RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 CTRLP40313 264 aa12.51□□□□□ -0.41
CIRBP-203ENST00000444172 TWIST1Q15672 202 aa12.51□□□□□ -0.41
CIRBP-203ENST00000444172 WDR73Q6P4I2 378 aa12.51□□□□□ -0.41
CIRBP-203ENST00000444172 C14orf178Q8N769 122 aaPredicted RBP12.51□□□□□ -0.41
CIRBP-203ENST00000444172 BORCS7Q96B45 105 aa12.51□□□□□ -0.41
CIRBP-203ENST00000444172 STARD9Q9P2P6 4700 aa12.51□□□□□ -0.41
CIRBP-203ENST00000444172 PPP1R2P9O14990 202 aa12.5□□□□□ -0.41
CIRBP-203ENST00000444172 FOXA3P55318 350 aaPredicted RBP12.5□□□□□ -0.41
CIRBP-203ENST00000444172 RNF212Q495C1 297 aa12.5□□□□□ -0.41
CIRBP-203ENST00000444172 UFSP1Q6NVU6 142 aa12.5□□□□□ -0.41
CIRBP-203ENST00000444172 AP1S3Q96PC3 154 aa12.5□□□□□ -0.41
CIRBP-203ENST00000444172 FAM231BA6NCW3 169 aa12.49□□□□□ -0.41
CIRBP-203ENST00000444172 H3BNG1 76 aa12.49□□□□□ -0.41
CIRBP-203ENST00000444172 MT-ND4LP03901 98 aa12.49□□□□□ -0.41
CIRBP-203ENST00000444172 ZNF56Q15929 161 aa12.49□□□□□ -0.41
CIRBP-203ENST00000444172 SLC25A29Q8N8R3 303 aa12.49□□□□□ -0.41
CIRBP-203ENST00000444172 PRADC1Q9BSG0 188 aa12.49□□□□□ -0.41
CIRBP-203ENST00000444172 ICOSQ9Y6W8 199 aa12.49□□□□□ -0.41
CIRBP-203ENST00000444172 F5H697 171 aa12.48□□□□□ -0.41
CIRBP-203ENST00000444172 LY6G6CO95867 125 aa12.48□□□□□ -0.41
CIRBP-203ENST00000444172 TRGC1P0CF51 173 aa12.48□□□□□ -0.41
CIRBP-203ENST00000444172 GYPEP15421 78 aa12.48□□□□□ -0.41
CIRBP-203ENST00000444172 Q6ZSN1 163 aa12.48□□□□□ -0.41
CIRBP-203ENST00000444172 ANAPC16Q96DE5 110 aa12.48□□□□□ -0.41
CIRBP-203ENST00000444172 NAT8BQ9UHF3 227 aa12.48□□□□□ -0.41
CIRBP-203ENST00000444172 DYNC2H1Q8NCM8 4307 aaKnown RBP12.48□□□□□ -0.41
CIRBP-203ENST00000444172 A0A096LPF7 62 aa12.47□□□□□ -0.41
CIRBP-203ENST00000444172 LOC100131303A0A0U1RQF7 123 aa12.47□□□□□ -0.41
CIRBP-203ENST00000444172 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
CIRBP-203ENST00000444172 MGPP08493 103 aa12.47□□□□□ -0.41
CIRBP-203ENST00000444172 EVI2AP22794 236 aa12.47□□□□□ -0.41
CIRBP-203ENST00000444172 RHOHQ15669 191 aa12.47□□□□□ -0.41
CIRBP-203ENST00000444172 NUP35Q8NFH5 326 aa12.47□□□□□ -0.41
CIRBP-203ENST00000444172 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
CIRBP-203ENST00000444172 A0A1B0GUT8 65 aa12.46□□□□□ -0.41
CIRBP-203ENST00000444172 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.41
CIRBP-203ENST00000444172 K7EQD1 137 aa12.46□□□□□ -0.41
CIRBP-203ENST00000444172 MRPL23Q16540 153 aaKnown RBP12.46□□□□□ -0.41
CIRBP-203ENST00000444172 C10orf91Q5T1B1 145 aa12.46□□□□□ -0.41
CIRBP-203ENST00000444172 KIF25-AS1Q9Y6Z4 181 aa12.46□□□□□ -0.41
CIRBP-203ENST00000444172 SRIP30626 198 aa12.45□□□□□ -0.42
CIRBP-203ENST00000444172 RAB4BP61018 213 aa12.45□□□□□ -0.42
CIRBP-203ENST00000444172 SMIM15Q7Z3B0 74 aa12.45□□□□□ -0.42
CIRBP-203ENST00000444172 UBE2DNLQ8IWF7 75 aa12.45□□□□□ -0.42
CIRBP-203ENST00000444172 SLC7A5P1Q8MH63 180 aa12.45□□□□□ -0.42
CIRBP-203ENST00000444172 DPH3P1Q9H4G8 78 aa12.45□□□□□ -0.42
CIRBP-203ENST00000444172 P0DMU3 169 aa12.44□□□□□ -0.42
CIRBP-203ENST00000444172 FAM231AP0DMU4 169 aa12.44□□□□□ -0.42
CIRBP-203ENST00000444172 FAM231CP0DMU5 169 aa12.44□□□□□ -0.42
CIRBP-203ENST00000444172 RIGQ13278 110 aa12.44□□□□□ -0.42
CIRBP-203ENST00000444172 LGALS9CQ6DKI2 356 aa12.44□□□□□ -0.42
CIRBP-203ENST00000444172 LINC00476Q8WZB0 136 aa12.44□□□□□ -0.42
CIRBP-203ENST00000444172 CARHSP1Q9Y2V2 147 aaKnown RBP12.44□□□□□ -0.42
CIRBP-203ENST00000444172 CCL18P55774 89 aa12.43□□□□□ -0.42
CIRBP-203ENST00000444172 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
CIRBP-203ENST00000444172 APOC3P02656 99 aa12.42□□□□□ -0.42
CIRBP-203ENST00000444172 FAM3BP58499 235 aaPredicted RBP12.42□□□□□ -0.42
CIRBP-203ENST00000444172 LINC00315P59091 139 aa12.42□□□□□ -0.42
CIRBP-203ENST00000444172 GAGE1Q13065 139 aa12.42□□□□□ -0.42
CIRBP-203ENST00000444172 GAGE4Q13068 117 aa12.42□□□□□ -0.42
CIRBP-203ENST00000444172 GAGE5Q13069 117 aa12.42□□□□□ -0.42
CIRBP-203ENST00000444172 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
CIRBP-203ENST00000444172 GAGE13Q4V321 117 aa12.42□□□□□ -0.42
CIRBP-203ENST00000444172 NEGR1Q7Z3B1 354 aa12.42□□□□□ -0.42
CIRBP-203ENST00000444172 LCE6AA0A183 80 aa12.41□□□□□ -0.42
CIRBP-203ENST00000444172 ESRGQ1W209 222 aa12.41□□□□□ -0.42
CIRBP-203ENST00000444172 CLRN3Q8NCR9 226 aa12.41□□□□□ -0.42
CIRBP-203ENST00000444172 Q9UF83 564 aa12.41□□□□□ -0.42
CIRBP-203ENST00000444172 PLECQ15149 4684 aaKnown RBP12.41□□□□□ -0.42
CIRBP-203ENST00000444172 TENM2Q9NT68 2774 aa12.4□□□□□ -0.42
CIRBP-203ENST00000444172 MRPL54Q6P161 138 aaKnown RBP12.4□□□□□ -0.42
CIRBP-203ENST00000444172 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
CIRBP-203ENST00000444172 CTDSP1Q9GZU7 261 aa12.4□□□□□ -0.42
CIRBP-203ENST00000444172 C7orf77A4D0Y5 90 aa12.39□□□□□ -0.43
CIRBP-203ENST00000444172 CAMPP49913 170 aa12.39□□□□□ -0.43
CIRBP-203ENST00000444172 SUMO4Q6EEV6 95 aa12.39□□□□□ -0.43
CIRBP-203ENST00000444172 SH2D6Q7Z4S9 175 aa12.39□□□□□ -0.43
CIRBP-203ENST00000444172 RPS10P5Q9NQ39 176 aa12.39□□□□□ -0.43
CIRBP-203ENST00000444172 LINC00588Q9Y4M8 146 aa12.39□□□□□ -0.43
CIRBP-203ENST00000444172 TRBV10-1A0A0K0K1A3 114 aa12.38□□□□□ -0.43
CIRBP-203ENST00000444172 H7C1H1 209 aa12.38□□□□□ -0.43
CIRBP-203ENST00000444172 RPL36AP83881 106 aaKnown RBP12.38□□□□□ -0.43
CIRBP-203ENST00000444172 LYPD5Q6UWN5 251 aa12.38□□□□□ -0.43
CIRBP-203ENST00000444172 ATP6V0E2Q8NHE4 81 aa12.38□□□□□ -0.43
CIRBP-203ENST00000444172 RPL36ALQ969Q0 106 aaKnown RBP12.38□□□□□ -0.43
CIRBP-203ENST00000444172 TMEM191AQ9H0A3 160 aa12.38□□□□□ -0.43
CIRBP-203ENST00000444172 RHEBQ15382 184 aa12.37□□□□□ -0.43
CIRBP-203ENST00000444172 SVBPQ8N300 66 aa12.37□□□□□ -0.43
CIRBP-203ENST00000444172 TRBV7-3A0A075B6L6 115 aa12.36□□□□□ -0.43
CIRBP-203ENST00000444172 TRAV26-2A0A0B4J265 109 aa12.36□□□□□ -0.43
CIRBP-203ENST00000444172 A0A1B0GW15 77 aa12.36□□□□□ -0.43
CIRBP-203ENST00000444172 M0QY20 66 aa12.36□□□□□ -0.43
CIRBP-203ENST00000444172 SNAPINO95295 136 aa12.36□□□□□ -0.43
CIRBP-203ENST00000444172 HBBP68871 147 aa12.36□□□□□ -0.43
CIRBP-203ENST00000444172 KCNIP4Q6PIL6 250 aa12.36□□□□□ -0.43
CIRBP-203ENST00000444172 NEXN-AS1Q8NBZ9 246 aa12.36□□□□□ -0.43
CIRBP-203ENST00000444172 S100A8P05109 93 aa12.35□□□□□ -0.43
CIRBP-203ENST00000444172 RASL11AQ6T310 242 aa12.35□□□□□ -0.43
CIRBP-203ENST00000444172 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
CIRBP-203ENST00000444172 GATD1Q8NB37 220 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms