RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 MT-ND6P03923 174 aa14.75□□□□□ -0.05
CHD3-204ENST00000439235 EVI2AP22794 236 aa14.75□□□□□ -0.05
CHD3-204ENST00000439235 DAD1P61803 113 aa14.75□□□□□ -0.05
CHD3-204ENST00000439235 C14orf178Q8N769 122 aaPredicted RBP14.75□□□□□ -0.05
CHD3-204ENST00000439235 OR4C5Q8NGB2 326 aa14.75□□□□□ -0.05
CHD3-204ENST00000439235 C18orf15Q96N68 181 aa14.75□□□□□ -0.05
CHD3-204ENST00000439235 GNB1LQ9BYB4 327 aa14.75□□□□□ -0.05
CHD3-204ENST00000439235 CELA1Q9UNI1 258 aa14.75□□□□□ -0.05
CHD3-204ENST00000439235 HLA-DQA1P01909 254 aa14.74□□□□□ -0.05
CHD3-204ENST00000439235 CFAP126Q5VTH2 177 aa14.74□□□□□ -0.05
CHD3-204ENST00000439235 TMEM136Q6ZRR5 245 aa14.74□□□□□ -0.05
CHD3-204ENST00000439235 JPT2Q9H910 190 aa14.74□□□□□ -0.05
CHD3-204ENST00000439235 A0A087WWL8 130 aa14.73□□□□□ -0.05
CHD3-204ENST00000439235 CIDEAO60543 219 aa14.73□□□□□ -0.05
CHD3-204ENST00000439235 FAM74A4Q5TZK3 123 aa14.73□□□□□ -0.05
CHD3-204ENST00000439235 MUC4Q99102 2169 aa14.73□□□□□ -0.05
CHD3-204ENST00000439235 CRYGDP07320 174 aa14.72□□□□□ -0.05
CHD3-204ENST00000439235 RAB5AP20339 215 aa14.72□□□□□ -0.05
CHD3-204ENST00000439235 ZFP2Q6ZN57 461 aa14.72□□□□□ -0.05
CHD3-204ENST00000439235 KIF25-AS1Q9Y6Z4 181 aa14.72□□□□□ -0.05
CHD3-204ENST00000439235 MGPP08493 103 aa14.71□□□□□ -0.05
CHD3-204ENST00000439235 FAM104BQ5XKR9 115 aa14.71□□□□□ -0.05
CHD3-204ENST00000439235 SAMD10Q9BYL1 202 aa14.71□□□□□ -0.05
CHD3-204ENST00000439235 ZNF56Q15929 161 aa14.7□□□□□ -0.06
CHD3-204ENST00000439235 AMN1Q8IY45 258 aa14.7□□□□□ -0.06
CHD3-204ENST00000439235 POM121L12Q8N7R1 296 aa14.7□□□□□ -0.06
CHD3-204ENST00000439235 C11orf45Q8TAV5 145 aa14.7□□□□□ -0.06
CHD3-204ENST00000439235 IGHV3-53P01767 116 aa14.69□□□□□ -0.06
CHD3-204ENST00000439235 RPS10P46783 165 aaKnown RBP14.69□□□□□ -0.06
CHD3-204ENST00000439235 UFSP1Q6NVU6 142 aa14.69□□□□□ -0.06
CHD3-204ENST00000439235 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.69□□□□□ -0.06
CHD3-204ENST00000439235 FRZBQ92765 325 aa14.69□□□□□ -0.06
CHD3-204ENST00000439235 ZNF479Q96JC4 524 aa14.69□□□□□ -0.06
CHD3-204ENST00000439235 TRAPPC1Q9Y5R8 145 aa14.69□□□□□ -0.06
CHD3-204ENST00000439235 U3KQK5 164 aa14.69□□□□□ -0.06
CHD3-204ENST00000439235 APCSP02743 223 aa14.68□□□□□ -0.06
CHD3-204ENST00000439235 ATP5G1P05496 136 aa14.68□□□□□ -0.06
CHD3-204ENST00000439235 RNF185Q96GF1 192 aa14.68□□□□□ -0.06
CHD3-204ENST00000439235 MRPL18Q9H0U6 180 aaKnown RBP14.68□□□□□ -0.06
CHD3-204ENST00000439235 IGHV3-73A0A0B4J1V6 119 aa14.67□□□□□ -0.06
CHD3-204ENST00000439235 F5H697 171 aa14.67□□□□□ -0.06
CHD3-204ENST00000439235 RAB4AP20338 218 aa14.67□□□□□ -0.06
CHD3-204ENST00000439235 LINC00315P59091 139 aa14.67□□□□□ -0.06
CHD3-204ENST00000439235 C12orf74Q32Q52 190 aa14.67□□□□□ -0.06
CHD3-204ENST00000439235 MRAP2Q96G30 205 aa14.67□□□□□ -0.06
CHD3-204ENST00000439235 TRGV4A0A0C4DH28 118 aa14.66□□□□□ -0.06
CHD3-204ENST00000439235 SLAQ13239 276 aa14.66□□□□□ -0.06
CHD3-204ENST00000439235 FABP9Q0Z7S8 132 aa14.65□□□□□ -0.06
CHD3-204ENST00000439235 MRPL51Q4U2R6 128 aaKnown RBP14.65□□□□□ -0.06
CHD3-204ENST00000439235 H7C1H1 209 aa14.64□□□□□ -0.07
CHD3-204ENST00000439235 PPBPP02775 128 aa14.64□□□□□ -0.07
CHD3-204ENST00000439235 SUMO4Q6EEV6 95 aa14.64□□□□□ -0.07
CHD3-204ENST00000439235 NBEAL2Q6ZNJ1 2754 aa14.63□□□□□ -0.07
CHD3-204ENST00000439235 GATA1P15976 413 aaPredicted RBP14.63□□□□□ -0.07
CHD3-204ENST00000439235 NANOS2P60321 138 aaKnown RBP14.63□□□□□ -0.07
CHD3-204ENST00000439235 FHL2Q14192 279 aa14.63□□□□□ -0.07
CHD3-204ENST00000439235 Q6ZTC4 211 aa14.63□□□□□ -0.07
CHD3-204ENST00000439235 HTN3P15516 51 aa14.62□□□□□ -0.07
CHD3-204ENST00000439235 CKS2P33552 79 aa14.62□□□□□ -0.07
CHD3-204ENST00000439235 ORMDL3Q8N138 153 aa14.62□□□□□ -0.07
CHD3-204ENST00000439235 EDA2RQ9HAV5 297 aa14.62□□□□□ -0.07
CHD3-204ENST00000439235 TRAV26-2A0A0B4J265 109 aa14.61□□□□□ -0.07
CHD3-204ENST00000439235 D6R8Y8 96 aa14.61□□□□□ -0.07
CHD3-204ENST00000439235 F5H768 121 aa14.61□□□□□ -0.07
CHD3-204ENST00000439235 TRGC2P03986 189 aa14.61□□□□□ -0.07
CHD3-204ENST00000439235 TRBV6-4A0A1B0GX49 114 aa14.6□□□□□ -0.07
CHD3-204ENST00000439235 K7EQD1 137 aa14.6□□□□□ -0.07
CHD3-204ENST00000439235 NCR2O95944 276 aa14.6□□□□□ -0.07
CHD3-204ENST00000439235 PPP1R17O96001 155 aa14.6□□□□□ -0.07
CHD3-204ENST00000439235 HOXA5P20719 270 aa14.6□□□□□ -0.07
CHD3-204ENST00000439235 RHOHQ15669 191 aa14.6□□□□□ -0.07
CHD3-204ENST00000439235 KIAA1644Q3SXP7 199 aa14.6□□□□□ -0.07
CHD3-204ENST00000439235 PRO0255Q9UI72 69 aa14.6□□□□□ -0.07
CHD3-204ENST00000439235 SMKR1H3BMG3 65 aa14.59□□□□□ -0.07
CHD3-204ENST00000439235 M0QY20 66 aa14.59□□□□□ -0.07
CHD3-204ENST00000439235 PRADC1Q9BSG0 188 aa14.59□□□□□ -0.07
CHD3-204ENST00000439235 HHLA3Q9XRX5 114 aa14.59□□□□□ -0.07
CHD3-204ENST00000439235 LAMTOR2Q9Y2Q5 125 aa14.59□□□□□ -0.07
CHD3-204ENST00000439235 TRAV10A0A0B4J240 114 aa14.58□□□□□ -0.08
CHD3-204ENST00000439235 TRBV10-1A0A0K0K1A3 114 aa14.58□□□□□ -0.08
CHD3-204ENST00000439235 Q6ZSN1 163 aa14.58□□□□□ -0.08
CHD3-204ENST00000439235 SLC25A29Q8N8R3 303 aa14.58□□□□□ -0.08
CHD3-204ENST00000439235 PRELID3AQ96N28 172 aa14.58□□□□□ -0.08
CHD3-204ENST00000439235 HUWE1Q7Z6Z7 4374 aaKnown RBP14.57□□□□□ -0.08
CHD3-204ENST00000439235 CRYBA4P53673 196 aa14.57□□□□□ -0.08
CHD3-204ENST00000439235 OR10J3Q5JRS4 329 aa14.57□□□□□ -0.08
CHD3-204ENST00000439235 DNAH9Q9NYC9 4486 aa14.57□□□□□ -0.08
CHD3-204ENST00000439235 DEFB131BA0A096LNP1 70 aa14.56□□□□□ -0.08
CHD3-204ENST00000439235 PHOX2AO14813 284 aa14.56□□□□□ -0.08
CHD3-204ENST00000439235 SRIP30626 198 aa14.56□□□□□ -0.08
CHD3-204ENST00000439235 ALKBH7Q9BT30 221 aaPredicted RBP14.56□□□□□ -0.08
CHD3-204ENST00000439235 NIT2Q9NQR4 276 aa14.56□□□□□ -0.08
CHD3-204ENST00000439235 PRKDCP78527 4128 aaKnown RBP14.56□□□□□ -0.08
CHD3-204ENST00000439235 NACAE9PAV3 2078 aa14.55□□□□□ -0.08
CHD3-204ENST00000439235 C1orf196B1AJZ1 125 aa14.55□□□□□ -0.08
CHD3-204ENST00000439235 PAX4O43316 350 aa14.55□□□□□ -0.08
CHD3-204ENST00000439235 NRACQ8N912 160 aa14.55□□□□□ -0.08
CHD3-204ENST00000439235 RPL39LQ96EH5 51 aaKnown RBP14.55□□□□□ -0.08
CHD3-204ENST00000439235 DNAJC30Q96LL9 226 aa14.55□□□□□ -0.08
CHD3-204ENST00000439235 TENM3Q9P273 2699 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms