RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 SEM1Q6ZVN7 128 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 MUSTN1Q8IVN3 82 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 JPT2Q9H910 190 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 MBD3L4A6NDZ8 208 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-214ENST00000441542 MBD3L3A6NE82 208 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-214ENST00000441542 MBD3L5A6NJ08 208 aaPredicted RBP5.75□□□□□ -1.49
HDAC9-214ENST00000441542 H3BMM0 161 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 TMEM178BH3BS89 294 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 SRD5A1P18405 259 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 DEFB109BQ30KR1 87 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 LINC01620Q4KN68 170 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 ORMDL2Q53FV1 153 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 UBE2WQ96B02 151 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 ODF3Q96PU9 254 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 C2CD3Q4AC94 2353 aa5.75□□□□□ -1.49
HDAC9-214ENST00000441542 TRAV8-3A0A0A6YYJ7 113 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 FAM236AA0A1B0GUQ0 79 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 FAM236BA0A1B0GV22 79 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 OOSP1A8MZH6 123 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 BUB1B-PAK6H3BSN5 160 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 EEF1AKMT3Q96AZ1 226 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 COL12A1Q99715 3063 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 RBAKDNA6NC62 111 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 GNRH2O43555 120 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 IGHV3-30P01768 117 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 LINC00694P0DN24 101 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 IGHV3-30-5P0DP03 117 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 ZNF22P17026 224 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-214ENST00000441542 PDE6HQ13956 83 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 RNASE13Q5GAN3 156 aaKnown RBP5.74□□□□□ -1.49
HDAC9-214ENST00000441542 SORL1Q92673 2214 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 TINCRA0A1B0GVN0 87 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 BSPH1Q075Z2 132 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 PRR9Q5T870 116 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 C9orf153Q5TBE3 101 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 CLEC19AQ6UXS0 136 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 LINC00574Q9H8X3 128 aa5.74□□□□□ -1.49
HDAC9-214ENST00000441542 F6UB75 175 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 J3QQQ9 107 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 CDX4O14627 284 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-214ENST00000441542 RNASE4P34096 147 aaKnown RBP5.73□□□□□ -1.49
HDAC9-214ENST00000441542 PMVKQ15126 192 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 CEMP1Q6PRD7 247 aaPredicted RBP5.73□□□□□ -1.49
HDAC9-214ENST00000441542 C16orf92Q96LL3 132 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 FANCD2OSQ96PS1 177 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 IGHV7-4-1A0A0J9YVY3 117 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 IGHV3-33P01772 117 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 LINC01559Q495D7 138 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 Q6ZS92 163 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 STHQ8IWL8 128 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 DAND5Q8N907 189 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 OR10J6PQ8NGY7 276 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 TOMM6Q96B49 74 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 LINC00477Q96M19 166 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 CHD6Q8TD26 2715 aa5.73□□□□□ -1.49
HDAC9-214ENST00000441542 TRGV11A0A075B6L2 103 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 ATXN8Q156A1 80 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 TMEM30BQ3MIR4 351 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 MYO18BQ8IUG5 2567 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 TRAV12-1A0A0B4J245 112 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 EIF4EBP3O60516 100 aaPredicted RBP5.72□□□□□ -1.49
HDAC9-214ENST00000441542 IGKV3-20P01619 116 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 PKD1L2Q7Z442 2459 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 TRAV41A0A0B4J266 112 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 TRIAP1O43715 76 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 CTSGP08311 255 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 COX6B1P14854 86 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 ASIPP42127 132 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 ZNF415Q09FC8 603 aa5.72□□□□□ -1.49
HDAC9-214ENST00000441542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.71□□□□□ -1.49
HDAC9-214ENST00000441542 CRYGDP07320 174 aa5.71□□□□□ -1.49
HDAC9-214ENST00000441542 C15orf32Q32M92 178 aa5.71□□□□□ -1.49
HDAC9-214ENST00000441542 ZNRF2Q8NHG8 242 aa5.71□□□□□ -1.49
HDAC9-214ENST00000441542 EDA2RQ9HAV5 297 aa5.71□□□□□ -1.49
HDAC9-214ENST00000441542 TRAV17A0A0B4J275 112 aa5.71□□□□□ -1.5
HDAC9-214ENST00000441542 F8W735 103 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-214ENST00000441542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.71□□□□□ -1.5
HDAC9-214ENST00000441542 APRG1Q8IVJ8 170 aa5.71□□□□□ -1.5
HDAC9-214ENST00000441542 LINC00311Q8N616 119 aa5.71□□□□□ -1.5
HDAC9-214ENST00000441542 RELNP78509 3460 aa5.71□□□□□ -1.5
HDAC9-214ENST00000441542 IGLV4-69A0A075B6H9 119 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 UBE2E1P51965 193 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 SLC25A29Q8N8R3 303 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 SLC50A1Q9BRV3 221 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 PRO0628Q9UI54 55 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 ASH1LQ9NR48 2969 aaKnown RBP5.7□□□□□ -1.5
HDAC9-214ENST00000441542 A0A0J9YXV3 536 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 G3V318 75 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 TSHBP01222 138 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 HTN1P15515 57 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 PLA2G2CQ5R387 149 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 LINC00336Q6ZUF6 198 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 CNFNQ9BYD5 112 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 DPH3P1Q9H4G8 78 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 NACAE9PAV3 2078 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 LRBAP50851 2863 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 IGLV1-47P01700 117 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 KLRB1Q12918 225 aa5.7□□□□□ -1.5
HDAC9-214ENST00000441542 ZNF625Q96I27 306 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-214ENST00000441542 FAM215AQ9Y5M1 114 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms