RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 SLAQ13239 276 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 TWIST1Q15672 202 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 ZNF56Q15929 161 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 FAM74A4Q5TZK3 123 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 ATP5L2Q7Z4Y8 100 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 SLC7A5P1Q8MH63 180 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 C11orf72Q8NBR9 251 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 CLRN3Q8NCR9 226 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 OR4C5Q8NGB2 326 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 PTH2Q96A98 100 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 PGLYRP4Q96LB8 373 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 C9orf85Q96MD7 179 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 IMMP2LQ96T52 175 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 MDFICQ9P1T7 246 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 C11orf21Q9P2W6 132 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 DKK2Q9UBU2 259 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 TP53TG3Q9ULZ0 132 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 V9GYV3 84 aa3.57□□□□□ -1.84
CCDC140-202ENST00000440903 SMIM27A0A1W2PRY6 76 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 C7orf77A4D0Y5 90 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 F5H697 171 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 SPINK4O60575 86 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 MGPP08493 103 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 RNASE3P12724 160 aaKnown RBP3.56□□□□□ -1.84
CCDC140-202ENST00000440903 HBBP68871 147 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 COX19Q49B96 90 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 C10orf91Q5T1B1 145 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 WDR73Q6P4I2 378 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 LYZL1Q6UWQ5 148 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 Q6ZTI0 123 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 OR10AG1Q8NH19 301 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 C18orf15Q96N68 181 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 WWC2-AS2Q96NR7 200 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 DPH3P1Q9H4G8 78 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 TMEM242Q9NWH2 141 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 KLK5Q9Y337 293 aaPredicted RBP3.56□□□□□ -1.84
CCDC140-202ENST00000440903 AGRNO00468 2067 aa3.56□□□□□ -1.84
CCDC140-202ENST00000440903 F5H768 121 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 ATP6V1G1O75348 118 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 NXPH4O95158 308 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 IGHV3-53P01767 116 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 MT-ND6P03923 174 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 NANOS2P60321 138 aaKnown RBP3.55□□□□□ -1.84
CCDC140-202ENST00000440903 RAB4BP61018 213 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 SSTP61278 116 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 RHOHQ15669 191 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 MRPL54Q6P161 138 aaKnown RBP3.55□□□□□ -1.84
CCDC140-202ENST00000440903 RASL11AQ6T310 242 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 ZFP2Q6ZN57 461 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 Q6ZQT7 251 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 NUP35Q8NFH5 326 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 GTSF1Q8WW33 167 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 RASL10AQ92737 203 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 FAM210BQ96KR6 192 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 PRADC1Q9BSG0 188 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 CNFNQ9BYD5 112 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 SCRT2Q9NQ03 307 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 SMCO4Q9NRQ5 59 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 CELA1Q9UNI1 258 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 MEGF8Q7Z7M0 2845 aa3.55□□□□□ -1.84
CCDC140-202ENST00000440903 TGP01266 2768 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 DNAH3Q8TD57 4116 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 IGHV4-4A0A075B6R2 117 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 DEFB131BA0A096LNP1 70 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 MUC21A0A0G2JKD1 596 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 MUC21A0A140T8X8 626 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 PLAC8L1A1L4L8 177 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 K7EQD1 137 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 RS1O15537 224 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 PPP1R17O96001 155 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 PRM2P04554 102 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 NTF3P20783 257 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 CAMPP49913 170 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 FOXA3P55318 350 aaPredicted RBP3.54□□□□□ -1.84
CCDC140-202ENST00000440903 TCTAP57738 103 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 Q6ZTC4 211 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 Q8N1X5 172 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 LINC00612Q8N6U2 182 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 C15orf53Q8NAA6 179 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 FRZBQ92765 325 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 TMEM191AQ9H0A3 160 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 EDA2RQ9HAV5 297 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 PRO0255Q9UI72 69 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 ICOSQ9Y6W8 199 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 URGCP-MRPS24S4R325 110 aa3.54□□□□□ -1.84
CCDC140-202ENST00000440903 A0A087WWL8 130 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 IGHV3-73A0A0B4J1V6 119 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 TRBV10-1A0A0K0K1A3 114 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 TRBV6-4A0A1B0GX49 114 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 HLA-DQA1P01909 254 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 PPBPP02775 128 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 PLA2G1BP04054 148 aaKnown RBP3.53□□□□□ -1.84
CCDC140-202ENST00000440903 SRIP30626 198 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 FAM3BP58499 235 aaPredicted RBP3.53□□□□□ -1.84
CCDC140-202ENST00000440903 RPL36AP83881 106 aaKnown RBP3.53□□□□□ -1.84
CCDC140-202ENST00000440903 C12orf74Q32Q52 190 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 CFAP126Q5VTH2 177 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 SH2D6Q7Z4S9 175 aa3.53□□□□□ -1.84
CCDC140-202ENST00000440903 C14orf178Q8N769 122 aaPredicted RBP3.53□□□□□ -1.84
CCDC140-202ENST00000440903 MUC7Q8TAX7 377 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms