RNA–Protein interactions for RNA: ENST00000439547.5

AC108488.1-202, humanhuman

TSL 3 BASIC

Gene AC108488.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108488.1-202ENST00000439547 GAGE12HA6NDE8 117 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 OR11H12B2RN74 326 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 H3BMG7 143 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 H3BUX3 64 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 BUB3O43684 328 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 BRI3O95415 125 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 IGKV2D-40P01614 121 aaPredicted RBP4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 ORM1P02763 201 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 CLEC3BP05452 202 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 ZNF80P51504 273 aaPredicted RBP4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 PROK1P58294 105 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 GAGE13Q4V321 117 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 LCE2CQ5TA81 110 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 DYNAPQ8N1N2 210 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 OR11H1Q8NG94 326 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 OR11H2Q8NH07 326 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 TOMM6Q96B49 74 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 CITED1Q99966 193 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 PRO0461Q9UI25 63 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 U3KQE9 123 aa4.84□□□□□ -1.63
AC108488.1-202ENST00000439547 TRBV20-1A0A075B6N2 111 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 TMSB15BA0A087X1C1 80 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 TRBV7-1A0A0A6YYK4 115 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 MYMXA0A1B0GTQ4 84 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 RPL24P83731 157 aaKnown RBP4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 LY6EQ16553 131 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 TMEM78Q5T7P6 136 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 HIST2H2BDQ6DRA6 164 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 RAB37Q96AX2 223 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 LINC00477Q96M19 166 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 LINC01600Q96MT4 127 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 SMIM2Q9BVW6 85 aa4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 NHP2Q9NX24 153 aaKnown RBP4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 MRPL35Q9NZE8 188 aaKnown RBP4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 TIMM8BQ9Y5J9 83 aaPredicted RBP4.83□□□□□ -1.64
AC108488.1-202ENST00000439547 DNAH3Q8TD57 4116 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 IGHV4OR15-8A0A075B7B6 117 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 A0A087WW49 117 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 IGKV3D-20A0A0C4DH25 116 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 IGHV7-4-1A0A0J9YVY3 117 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 SMKR1H3BMG3 65 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 WIPF1O43516 503 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 TMEM11P17152 192 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 AZU1P20160 251 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 UBE2D1P51668 147 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 CRIP2P52943 208 aaPredicted RBP4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 TCTAP57738 103 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 ERCC8Q13216 396 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 GTSCR1Q86UQ5 136 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 APRG1Q8IVJ8 170 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 SBSPONQ8IVN8 264 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 NEXN-AS1Q8NBZ9 246 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 HIST1H4GQ99525 98 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 AGPAT4-IT1Q9H0P7 198 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 C16orf95Q9H693 158 aa4.82□□□□□ -1.64
AC108488.1-202ENST00000439547 IGHV7-81A0A0B4J1V7 117 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 OVOL1O14753 267 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 NXPH4O95158 308 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 APELAP0DMC3 54 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 PF4V1P10720 104 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 TMEM219Q86XT9 240 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 DLX4Q92988 240 aaPredicted RBP4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 EEF1AKMT3Q96AZ1 226 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 TMEM141Q96I45 108 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 C18orf15Q96N68 181 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 SPAG8Q99932 426 aaPredicted RBP4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 DPH3P1Q9H4G8 78 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 SPANXA1Q9NS26 97 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 MSRB1Q9NZV6 116 aa4.81□□□□□ -1.64
AC108488.1-202ENST00000439547 TRAV21A0A0B4J279 112 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 A6NDX4 124 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 TMEM262E9PQX1 116 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 UBE2D3P61077 147 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 HERVK_113P61574 105 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 SUMO2P61956 95 aaKnown RBP4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 UBE2D2P62837 147 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 RPL11P62913 178 aaKnown RBP4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 NDPQ00604 133 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 FOXI1Q12951 378 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 WFDC2Q14508 124 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 TMEM95Q3KNT9 176 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 SPANXN1Q5VSR9 72 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 CFAP126Q5VTH2 177 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 MAPKAPK5-AS1Q8N8E1 139 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 Q8TAT8 98 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 SCGB3A1Q96QR1 104 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 METTL26Q96S19 204 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 C1QTNF4Q9BXJ3 329 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 CDIP1Q9H305 208 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 ZNF702PQ9H963 129 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 MRPL16Q9NX20 251 aaKnown RBP4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 CYSLTR1Q9Y271 337 aa4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 TSSC4Q9Y5U2 329 aaPredicted RBP4.8□□□□□ -1.64
AC108488.1-202ENST00000439547 COL7A1Q02388 2944 aa4.79□□□□□ -1.64
AC108488.1-202ENST00000439547 TRAV8-2A0A0B4J237 113 aa4.79□□□□□ -1.64
AC108488.1-202ENST00000439547 FAM223BA6NKX1 122 aa4.79□□□□□ -1.64
AC108488.1-202ENST00000439547 H3BUA1 57 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms