RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 IGHV3-53P01767 116 aa11.05□□□□□ -0.64
CPSF7-205ENST00000439958 ODF3Q96PU9 254 aa11.05□□□□□ -0.64
CPSF7-205ENST00000439958 ZNF705AQ6ZN79 300 aaPredicted RBP11.05□□□□□ -0.64
CPSF7-205ENST00000439958 VAMP8Q9BV40 100 aa11.05□□□□□ -0.64
CPSF7-205ENST00000439958 TSTD3H0UI37 97 aa11.04□□□□□ -0.64
CPSF7-205ENST00000439958 ESDP10768 282 aa11.04□□□□□ -0.64
CPSF7-205ENST00000439958 IGLL1P15814 213 aa11.04□□□□□ -0.64
CPSF7-205ENST00000439958 AZU1P20160 251 aa11.04□□□□□ -0.64
CPSF7-205ENST00000439958 MAP1LC3CQ9BXW4 147 aa11.04□□□□□ -0.64
CPSF7-205ENST00000439958 TRGV1A0A0A0MS02 117 aa11.04□□□□□ -0.64
CPSF7-205ENST00000439958 TRAV2A0A0B4J234 112 aa11.04□□□□□ -0.64
CPSF7-205ENST00000439958 RIPPLY3P57055 190 aa11.04□□□□□ -0.64
CPSF7-205ENST00000439958 GATD1Q8NB37 220 aa11.03□□□□□ -0.64
CPSF7-205ENST00000439958 TMEM70Q9BUB7 260 aa11.03□□□□□ -0.64
CPSF7-205ENST00000439958 NUDT3O95989 172 aa11.03□□□□□ -0.64
CPSF7-205ENST00000439958 MAJINQ3KP22 176 aa11.02□□□□□ -0.64
CPSF7-205ENST00000439958 ZNF415Q09FC8 603 aa11.02□□□□□ -0.65
CPSF7-205ENST00000439958 HSPB8Q9UJY1 196 aa11.02□□□□□ -0.65
CPSF7-205ENST00000439958 KRTAP24-1Q3LI83 254 aa11.02□□□□□ -0.65
CPSF7-205ENST00000439958 MGAM2Q2M2H8 2515 aa11.02□□□□□ -0.65
CPSF7-205ENST00000439958 PRSS1P07477 247 aa11.01□□□□□ -0.65
CPSF7-205ENST00000439958 ZNF664Q8N3J9 261 aa11.01□□□□□ -0.65
CPSF7-205ENST00000439958 TMEM158Q8WZ71 300 aa11.01□□□□□ -0.65
CPSF7-205ENST00000439958 CSTL1Q9H114 145 aa11.01□□□□□ -0.65
CPSF7-205ENST00000439958 PKD1L1Q8TDX9 2849 aa11.01□□□□□ -0.65
CPSF7-205ENST00000439958 HBDP02042 147 aa11.01□□□□□ -0.65
CPSF7-205ENST00000439958 SUMO4Q6EEV6 95 aa11.01□□□□□ -0.65
CPSF7-205ENST00000439958 SUMO2P61956 95 aaKnown RBP11.01□□□□□ -0.65
CPSF7-205ENST00000439958 TRPT1Q86TN4 253 aaKnown RBP11.01□□□□□ -0.65
CPSF7-205ENST00000439958 P0DMU3 169 aa11□□□□□ -0.65
CPSF7-205ENST00000439958 FAM231AP0DMU4 169 aa11□□□□□ -0.65
CPSF7-205ENST00000439958 FAM231CP0DMU5 169 aa11□□□□□ -0.65
CPSF7-205ENST00000439958 NXT2Q9NPJ8 142 aaKnown RBP11□□□□□ -0.65
CPSF7-205ENST00000439958 SCRT2Q9NQ03 307 aa11□□□□□ -0.65
CPSF7-205ENST00000439958 U3KQK5 164 aa11□□□□□ -0.65
CPSF7-205ENST00000439958 RASL10AQ92737 203 aa11□□□□□ -0.65
CPSF7-205ENST00000439958 C20orf202A1L168 122 aa11□□□□□ -0.65
CPSF7-205ENST00000439958 LINC00587B1AMM8 73 aa11□□□□□ -0.65
CPSF7-205ENST00000439958 IGHV4-4A0A075B6R2 117 aa10.99□□□□□ -0.65
CPSF7-205ENST00000439958 C9orf66Q5T8R8 295 aa10.99□□□□□ -0.65
CPSF7-205ENST00000439958 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
CPSF7-205ENST00000439958 NOP10Q9NPE3 64 aaKnown RBP10.99□□□□□ -0.65
CPSF7-205ENST00000439958 NRACQ8N912 160 aa10.99□□□□□ -0.65
CPSF7-205ENST00000439958 GOLT1BQ9Y3E0 138 aa10.99□□□□□ -0.65
CPSF7-205ENST00000439958 SYS1-DBNDD2H3BUS1 97 aa10.98□□□□□ -0.65
CPSF7-205ENST00000439958 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
CPSF7-205ENST00000439958 C1orf158Q8N1D5 194 aa10.98□□□□□ -0.65
CPSF7-205ENST00000439958 C9orf85Q96MD7 179 aa10.98□□□□□ -0.65
CPSF7-205ENST00000439958 ST20Q9HBF5 79 aa10.98□□□□□ -0.65
CPSF7-205ENST00000439958 MED14OSP0DP75 135 aa10.98□□□□□ -0.65
CPSF7-205ENST00000439958 SPATA12Q7Z6I5 190 aa10.98□□□□□ -0.65
CPSF7-205ENST00000439958 SMIM2Q9BVW6 85 aa10.98□□□□□ -0.65
CPSF7-205ENST00000439958 FCER1GP30273 86 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 C12orf54Q6X4T0 127 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 CITED1Q99966 193 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 TRGV2A0A075B6R0 118 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 M0R2P5 195 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 SPATA45Q537H7 98 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 DEFB4AO15263 64 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 LAGE3Q14657 143 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 RRN3P1Q2M238 152 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 Q8N8P6 123 aa10.97□□□□□ -0.65
CPSF7-205ENST00000439958 hDV102S1A0JD36 115 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 SDHAF1A6NFY7 115 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 CMC4P56277 68 aaPredicted RBP10.96□□□□□ -0.65
CPSF7-205ENST00000439958 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 GAGE12BA1L429 117 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 GAGE7O76087 117 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 GAGE12FP0CL80 117 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 GAGE12GP0CL81 117 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 GAGE12IP0CL82 117 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 PKIAP61925 76 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 C14orf144Q96I85 54 aa10.96□□□□□ -0.65
CPSF7-205ENST00000439958 BEAN1Q3B7T3 259 aa10.96□□□□□ -0.66
CPSF7-205ENST00000439958 ZNF747Q9BV97 191 aa10.96□□□□□ -0.66
CPSF7-205ENST00000439958 LAMTOR2Q9Y2Q5 125 aa10.96□□□□□ -0.66
CPSF7-205ENST00000439958 HSBP1L1C9JCN9 74 aa10.95□□□□□ -0.66
CPSF7-205ENST00000439958 DEFB130BP0DP73 79 aa10.95□□□□□ -0.66
CPSF7-205ENST00000439958 DEFB130AP0DP74 79 aa10.95□□□□□ -0.66
CPSF7-205ENST00000439958 Q6ZTI0 123 aa10.95□□□□□ -0.66
CPSF7-205ENST00000439958 A0A096LNJ9 63 aa10.95□□□□□ -0.66
CPSF7-205ENST00000439958 IGHV3-38A0A0C4DH36 116 aa10.95□□□□□ -0.66
CPSF7-205ENST00000439958 CRYGDP07320 174 aa10.95□□□□□ -0.66
CPSF7-205ENST00000439958 PHLDA1Q8WV24 401 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-205ENST00000439958 KIR2DL4Q99706 377 aa10.95□□□□□ -0.66
CPSF7-205ENST00000439958 DEFB135Q30KP9 77 aa10.95□□□□□ -0.66
CPSF7-205ENST00000439958 BATFQ16520 125 aa10.94□□□□□ -0.66
CPSF7-205ENST00000439958 OR4C5Q8NGB2 326 aa10.94□□□□□ -0.66
CPSF7-205ENST00000439958 ZMAT5Q9UDW3 170 aaKnown RBP10.94□□□□□ -0.66
CPSF7-205ENST00000439958 C1QTNF4Q9BXJ3 329 aa10.94□□□□□ -0.66
CPSF7-205ENST00000439958 Q9UF83 564 aa10.94□□□□□ -0.66
CPSF7-205ENST00000439958 NBEAL1Q6ZS30 2694 aa10.94□□□□□ -0.66
CPSF7-205ENST00000439958 C19orf73Q9NVV2 129 aa10.93□□□□□ -0.66
CPSF7-205ENST00000439958 DDTP30046 118 aa10.93□□□□□ -0.66
CPSF7-205ENST00000439958 DEFA6Q01524 100 aa10.93□□□□□ -0.66
CPSF7-205ENST00000439958 TNFRSF18Q9Y5U5 241 aa10.93□□□□□ -0.66
CPSF7-205ENST00000439958 Q6ZN92 141 aa10.92□□□□□ -0.66
CPSF7-205ENST00000439958 SCGB3A1Q96QR1 104 aa10.92□□□□□ -0.66
CPSF7-205ENST00000439958 KIF25-AS1Q9Y6Z4 181 aa10.92□□□□□ -0.66
CPSF7-205ENST00000439958 LINC00315P59091 139 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms