RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SAMD10Q9BYL1 202 aa7.34□□□□□ -1.23
SF3A1-203ENST00000444440 PARLQ9H300 379 aa7.34□□□□□ -1.23
SF3A1-203ENST00000444440 LY96Q9Y6Y9 160 aa7.34□□□□□ -1.23
SF3A1-203ENST00000444440 CXCL1P09341 107 aa7.33□□□□□ -1.24
SF3A1-203ENST00000444440 NKX2-5P52952 324 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-203ENST00000444440 RHOHQ15669 191 aa7.33□□□□□ -1.24
SF3A1-203ENST00000444440 DMRTA1Q5VZB9 504 aa7.33□□□□□ -1.24
SF3A1-203ENST00000444440 PRR27Q6MZM9 219 aa7.33□□□□□ -1.24
SF3A1-203ENST00000444440 ZFP82Q8N141 532 aa7.33□□□□□ -1.24
SF3A1-203ENST00000444440 Q8N3U1 123 aa7.33□□□□□ -1.24
SF3A1-203ENST00000444440 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
SF3A1-203ENST00000444440 BOLA1Q9Y3E2 137 aa7.33□□□□□ -1.24
SF3A1-203ENST00000444440 TRAV9-2A0A087WT02 112 aa7.32□□□□□ -1.24
SF3A1-203ENST00000444440 RAB19A4D1S5 217 aa7.32□□□□□ -1.24
SF3A1-203ENST00000444440 RHODO00212 210 aa7.32□□□□□ -1.24
SF3A1-203ENST00000444440 LINC00694P0DN24 101 aa7.32□□□□□ -1.24
SF3A1-203ENST00000444440 RPS20P60866 119 aaKnown RBP7.32□□□□□ -1.24
SF3A1-203ENST00000444440 CENPWQ5EE01 88 aa7.32□□□□□ -1.24
SF3A1-203ENST00000444440 SCRT2Q9NQ03 307 aa7.32□□□□□ -1.24
SF3A1-203ENST00000444440 MSRB1Q9NZV6 116 aa7.32□□□□□ -1.24
SF3A1-203ENST00000444440 XKRY2A2RUG3 117 aa7.31□□□□□ -1.24
SF3A1-203ENST00000444440 RBFOX3A6NFN3 312 aa7.31□□□□□ -1.24
SF3A1-203ENST00000444440 M0R381 172 aa7.31□□□□□ -1.24
SF3A1-203ENST00000444440 CRYGDP07320 174 aa7.31□□□□□ -1.24
SF3A1-203ENST00000444440 TIRAPP58753 221 aa7.31□□□□□ -1.24
SF3A1-203ENST00000444440 C14orf178Q8N769 122 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-203ENST00000444440 LYPD6BQ8NI32 183 aa7.31□□□□□ -1.24
SF3A1-203ENST00000444440 SFRP2Q96HF1 295 aa7.31□□□□□ -1.24
SF3A1-203ENST00000444440 A0A087WTM6 91 aa7.3□□□□□ -1.24
SF3A1-203ENST00000444440 IGHV3-38A0A0C4DH36 116 aa7.3□□□□□ -1.24
SF3A1-203ENST00000444440 K7EP13 123 aa7.3□□□□□ -1.24
SF3A1-203ENST00000444440 MAPKAPK5-AS1Q8N8E1 139 aa7.3□□□□□ -1.24
SF3A1-203ENST00000444440 EIF5A2Q9GZV4 153 aaKnown RBP7.3□□□□□ -1.24
SF3A1-203ENST00000444440 VPS13BQ7Z7G8 4022 aa7.3□□□□□ -1.24
SF3A1-203ENST00000444440 TRAV8-6A0A0B4J262 113 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 GAGE12JA6NER3 117 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 TMEM250H0YL14 139 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 IGLV2-8P01709 118 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 P01737 135 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 IGHV3-30P01768 117 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 IGHV3-33P01772 117 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 OR5AL1P0C617 328 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 IGHV3-30-3P0DP02 117 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 IGHV3-30-5P0DP03 117 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 EVI2AP22794 236 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 RPL19P84098 196 aaKnown RBP7.29□□□□□ -1.24
SF3A1-203ENST00000444440 GAGE1Q13065 139 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 GAGE4Q13068 117 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 GAGE5Q13069 117 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 GAGE13Q4V321 117 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 LINC01556Q5JQF7 62 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 FAM74A4Q5TZK3 123 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 SPANXN1Q5VSR9 72 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 OR2D3Q8NGH3 330 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 ATP6V0E2Q8NHE4 81 aa7.29□□□□□ -1.24
SF3A1-203ENST00000444440 SSBP4Q9BWG4 385 aaPredicted RBP7.29□□□□□ -1.24
SF3A1-203ENST00000444440 A0A087WWL8 130 aa7.28□□□□□ -1.24
SF3A1-203ENST00000444440 LRCOL1A6NCL2 159 aa7.28□□□□□ -1.24
SF3A1-203ENST00000444440 SNAI2O43623 268 aa7.28□□□□□ -1.24
SF3A1-203ENST00000444440 NDUFS6O75380 124 aaKnown RBP7.28□□□□□ -1.24
SF3A1-203ENST00000444440 ERVFC1-1P60608 527 aa7.28□□□□□ -1.24
SF3A1-203ENST00000444440 OR10J3Q5JRS4 329 aa7.28□□□□□ -1.24
SF3A1-203ENST00000444440 LELP1Q5T871 98 aa7.28□□□□□ -1.24
SF3A1-203ENST00000444440 NFE4Q86UQ8 179 aa7.28□□□□□ -1.24
SF3A1-203ENST00000444440 GTSF1LQ9H1H1 148 aa7.28□□□□□ -1.24
SF3A1-203ENST00000444440 C19orf71A6NCJ1 209 aa7.27□□□□□ -1.25
SF3A1-203ENST00000444440 IBA57-AS1B1ANH7 110 aa7.27□□□□□ -1.25
SF3A1-203ENST00000444440 F2Z2F3 143 aa7.27□□□□□ -1.25
SF3A1-203ENST00000444440 SMIM17P0DL12 118 aa7.27□□□□□ -1.25
SF3A1-203ENST00000444440 KRTAP10-1P60331 282 aa7.27□□□□□ -1.25
SF3A1-203ENST00000444440 RAB4BP61018 213 aa7.27□□□□□ -1.25
SF3A1-203ENST00000444440 OR10AG1Q8NH19 301 aa7.27□□□□□ -1.25
SF3A1-203ENST00000444440 OCC1Q8TAD7 63 aa7.27□□□□□ -1.25
SF3A1-203ENST00000444440 Q9HAA7 133 aa7.27□□□□□ -1.25
SF3A1-203ENST00000444440 TRBV20OR9-2A0A075B6H5 130 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 F5H697 171 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 CEBPGP53567 150 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 XGP55808 180 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 CACNG7P62955 275 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 WFDC2Q14508 124 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 TOR2AQ5JU69 321 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 Q8N1X5 172 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 C10orf126Q8N4M7 172 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 FER1L6-AS1Q8NA97 138 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 NUDT10Q8NFP7 164 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 NUDT11Q96G61 164 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 DNAJC30Q96LL9 226 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 FAM210AQ96ND0 272 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 TPPP3Q9BW30 176 aa7.26□□□□□ -1.25
SF3A1-203ENST00000444440 A0A087WWC5 75 aa7.25□□□□□ -1.25
SF3A1-203ENST00000444440 MUC21A0A0G2JKD1 596 aa7.25□□□□□ -1.25
SF3A1-203ENST00000444440 TRBV10-1A0A0K0K1A3 114 aa7.25□□□□□ -1.25
SF3A1-203ENST00000444440 MUC21A0A140T8X8 626 aa7.25□□□□□ -1.25
SF3A1-203ENST00000444440 SSTP61278 116 aa7.25□□□□□ -1.25
SF3A1-203ENST00000444440 RPL36AP83881 106 aaKnown RBP7.25□□□□□ -1.25
SF3A1-203ENST00000444440 WDR73Q6P4I2 378 aa7.25□□□□□ -1.25
SF3A1-203ENST00000444440 TEX261Q6UWH6 196 aa7.25□□□□□ -1.25
SF3A1-203ENST00000444440 DAZ4Q86SG3 579 aaKnown RBP7.25□□□□□ -1.25
SF3A1-203ENST00000444440 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.25□□□□□ -1.25
SF3A1-203ENST00000444440 RPL36ALQ969Q0 106 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms