RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 PLEKHB2Q96CS7 222 aa6.53□□□□□ -1.36
HPS4-206ENST00000439453 VCX2Q9H322 139 aa6.53□□□□□ -1.36
HPS4-206ENST00000439453 GAGE2DQ9UEU5 116 aa6.53□□□□□ -1.36
HPS4-206ENST00000439453 SS18L2Q9UHA2 77 aa6.53□□□□□ -1.36
HPS4-206ENST00000439453 RBAKDNA6NC62 111 aa6.53□□□□□ -1.36
HPS4-206ENST00000439453 CTSGP08311 255 aa6.53□□□□□ -1.36
HPS4-206ENST00000439453 EMP1P54849 157 aa6.53□□□□□ -1.36
HPS4-206ENST00000439453 NPBQ8NG41 125 aa6.53□□□□□ -1.36
HPS4-206ENST00000439453 ARHGAP32A7KAX9 2087 aa6.52□□□□□ -1.36
HPS4-206ENST00000439453 NOTCH3Q9UM47 2321 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 PRSS29PA6NIE9 313 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 ORMDL2Q53FV1 153 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 AGPAT4-IT1Q9H0P7 198 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 ONECUT1Q9UBC0 465 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 SLC25A16P16260 332 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 IGHV4-4A0A075B6R2 117 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 IGHV3-35A0A0C4DH35 117 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 TCL1BO95988 128 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 CD7P09564 240 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 PRTN3P24158 256 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 SLC50A1Q9BRV3 221 aa6.52□□□□□ -1.37
HPS4-206ENST00000439453 B5MCH6 92 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 ZNF688P0C7X2 276 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 DSCR9P59020 149 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 RPL11P62913 178 aaKnown RBP6.51□□□□□ -1.37
HPS4-206ENST00000439453 BAALCQ8WXS3 180 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 A8MWV9 139 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 SBSPONQ8IVN8 264 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 LY6G6DO95868 133 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 IGHV4-31P0DP07 118 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 NDPQ00604 133 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 ANXA2RQ3ZCQ2 193 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 NDUFA11Q86Y39 141 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 RASL10AQ92737 203 aa6.51□□□□□ -1.37
HPS4-206ENST00000439453 TMEM262E9PQX1 116 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 MGPP08493 103 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 LMO4P61968 165 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 Q6ZQT7 251 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 DPM3Q9P2X0 92 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 FN1P02751 2386 aaKnown RBP6.5□□□□□ -1.37
HPS4-206ENST00000439453 TRBV20-1A0A075B6N2 111 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 F5H697 171 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 SUMO2P61956 95 aaKnown RBP6.5□□□□□ -1.37
HPS4-206ENST00000439453 KLHL30-AS1Q8NEE0 82 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 PIMREGQ9BSJ6 248 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 C2orf66Q6UXQ4 117 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 ANKRD29Q8N6D5 301 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 KIR2DL4Q99706 377 aa6.5□□□□□ -1.37
HPS4-206ENST00000439453 GAGE5Q13069 117 aa6.49□□□□□ -1.37
HPS4-206ENST00000439453 GAGE6Q13070 117 aa6.49□□□□□ -1.37
HPS4-206ENST00000439453 IGHV3-66A0A0C4DH42 116 aa6.49□□□□□ -1.37
HPS4-206ENST00000439453 BUB3O43684 328 aa6.49□□□□□ -1.37
HPS4-206ENST00000439453 PRSS2P07478 247 aa6.49□□□□□ -1.37
HPS4-206ENST00000439453 RPL39LQ96EH5 51 aaKnown RBP6.49□□□□□ -1.37
HPS4-206ENST00000439453 TLN2Q9Y4G6 2542 aa6.49□□□□□ -1.37
HPS4-206ENST00000439453 A0A0J9YY99 117 aa6.48□□□□□ -1.37
HPS4-206ENST00000439453 ZNF256Q9Y2P7 627 aaPredicted RBP6.48□□□□□ -1.37
HPS4-206ENST00000439453 CFC1BP0CG36 223 aa6.48□□□□□ -1.37
HPS4-206ENST00000439453 CFC1P0CG37 223 aa6.48□□□□□ -1.37
HPS4-206ENST00000439453 CITED1Q99966 193 aa6.48□□□□□ -1.37
HPS4-206ENST00000439453 ANK2Q01484 3957 aa6.48□□□□□ -1.37
HPS4-206ENST00000439453 ZFAND3Q9H8U3 227 aa6.48□□□□□ -1.37
HPS4-206ENST00000439453 FBN1P35555 2871 aaKnown RBP6.48□□□□□ -1.37
HPS4-206ENST00000439453 IGHV3OR16-13A0A075B7E8 117 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 IGHV3-74A0A0B4J1X5 117 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 C1orf122Q6ZSJ8 110 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 C10orf126Q8N4M7 172 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 SMIM20Q8N5G0 67 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 C11orf86A6NJI1 115 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 M0R381 172 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 TMEM170BQ5T4T1 132 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 C9orf47Q6ZRZ4 202 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 DNHD1Q96M86 4753 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 SPRY2O43597 315 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 CRYGDP07320 174 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
HPS4-206ENST00000439453 NHLRC4P0CG21 123 aaPredicted RBP6.46□□□□□ -1.37
HPS4-206ENST00000439453 Q6ZS46 218 aa6.46□□□□□ -1.37
HPS4-206ENST00000439453 MRPL53Q96EL3 112 aaKnown RBP6.46□□□□□ -1.37
HPS4-206ENST00000439453 DPH3P1Q9H4G8 78 aa6.46□□□□□ -1.37
HPS4-206ENST00000439453 MTORP42345 2549 aa6.46□□□□□ -1.37
HPS4-206ENST00000439453 IGLV4-69A0A075B6H9 119 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 CLPSL1A2RUU4 121 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 DUSP14O95147 198 aaKnown RBP6.46□□□□□ -1.38
HPS4-206ENST00000439453 ZFP36P26651 326 aaKnown RBP6.46□□□□□ -1.38
HPS4-206ENST00000439453 PRR9Q5T870 116 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 C14orf178Q8N769 122 aaPredicted RBP6.46□□□□□ -1.38
HPS4-206ENST00000439453 LY6G5BQ8NDX9 201 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 AJUBAQ96IF1 538 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 PRO1854Q9UHT4 67 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 CENPVL3A0A0U1RRI6 287 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 SLC25A20O43772 301 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 COX6CP09669 75 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 SRD5A1P18405 259 aa6.46□□□□□ -1.38
HPS4-206ENST00000439453 IGHV3-49A0A0A0MS15 119 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 C15orf32Q32M92 178 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 SLC25A29Q8N8R3 303 aa6.45□□□□□ -1.38
HPS4-206ENST00000439453 SETD2Q9BYW2 2564 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms