RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 FAM213BQ8TBF2 198 aa13.55□□□□□ -0.24
NCKIPSD-206ENST00000439518 SFRP2Q96HF1 295 aa13.55□□□□□ -0.24
NCKIPSD-206ENST00000439518 PHLDA3Q9Y5J5 127 aa13.55□□□□□ -0.24
NCKIPSD-206ENST00000439518 A0A087WWC5 75 aa13.54□□□□□ -0.24
NCKIPSD-206ENST00000439518 TMSB15BA0A087X1C1 80 aa13.54□□□□□ -0.24
NCKIPSD-206ENST00000439518 A0A0D9SG52 128 aa13.54□□□□□ -0.24
NCKIPSD-206ENST00000439518 TPT1P13693 172 aaKnown RBP13.54□□□□□ -0.24
NCKIPSD-206ENST00000439518 NTN5Q8WTR8 489 aaPredicted RBP13.54□□□□□ -0.24
NCKIPSD-206ENST00000439518 A0A087WWL8 130 aa13.53□□□□□ -0.24
NCKIPSD-206ENST00000439518 EPM2AB3EWF7 344 aa13.53□□□□□ -0.24
NCKIPSD-206ENST00000439518 M0R381 172 aa13.53□□□□□ -0.24
NCKIPSD-206ENST00000439518 FAM74A4Q5TZK3 123 aa13.53□□□□□ -0.24
NCKIPSD-206ENST00000439518 Q8N814 137 aa13.53□□□□□ -0.24
NCKIPSD-206ENST00000439518 ZNF471Q9BX82 626 aaPredicted RBP13.53□□□□□ -0.24
NCKIPSD-206ENST00000439518 BCL2L11O43521 198 aa13.52□□□□□ -0.25
NCKIPSD-206ENST00000439518 S100A9P06702 114 aaKnown RBP13.52□□□□□ -0.25
NCKIPSD-206ENST00000439518 ZFP82Q8N141 532 aa13.52□□□□□ -0.25
NCKIPSD-206ENST00000439518 MLST8Q9BVC4 326 aa13.52□□□□□ -0.25
NCKIPSD-206ENST00000439518 IGLV5-52A0A0A0MRZ9 124 aa13.51□□□□□ -0.25
NCKIPSD-206ENST00000439518 A0A1B0GV50 99 aa13.51□□□□□ -0.25
NCKIPSD-206ENST00000439518 SCO2A0A1W2PP80 73 aa13.51□□□□□ -0.25
NCKIPSD-206ENST00000439518 DAZ4Q86SG3 579 aaKnown RBP13.51□□□□□ -0.25
NCKIPSD-206ENST00000439518 TM2D2Q9BX73 214 aa13.51□□□□□ -0.25
NCKIPSD-206ENST00000439518 DAZ3Q9NR90 486 aaKnown RBP13.51□□□□□ -0.25
NCKIPSD-206ENST00000439518 KANTRA0A1W2PQU2 76 aa13.5□□□□□ -0.25
NCKIPSD-206ENST00000439518 TRAV8-3A0A0A6YYJ7 113 aa13.49□□□□□ -0.25
NCKIPSD-206ENST00000439518 H2AFB1P0C5Y9 115 aa13.49□□□□□ -0.25
NCKIPSD-206ENST00000439518 FAT1Q14517 4588 aa13.48□□□□□ -0.25
NCKIPSD-206ENST00000439518 TRBV10-1A0A0K0K1A3 114 aa13.48□□□□□ -0.25
NCKIPSD-206ENST00000439518 PFDN1O60925 122 aa13.48□□□□□ -0.25
NCKIPSD-206ENST00000439518 CXCL1P09341 107 aa13.48□□□□□ -0.25
NCKIPSD-206ENST00000439518 EIF5AP63241 154 aaKnown RBP13.48□□□□□ -0.25
NCKIPSD-206ENST00000439518 BAGE2Q86Y30 109 aa13.48□□□□□ -0.25
NCKIPSD-206ENST00000439518 RPL19P84098 196 aaKnown RBP13.47□□□□□ -0.25
NCKIPSD-206ENST00000439518 WFDC2Q14508 124 aa13.47□□□□□ -0.25
NCKIPSD-206ENST00000439518 TOR2AQ5JU69 321 aa13.47□□□□□ -0.25
NCKIPSD-206ENST00000439518 NIT1Q86X76 327 aa13.47□□□□□ -0.25
NCKIPSD-206ENST00000439518 TMEM70Q9BUB7 260 aa13.47□□□□□ -0.25
NCKIPSD-206ENST00000439518 SRRM2Q9UQ35 2752 aaKnown RBP13.47□□□□□ -0.25
NCKIPSD-206ENST00000439518 TMUB2Q71RG4 321 aa13.46□□□□□ -0.25
NCKIPSD-206ENST00000439518 OR10AG1Q8NH19 301 aa13.46□□□□□ -0.25
NCKIPSD-206ENST00000439518 UBE2D3P61077 147 aa13.45□□□□□ -0.26
NCKIPSD-206ENST00000439518 UBE2D2P62837 147 aa13.45□□□□□ -0.26
NCKIPSD-206ENST00000439518 RPL36AP83881 106 aaKnown RBP13.45□□□□□ -0.26
NCKIPSD-206ENST00000439518 Q5VSD8 79 aa13.45□□□□□ -0.26
NCKIPSD-206ENST00000439518 RPL36ALQ969Q0 106 aaKnown RBP13.45□□□□□ -0.26
NCKIPSD-206ENST00000439518 SSBP4Q9BWG4 385 aaPredicted RBP13.45□□□□□ -0.26
NCKIPSD-206ENST00000439518 TRBV7-3A0A075B6L6 115 aa13.44□□□□□ -0.26
NCKIPSD-206ENST00000439518 SNAI2O43623 268 aa13.44□□□□□ -0.26
NCKIPSD-206ENST00000439518 CCL20P78556 96 aa13.44□□□□□ -0.26
NCKIPSD-206ENST00000439518 OR10G8Q8NGN5 311 aa13.44□□□□□ -0.26
NCKIPSD-206ENST00000439518 FRZBQ92765 325 aa13.44□□□□□ -0.26
NCKIPSD-206ENST00000439518 TRAV1-1A0A0B4J248 108 aa13.43□□□□□ -0.26
NCKIPSD-206ENST00000439518 SMR3BP02814 79 aaPredicted RBP13.43□□□□□ -0.26
NCKIPSD-206ENST00000439518 OR5AL1P0C617 328 aa13.43□□□□□ -0.26
NCKIPSD-206ENST00000439518 RPL35P42766 123 aaKnown RBP13.43□□□□□ -0.26
NCKIPSD-206ENST00000439518 RAB4BP61018 213 aa13.43□□□□□ -0.26
NCKIPSD-206ENST00000439518 PRR27Q6MZM9 219 aa13.43□□□□□ -0.26
NCKIPSD-206ENST00000439518 C11orf52Q96A22 123 aa13.43□□□□□ -0.26
NCKIPSD-206ENST00000439518 URGCP-MRPS24S4R325 110 aa13.43□□□□□ -0.26
NCKIPSD-206ENST00000439518 HAMPP81172 84 aa13.42□□□□□ -0.26
NCKIPSD-206ENST00000439518 CHCHD7Q9BUK0 85 aa13.42□□□□□ -0.26
NCKIPSD-206ENST00000439518 MANBALQ9NQG1 85 aa13.42□□□□□ -0.26
NCKIPSD-206ENST00000439518 COX11Q9Y6N1 276 aa13.42□□□□□ -0.26
NCKIPSD-206ENST00000439518 LECT2O14960 151 aa13.41□□□□□ -0.26
NCKIPSD-206ENST00000439518 C1QBP02746 253 aa13.41□□□□□ -0.26
NCKIPSD-206ENST00000439518 INAFM2P0DMQ5 153 aa13.41□□□□□ -0.26
NCKIPSD-206ENST00000439518 DNAJC30Q96LL9 226 aa13.41□□□□□ -0.26
NCKIPSD-206ENST00000439518 DERL1Q9BUN8 251 aa13.41□□□□□ -0.26
NCKIPSD-206ENST00000439518 FAM30AQ9NZY2 134 aa13.41□□□□□ -0.26
NCKIPSD-206ENST00000439518 GNG13Q9P2W3 67 aa13.41□□□□□ -0.26
NCKIPSD-206ENST00000439518 KLK12Q9UKR0 248 aa13.41□□□□□ -0.26
NCKIPSD-206ENST00000439518 DMBT1Q9UGM3 2413 aaPredicted RBP13.4□□□□□ -0.26
NCKIPSD-206ENST00000439518 RAB5CP51148 216 aa13.4□□□□□ -0.26
NCKIPSD-206ENST00000439518 ZNF56Q15929 161 aa13.4□□□□□ -0.26
NCKIPSD-206ENST00000439518 NEXN-AS1Q8NBZ9 246 aa13.4□□□□□ -0.26
NCKIPSD-206ENST00000439518 A0A087WX48 190 aa13.39□□□□□ -0.27
NCKIPSD-206ENST00000439518 MUC21A0A0G2JKD1 596 aa13.39□□□□□ -0.27
NCKIPSD-206ENST00000439518 MUC21A0A140T8X8 626 aa13.39□□□□□ -0.27
NCKIPSD-206ENST00000439518 SPANXN1Q5VSR9 72 aa13.39□□□□□ -0.27
NCKIPSD-206ENST00000439518 BAALCQ8WXS3 180 aa13.39□□□□□ -0.27
NCKIPSD-206ENST00000439518 RMI2Q96E14 147 aa13.39□□□□□ -0.27
NCKIPSD-206ENST00000439518 KIF25-AS1Q9Y6Z4 181 aa13.39□□□□□ -0.27
NCKIPSD-206ENST00000439518 TRBV6-8A0A0A6YYG3 113 aa13.38□□□□□ -0.27
NCKIPSD-206ENST00000439518 ELOBQ15370 118 aa13.38□□□□□ -0.27
NCKIPSD-206ENST00000439518 ATRAIDQ6UW56 229 aa13.38□□□□□ -0.27
NCKIPSD-206ENST00000439518 VPS13BQ7Z7G8 4022 aa13.38□□□□□ -0.27
NCKIPSD-206ENST00000439518 IGLV2-8P01709 118 aa13.37□□□□□ -0.27
NCKIPSD-206ENST00000439518 CENPWQ5EE01 88 aa13.37□□□□□ -0.27
NCKIPSD-206ENST00000439518 EIF5AL1Q6IS14 154 aaKnown RBP13.37□□□□□ -0.27
NCKIPSD-206ENST00000439518 Q6ZSA8 131 aa13.37□□□□□ -0.27
NCKIPSD-206ENST00000439518 UBE2WQ96B02 151 aa13.37□□□□□ -0.27
NCKIPSD-206ENST00000439518 FLG2Q5D862 2391 aaPredicted RBP13.37□□□□□ -0.27
NCKIPSD-206ENST00000439518 IGKV2D-24A0A075B6R9 120 aa13.36□□□□□ -0.27
NCKIPSD-206ENST00000439518 FAM229AH3BQW9 127 aa13.36□□□□□ -0.27
NCKIPSD-206ENST00000439518 SULT1A2P50226 295 aa13.36□□□□□ -0.27
NCKIPSD-206ENST00000439518 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.35□□□□□ -0.27
NCKIPSD-206ENST00000439518 SSTP61278 116 aa13.35□□□□□ -0.27
NCKIPSD-206ENST00000439518 C19orf71A6NCJ1 209 aa13.34□□□□□ -0.27
NCKIPSD-206ENST00000439518 F5H697 171 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms