447216 EVI2AP22794 236 aa12.67□□□□□ -0.38
TRAPPC4-203ENST00000447216 FHL2Q14192 279 aa12.67□□□□□ -0.38
TRAPPC4-203ENST00000447216 TRGV4A0A0C4DH28 118 aa12.66□□□□□ -0.38
TRAPPC4-203ENST00000447216 TRGC1P0CF51 173 aa12.66□□□□□ -0.38
TRAPPC4-203ENST00000447216 UFSP1Q6NVU6 142 aa12.66□□□□□ -0.38
TRAPPC4-203ENST00000447216 KCNIP4Q6PIL6 250 aa12.66□□□□□ -0.38
TRAPPC4-203ENST00000447216 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
TRAPPC4-203ENST00000447216 S100PP25815 95 aa12.65□□□□□ -0.38
TRAPPC4-203ENST00000447216 CAMPP49913 170 aa12.65□□□□□ -0.38
TRAPPC4-203ENST00000447216 ZFAND6Q6FIF0 208 aa12.65□□□□□ -0.38
TRAPPC4-203ENST00000447216 Q6ZSN1 163 aa12.65□□□□□ -0.38
TRAPPC4-203ENST00000447216 DYNC2H1Q8NCM8 4307 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-203ENST00000447216 A0A1B0GXF2 115 aa12.64□□□□□ -0.39
TRAPPC4-203ENST00000447216 MGPP08493 103 aa12.64□□□□□ -0.39
TRAPPC4-203ENST00000447216 SMIM17P0DL12 118 aa12.64□□□□□ -0.39
TRAPPC4-203ENST00000447216 BTF3L4Q96K17 158 aa12.64□□□□□ -0.39
TRAPPC4-203ENST00000447216 A0A0J9YY99 117 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 RHODO00212 210 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 GATA1P15976 413 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 LINC00315P59091 139 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 HBBP68871 147 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 ZNF56Q15929 161 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 TMEM88Q6PEY1 159 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 ZFP2Q6ZN57 461 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 CBLN2Q8IUK8 224 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 MUC7Q8TAX7 377 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 DPH3P1Q9H4G8 78 aa12.63□□□□□ -0.39
TRAPPC4-203ENST00000447216 SCO1O75880 301 aa12.62□□□□□ -0.39
TRAPPC4-203ENST00000447216 SMIM15Q7Z3B0 74 aa12.62□□□□□ -0.39
TRAPPC4-203ENST00000447216 ATP5L2Q7Z4Y8 100 aa12.62□□□□□ -0.39
TRAPPC4-203ENST00000447216 TRAV26-1A0A087WT03 109 aa12.61□□□□□ -0.39
TRAPPC4-203ENST00000447216 A0A1B0GW15 77 aa12.61□□□□□ -0.39
TRAPPC4-203ENST00000447216 F5H697 171 aa12.61□□□□□ -0.39
TRAPPC4-203ENST00000447216 S100A1P23297 94 aa12.61□□□□□ -0.39
TRAPPC4-203ENST00000447216 CEMP1Q6PRD7 247 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-203ENST00000447216 TMEM191AQ9H0A3 160 aa12.61□□□□□ -0.39
TRAPPC4-203ENST00000447216 HHLA3Q9XRX5 114 aa12.61□□□□□ -0.39
TRAPPC4-203ENST00000447216 STARD9Q9P2P6 4700 aa12.61□□□□□ -0.39
TRAPPC4-203ENST00000447216 CSMD3Q7Z407 3707 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 TRAV9-1A0A075B6T8 112 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 TGIF2-C20orf24A0A0A6YYL0 155 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 CIDEAO60543 219 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 CRYBA4P53673 196 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 ELOBQ15370 118 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 AMN1Q8IY45 258 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 SLC25A29Q8N8R3 303 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 VSIG2Q96IQ7 327 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 SMCO4Q9NRQ5 59 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 PRO0255Q9UI72 69 aa12.6□□□□□ -0.39
TRAPPC4-203ENST00000447216 LOC100131303A0A0U1RQF7 123 aa12.59□□□□□ -0.39
TRAPPC4-203ENST00000447216 IGLL5B9A064 214 aa12.59□□□□□ -0.39
TRAPPC4-203ENST00000447216 PAX4O43316 350 aa12.59□□□□□ -0.39
TRAPPC4-203ENST00000447216 P0DMU3 169 aa12.59□□□□□ -0.39
TRAPPC4-203ENST00000447216 FAM231AP0DMU4 169 aa12.59□□□□□ -0.39
TRAPPC4-203ENST00000447216 FAM231CP0DMU5 169 aa12.59□□□□□ -0.39
TRAPPC4-203ENST00000447216 SUMO4Q6EEV6 95 aa12.59□□□□□ -0.39
TRAPPC4-203ENST00000447216 RNF185Q96GF1 192 aa12.59□□□□□ -0.39
TRAPPC4-203ENST00000447216 Q9UF83 564 aa12.59□□□□□ -0.39
TRAPPC4-203ENST00000447216 NUPR2A6NF83 97 aa12.58□□□□□ -0.4
TRAPPC4-203ENST00000447216 K7EQD1 137 aa12.58□□□□□ -0.4
TRAPPC4-203ENST00000447216 S100A8P05109 93 aa12.58□□□□□ -0.4
TRAPPC4-203ENST00000447216 RAB4BP61018 213 aa12.58□□□□□ -0.4
TRAPPC4-203ENST00000447216 YPEL4Q96NS1 127 aa12.58□□□□□ -0.4
TRAPPC4-203ENST00000447216 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
TRAPPC4-203ENST00000447216 SLAQ13239 276 aa12.57□□□□□ -0.4
TRAPPC4-203ENST00000447216 FAM104BQ5XKR9 115 aa12.57□□□□□ -0.4
TRAPPC4-203ENST00000447216 GATD1Q8NB37 220 aa12.57□□□□□ -0.4
TRAPPC4-203ENST00000447216 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
TRAPPC4-203ENST00000447216 GYPEP15421 78 aa12.56□□□□□ -0.4
TRAPPC4-203ENST00000447216 RAB4AP20338 218 aa12.56□□□□□ -0.4
TRAPPC4-203ENST00000447216 RHOHQ15669 191 aa12.56□□□□□ -0.4
TRAPPC4-203ENST00000447216 SMKR1H3BMG3 65 aa12.55□□□□□ -0.4
TRAPPC4-203ENST00000447216 TMEM136Q6ZRR5 245 aa12.55□□□□□ -0.4
TRAPPC4-203ENST00000447216 KLK5Q9Y337 293 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC4-203ENST00000447216 PLECQ15149 4684 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-203ENST00000447216 TRBV24-1A0A075B6N3 115 aa12.54□□□□□ -0.4
TRAPPC4-203ENST00000447216 M0QY20 66 aa12.54□□□□□ -0.4
TRAPPC4-203ENST00000447216 GAS8-AS1O95177 125 aa12.54□□□□□ -0.4
TRAPPC4-203ENST00000447216 NCR2O95944 276 aa12.54□□□□□ -0.4
TRAPPC4-203ENST00000447216 NUDT3O95989 172 aa12.54□□□□□ -0.4
TRAPPC4-203ENST00000447216 MRPL51Q4U2R6 128 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-203ENST00000447216 RASL11AQ6T310 242 aa12.54□□□□□ -0.4
TRAPPC4-203ENST00000447216 PRADC1Q9BSG0 188 aa12.54□□□□□ -0.4
TRAPPC4-203ENST00000447216 TENM2Q9NT68 2774 aa12.53□□□□□ -0.4
TRAPPC4-203ENST00000447216 GAGE12JA6NER3 117 aa12.53□□□□□ -0.4
TRAPPC4-203ENST00000447216 GAGE1Q13065 139 aa12.53□□□□□ -0.4
TRAPPC4-203ENST00000447216 GAGE4Q13068 117 aa12.53□□□□□ -0.4
TRAPPC4-203ENST00000447216 GAGE5Q13069 117 aa12.53□□□□□ -0.4
TRAPPC4-203ENST00000447216 GAGE13Q4V321 117 aa12.53□□□□□ -0.4
TRAPPC4-203ENST00000447216 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
TRAPPC4-203ENST00000447216 FAM210BQ96KR6 192 aa12.53□□□□□ -0.4
TRAPPC4-203ENST00000447216 A0A096LPF7 62 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms