RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 A0A0J9YX75 114 aa9.23□□□□□ -0.93
NEK1-201ENST00000439128 NCOR2Q9Y618 2525 aa9.23□□□□□ -0.93
NEK1-201ENST00000439128 TNRC6AQ8NDV7 1962 aaKnown RBP9.23□□□□□ -0.93
NEK1-201ENST00000439128 IGF1P05019 195 aa9.23□□□□□ -0.93
NEK1-201ENST00000439128 RPL39LQ96EH5 51 aaKnown RBP9.23□□□□□ -0.93
NEK1-201ENST00000439128 ZNF702PQ9H963 129 aa9.23□□□□□ -0.93
NEK1-201ENST00000439128 DENND4AQ7Z401 1863 aa9.23□□□□□ -0.93
NEK1-201ENST00000439128 PLXNB3Q9ULL4 1909 aa9.23□□□□□ -0.93
NEK1-201ENST00000439128 Q6ZSR3 168 aa9.23□□□□□ -0.93
NEK1-201ENST00000439128 MBD6Q96DN6 1003 aa9.23□□□□□ -0.93
NEK1-201ENST00000439128 A8MWP6 167 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 GAGE2AQ6NT46 116 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 Q0VG73 95 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 V9GYV3 84 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 PIEZO1Q92508 2521 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 LGALS9O00182 355 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 SPANXA1Q9NS26 97 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 A0A087X0K7 114 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 TRAV10A0A0B4J240 114 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 SMIM27A0A1W2PRY6 76 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 Q9H8V8 135 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 CACNA1AO00555 2505 aa9.22□□□□□ -0.93
NEK1-201ENST00000439128 CSPG4Q6UVK1 2322 aa9.21□□□□□ -0.93
NEK1-201ENST00000439128 SMIM9A6NGZ8 99 aa9.21□□□□□ -0.93
NEK1-201ENST00000439128 LYRM9A8MSI8 78 aa9.21□□□□□ -0.93
NEK1-201ENST00000439128 HIST1H2BLQ99880 126 aa9.21□□□□□ -0.93
NEK1-201ENST00000439128 DYSFO75923 2080 aa9.21□□□□□ -0.94
NEK1-201ENST00000439128 C9orf47Q6ZRZ4 202 aa9.21□□□□□ -0.94
NEK1-201ENST00000439128 LINC00518Q8N0U6 118 aa9.21□□□□□ -0.94
NEK1-201ENST00000439128 PATE2Q6UY27 113 aa9.21□□□□□ -0.94
NEK1-201ENST00000439128 MORN5Q5VZ52 161 aa9.2□□□□□ -0.94
NEK1-201ENST00000439128 PSMG3-AS1Q96PY0 264 aa9.2□□□□□ -0.94
NEK1-201ENST00000439128 GATA1P15976 413 aaPredicted RBP9.2□□□□□ -0.94
NEK1-201ENST00000439128 C18orf32Q8TCD1 76 aa9.2□□□□□ -0.94
NEK1-201ENST00000439128 OBSL1O75147 1896 aa9.2□□□□□ -0.94
NEK1-201ENST00000439128 TRAV13-2A0A0B4J235 113 aa9.2□□□□□ -0.94
NEK1-201ENST00000439128 BBC3Q96PG8 261 aaPredicted RBP9.2□□□□□ -0.94
NEK1-201ENST00000439128 PLCE1Q9P212 2302 aa9.2□□□□□ -0.94
NEK1-201ENST00000439128 MIFP14174 115 aa9.2□□□□□ -0.94
NEK1-201ENST00000439128 ZNF124Q15973 351 aa9.2□□□□□ -0.94
NEK1-201ENST00000439128 HIGD2BQ4VC39 106 aa9.19□□□□□ -0.94
NEK1-201ENST00000439128 MRPL35Q9NZE8 188 aaKnown RBP9.19□□□□□ -0.94
NEK1-201ENST00000439128 MDFICQ9P1T7 246 aa9.19□□□□□ -0.94
NEK1-201ENST00000439128 DSCAMO60469 2012 aa9.19□□□□□ -0.94
NEK1-201ENST00000439128 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.19□□□□□ -0.94
NEK1-201ENST00000439128 A0A1B0GV90 55 aa9.19□□□□□ -0.94
NEK1-201ENST00000439128 FGF6P10767 208 aa9.19□□□□□ -0.94
NEK1-201ENST00000439128 SPAG11BQ08648 103 aa9.19□□□□□ -0.94
NEK1-201ENST00000439128 Q6ZTI0 123 aa9.19□□□□□ -0.94
NEK1-201ENST00000439128 DSCR8Q96T75 97 aa9.19□□□□□ -0.94
NEK1-201ENST00000439128 EML6Q6ZMW3 1958 aa9.19□□□□□ -0.94
NEK1-201ENST00000439128 GAGE12HA6NDE8 117 aa9.18□□□□□ -0.94
NEK1-201ENST00000439128 C18orf65Q6ZTR6 163 aa9.18□□□□□ -0.94
NEK1-201ENST00000439128 J3QQQ9 107 aa9.18□□□□□ -0.94
NEK1-201ENST00000439128 SOCS3O14543 225 aa9.18□□□□□ -0.94
NEK1-201ENST00000439128 SONP18583 2426 aaKnown RBP9.18□□□□□ -0.94
NEK1-201ENST00000439128 hADV29S1A0JD25 119 aa9.18□□□□□ -0.94
NEK1-201ENST00000439128 FSTL3O95633 263 aa9.18□□□□□ -0.94
NEK1-201ENST00000439128 UTF1Q5T230 341 aa9.18□□□□□ -0.94
NEK1-201ENST00000439128 C9orf153Q5TBE3 101 aa9.18□□□□□ -0.94
NEK1-201ENST00000439128 COX11Q9Y6N1 276 aa9.18□□□□□ -0.94
NEK1-201ENST00000439128 HIST3H2BBQ8N257 126 aa9.17□□□□□ -0.94
NEK1-201ENST00000439128 COX7B2Q8TF08 81 aa9.17□□□□□ -0.94
NEK1-201ENST00000439128 CEP192Q8TEP8 1941 aa9.17□□□□□ -0.94
NEK1-201ENST00000439128 C11orf52Q96A22 123 aa9.16□□□□□ -0.94
NEK1-201ENST00000439128 CCL25O15444 150 aa9.16□□□□□ -0.94
NEK1-201ENST00000439128 IGHV4-28A0A0C4DH34 117 aa9.16□□□□□ -0.94
NEK1-201ENST00000439128 F8VRH5 84 aa9.16□□□□□ -0.94
NEK1-201ENST00000439128 NCR3O14931 201 aa9.16□□□□□ -0.94
NEK1-201ENST00000439128 COLCA2A8K830 154 aa9.16□□□□□ -0.94
NEK1-201ENST00000439128 C9JAW5 83 aa9.16□□□□□ -0.94
NEK1-201ENST00000439128 HERV-K104P63124 156 aa9.16□□□□□ -0.94
NEK1-201ENST00000439128 MSRB1Q9NZV6 116 aa9.16□□□□□ -0.94
NEK1-201ENST00000439128 K7EN84 100 aa9.15□□□□□ -0.94
NEK1-201ENST00000439128 ZFP2Q6ZN57 461 aa9.15□□□□□ -0.95
NEK1-201ENST00000439128 NDUFA7O95182 113 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 ZNF664Q8N3J9 261 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 HIVEP3Q5T1R4 2406 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 WFDC10AQ9H1F0 79 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 ANKHD1Q8IWZ3 2542 aaKnown RBP9.14□□□□□ -0.95
NEK1-201ENST00000439128 TP53TG3Q9ULZ0 132 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 PRRC2AP48634 2157 aaKnown RBP9.14□□□□□ -0.95
NEK1-201ENST00000439128 A0A0J9YWU9 116 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 K7EQG2 157 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 HAMPP81172 84 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
NEK1-201ENST00000439128 AVPP01185 164 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 INAFM2P0DMQ5 153 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 C7orf33Q8WU49 177 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 A0A087WZ39 114 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 SIVA1O15304 175 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 KMT2EQ8IZD2 1858 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 IGLV2-14P01704 120 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 PSMB8P28062 276 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 KIR3DS1Q14943 382 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 LYPD6BQ8NI32 183 aa9.13□□□□□ -0.95
NEK1-201ENST00000439128 SHANK1Q9Y566 2161 aa9.12□□□□□ -0.95
NEK1-201ENST00000439128 NFE4Q86UQ8 179 aa9.12□□□□□ -0.95
NEK1-201ENST00000439128 GTSF1LQ9H1H1 148 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms