RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ODF3BA8MYP8 253 aa10.52□□□□□ -0.73
VPS52-212ENST00000445902 MUSTN1Q8IVN3 82 aa10.52□□□□□ -0.73
VPS52-212ENST00000445902 C15orf53Q8NAA6 179 aa10.52□□□□□ -0.73
VPS52-212ENST00000445902 ZNF580Q9UK33 172 aa10.52□□□□□ -0.73
VPS52-212ENST00000445902 CD3EP07766 207 aa10.52□□□□□ -0.73
VPS52-212ENST00000445902 Q8N9W7 124 aa10.52□□□□□ -0.73
VPS52-212ENST00000445902 LINC00527Q9UJ94 153 aa10.52□□□□□ -0.73
VPS52-212ENST00000445902 PTPRZ1P23471 2315 aaPredicted RBP10.51□□□□□ -0.73
VPS52-212ENST00000445902 IGFL3Q6UXB1 125 aa10.51□□□□□ -0.73
VPS52-212ENST00000445902 TMEM263Q8WUH6 116 aaKnown RBP10.51□□□□□ -0.73
VPS52-212ENST00000445902 ZNF256Q9Y2P7 627 aaPredicted RBP10.51□□□□□ -0.73
VPS52-212ENST00000445902 TRAV8-4A0A0B4J246 113 aa10.51□□□□□ -0.73
VPS52-212ENST00000445902 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
VPS52-212ENST00000445902 ADARB2-AS1A8MUL3 147 aa10.51□□□□□ -0.73
VPS52-212ENST00000445902 RPL11P62913 178 aaKnown RBP10.51□□□□□ -0.73
VPS52-212ENST00000445902 ODF3Q96PU9 254 aa10.51□□□□□ -0.73
VPS52-212ENST00000445902 PRRC2AP48634 2157 aaKnown RBP10.51□□□□□ -0.73
VPS52-212ENST00000445902 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
VPS52-212ENST00000445902 LINC01620Q4KN68 170 aa10.5□□□□□ -0.73
VPS52-212ENST00000445902 Q8N6K4 173 aa10.5□□□□□ -0.73
VPS52-212ENST00000445902 SPTA1P02549 2419 aa10.5□□□□□ -0.73
VPS52-212ENST00000445902 COL6A6A6NMZ7 2263 aa10.5□□□□□ -0.73
VPS52-212ENST00000445902 TLN1Q9Y490 2541 aaKnown RBP10.5□□□□□ -0.73
VPS52-212ENST00000445902 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
VPS52-212ENST00000445902 PAPPA-AS1Q5QFB9 102 aa10.5□□□□□ -0.73
VPS52-212ENST00000445902 FAM74A4Q5TZK3 123 aa10.5□□□□□ -0.73
VPS52-212ENST00000445902 FAM110DQ8TAY7 271 aaPredicted RBP10.5□□□□□ -0.73
VPS52-212ENST00000445902 CENPVL3A0A0U1RRI6 287 aa10.49□□□□□ -0.73
VPS52-212ENST00000445902 CFAP161Q6P656 301 aa10.49□□□□□ -0.73
VPS52-212ENST00000445902 OR10J6PQ8NGY7 276 aa10.49□□□□□ -0.73
VPS52-212ENST00000445902 RIF1Q5UIP0 2472 aaKnown RBP10.49□□□□□ -0.73
VPS52-212ENST00000445902 SUMO4Q6EEV6 95 aa10.49□□□□□ -0.73
VPS52-212ENST00000445902 SDHAF1A6NFY7 115 aa10.48□□□□□ -0.73
VPS52-212ENST00000445902 GRNP28799 593 aaKnown RBP10.48□□□□□ -0.73
VPS52-212ENST00000445902 NPC2P61916 151 aa10.48□□□□□ -0.73
VPS52-212ENST00000445902 ATXN8Q156A1 80 aa10.48□□□□□ -0.73
VPS52-212ENST00000445902 PRR30Q53SZ7 412 aaPredicted RBP10.48□□□□□ -0.73
VPS52-212ENST00000445902 MRPL53Q96EL3 112 aaKnown RBP10.48□□□□□ -0.73
VPS52-212ENST00000445902 ZNF876PQ49A33 203 aa10.47□□□□□ -0.73
VPS52-212ENST00000445902 Q6ZSV7 163 aa10.47□□□□□ -0.73
VPS52-212ENST00000445902 TRIAP1O43715 76 aa10.47□□□□□ -0.73
VPS52-212ENST00000445902 EEF1AKMT3Q96AZ1 226 aa10.47□□□□□ -0.73
VPS52-212ENST00000445902 IGHV1-69DA0A0B4J2H0 117 aa10.47□□□□□ -0.73
VPS52-212ENST00000445902 H3BMM0 161 aa10.47□□□□□ -0.73
VPS52-212ENST00000445902 ITLN2Q8WWU7 325 aaPredicted RBP10.47□□□□□ -0.73
VPS52-212ENST00000445902 UBE2WQ96B02 151 aa10.47□□□□□ -0.73
VPS52-212ENST00000445902 SORL1Q92673 2214 aa10.46□□□□□ -0.73
VPS52-212ENST00000445902 PRSS2P07478 247 aa10.46□□□□□ -0.73
VPS52-212ENST00000445902 LINC00315P59091 139 aa10.46□□□□□ -0.73
VPS52-212ENST00000445902 UNQ9165/PRO28630Q6UXU0 137 aa10.46□□□□□ -0.73
VPS52-212ENST00000445902 SPTAN1Q13813 2472 aaKnown RBP10.46□□□□□ -0.74
VPS52-212ENST00000445902 TTC28Q96AY4 2481 aa10.46□□□□□ -0.74
VPS52-212ENST00000445902 POLR2KP53803 58 aaKnown RBP10.46□□□□□ -0.74
VPS52-212ENST00000445902 TRBV12-3P01733 135 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 MEIG1Q5JSS6 88 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 C2orf82Q6UX34 121 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 C9orf139Q6ZV77 190 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 CHCHD5Q9BSY4 110 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 TMEM141Q96I45 108 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 DUX3Q96PT4 197 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 FAM110AQ9BQ89 295 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 KIF25-AS1Q9Y6Z4 181 aa10.45□□□□□ -0.74
VPS52-212ENST00000445902 M0R1W7 72 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 VCYO14598 125 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 PPP1R17O96001 155 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 P0DMU3 169 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 FAM231AP0DMU4 169 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 FAM231CP0DMU5 169 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 ZNF56Q15929 161 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 A0A0B4J2C4 111 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 A0A0J9YXV3 536 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 CLEC2BQ92478 149 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 TMEM223A0PJW6 202 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 ZFP36P26651 326 aaKnown RBP10.44□□□□□ -0.74
VPS52-212ENST00000445902 FOXC1Q12948 553 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 TMEM219Q86XT9 240 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 U3KQE9 123 aa10.44□□□□□ -0.74
VPS52-212ENST00000445902 TRBV10-2A0A0K0K1G8 114 aa10.43□□□□□ -0.74
VPS52-212ENST00000445902 LEPROTO15243 131 aa10.43□□□□□ -0.74
VPS52-212ENST00000445902 PIP4P1Q86T03 277 aa10.43□□□□□ -0.74
VPS52-212ENST00000445902 EBI3Q14213 229 aa10.43□□□□□ -0.74
VPS52-212ENST00000445902 SPXQ9BT56 116 aa10.43□□□□□ -0.74
VPS52-212ENST00000445902 LENEPQ9Y5L5 61 aa10.43□□□□□ -0.74
VPS52-212ENST00000445902 LGALS9O00182 355 aa10.42□□□□□ -0.74
VPS52-212ENST00000445902 ZNF22P17026 224 aaPredicted RBP10.42□□□□□ -0.74
VPS52-212ENST00000445902 H7C423 109 aa10.42□□□□□ -0.74
VPS52-212ENST00000445902 UBE2E1P51965 193 aa10.42□□□□□ -0.74
VPS52-212ENST00000445902 TRBV7-1A0A0A6YYK4 115 aa10.41□□□□□ -0.74
VPS52-212ENST00000445902 A0A0J9YXY3 114 aa10.41□□□□□ -0.74
VPS52-212ENST00000445902 M0QXV9 152 aa10.41□□□□□ -0.74
VPS52-212ENST00000445902 IGHV4OR15-8A0A075B7B6 117 aa10.41□□□□□ -0.74
VPS52-212ENST00000445902 A0A087WW49 117 aa10.41□□□□□ -0.74
VPS52-212ENST00000445902 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
VPS52-212ENST00000445902 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.41□□□□□ -0.74
VPS52-212ENST00000445902 TRAV12-3A0A0B4J271 114 aa10.41□□□□□ -0.74
VPS52-212ENST00000445902 OVOL1O14753 267 aa10.41□□□□□ -0.74
VPS52-212ENST00000445902 IGHV3-11P01762 117 aa10.41□□□□□ -0.74
VPS52-212ENST00000445902 RPL13AP40429 203 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms