RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 CRYGDP07320 174 aa9.39□□□□□ -0.91
TRO-215ENST00000445561 SYNJ2BPP57105 145 aa9.39□□□□□ -0.91
TRO-215ENST00000445561 PRADC1Q9BSG0 188 aa9.39□□□□□ -0.91
TRO-215ENST00000445561 CYSLTR1Q9Y271 337 aa9.39□□□□□ -0.91
TRO-215ENST00000445561 PPP1R17O96001 155 aa9.38□□□□□ -0.91
TRO-215ENST00000445561 C12orf74Q32Q52 190 aa9.38□□□□□ -0.91
TRO-215ENST00000445561 LRRK2Q5S007 2527 aa9.38□□□□□ -0.91
TRO-215ENST00000445561 LGALS1P09382 135 aaKnown RBP9.38□□□□□ -0.91
TRO-215ENST00000445561 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
TRO-215ENST00000445561 ZFP2Q6ZN57 461 aa9.38□□□□□ -0.91
TRO-215ENST00000445561 TRBV7-3A0A075B6L6 115 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 IGHV4OR15-8A0A075B7B6 117 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 A0A087WW49 117 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 A0A0J9YX75 114 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 IGLL5B9A064 214 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 POLR2KP53803 58 aaKnown RBP9.37□□□□□ -0.91
TRO-215ENST00000445561 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
TRO-215ENST00000445561 IGHV3-16A0A0C4DH30 117 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 SDHAF1A6NFY7 115 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 E9PLD3 99 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 TGFAP01135 160 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 Q8N1Y9 231 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 KLHL30-AS1Q8NEE0 82 aa9.37□□□□□ -0.91
TRO-215ENST00000445561 RIPPLY3P57055 190 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 SNRPD3P62318 126 aaKnown RBP9.36□□□□□ -0.91
TRO-215ENST00000445561 SCGB2A2Q13296 93 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 TAL2Q16559 108 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 KIR2DL4Q99706 377 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 ZNF256Q9Y2P7 627 aaPredicted RBP9.36□□□□□ -0.91
TRO-215ENST00000445561 IGLV4-69A0A075B6H9 119 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 C11orf86A6NJI1 115 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 GATA3P23771 443 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 ZNF56Q15929 161 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 LINC01356Q8N9X3 169 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 PLEKHB2Q96CS7 222 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 ZNF479Q96JC4 524 aa9.36□□□□□ -0.91
TRO-215ENST00000445561 ZNF580Q9UK33 172 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 PTPN13Q12923 2485 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 ZNF462Q96JM2 2506 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 G3V4G9 280 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 K7EQG2 157 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 VCYO14598 125 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 SAMD13Q5VXD3 122 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 AMTNQ6UX39 209 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 SCGB1D4Q6XE38 83 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 C9orf85Q96MD7 179 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 ABCA12Q86UK0 2595 aa9.35□□□□□ -0.91
TRO-215ENST00000445561 ZNF469Q96JG9 3925 aaPredicted RBP9.35□□□□□ -0.91
TRO-215ENST00000445561 MORN3Q6PF18 240 aaPredicted RBP9.34□□□□□ -0.91
TRO-215ENST00000445561 LGALS9O00182 355 aa9.34□□□□□ -0.91
TRO-215ENST00000445561 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
TRO-215ENST00000445561 TEX15Q9BXT5 2789 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 A0A096LNT2 108 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 H3BMG7 143 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 COX6B1P14854 86 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 HTN1P15515 57 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 HOXD3P31249 432 aaPredicted RBP9.33□□□□□ -0.92
TRO-215ENST00000445561 FOXI2Q6ZQN5 318 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 MTURNQ8N3F0 131 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 OPRPNQ99935 248 aaPredicted RBP9.33□□□□□ -0.92
TRO-215ENST00000445561 IGHV1OR15-1A0A075B7D0 117 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 DSCR9P59020 149 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 RPL32P62910 135 aaKnown RBP9.33□□□□□ -0.92
TRO-215ENST00000445561 PMVKQ15126 192 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 MYO9AB2RTY4 2548 aa9.33□□□□□ -0.92
TRO-215ENST00000445561 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 M0QY20 66 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 PRB1P04280 392 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 DEFB136Q30KP8 78 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 BEX4Q9NWD9 120 aaPredicted RBP9.32□□□□□ -0.92
TRO-215ENST00000445561 TEX48A0A1B0GUV7 120 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 ZNF876PQ49A33 203 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 TMEM170BQ5T4T1 132 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 C18orf65Q6ZTR6 163 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 SYT8Q8NBV8 401 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 ZNRF2Q8NHG8 242 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 ODF3Q96PU9 254 aa9.32□□□□□ -0.92
TRO-215ENST00000445561 TSPEAR-AS2P59090 65 aa9.31□□□□□ -0.92
TRO-215ENST00000445561 SRSF9Q13242 221 aaKnown RBP eCLIP9.31□□□□□ -0.92
TRO-215ENST00000445561 WFDC2Q14508 124 aa9.31□□□□□ -0.92
TRO-215ENST00000445561 RRN3P1Q2M238 152 aa9.31□□□□□ -0.92
TRO-215ENST00000445561 VPREB3Q9UKI3 123 aa9.31□□□□□ -0.92
TRO-215ENST00000445561 LINC01619G3V211 115 aa9.31□□□□□ -0.92
TRO-215ENST00000445561 PRM2P04554 102 aa9.31□□□□□ -0.92
TRO-215ENST00000445561 HIST2H2BDQ6DRA6 164 aa9.31□□□□□ -0.92
TRO-215ENST00000445561 ZNF702PQ9H963 129 aa9.31□□□□□ -0.92
TRO-215ENST00000445561 NAV2Q8IVL1 2488 aa9.31□□□□□ -0.92
TRO-215ENST00000445561 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
TRO-215ENST00000445561 A0A1B0GWB2 263 aa9.3□□□□□ -0.92
TRO-215ENST00000445561 KNCNA6PVL3 124 aa9.3□□□□□ -0.92
TRO-215ENST00000445561 HOXA3O43365 443 aaPredicted RBP9.3□□□□□ -0.92
TRO-215ENST00000445561 RBMY1A1P0DJD3 496 aaKnown RBP9.3□□□□□ -0.92
TRO-215ENST00000445561 RBMY1CP0DJD4 496 aa9.3□□□□□ -0.92
TRO-215ENST00000445561 RBMY1FQ15415 496 aaKnown RBP9.3□□□□□ -0.92
TRO-215ENST00000445561 TMEM141Q96I45 108 aa9.3□□□□□ -0.92
TRO-215ENST00000445561 TIMM17AQ99595 171 aa9.3□□□□□ -0.92
TRO-215ENST00000445561 IGHV3-73A0A0B4J1V6 119 aa9.3□□□□□ -0.92
TRO-215ENST00000445561 TMEM89A2RUT3 159 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms