RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RBAKDNA6NC62 111 aa8.88□□□□□ -0.99
TRAPPC9-202ENST00000438773 INSP01308 110 aa8.88□□□□□ -0.99
TRAPPC9-202ENST00000438773 MRPL35Q9NZE8 188 aaKnown RBP8.88□□□□□ -0.99
TRAPPC9-202ENST00000438773 TSPAN13O95857 204 aa8.88□□□□□ -0.99
TRAPPC9-202ENST00000438773 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
TRAPPC9-202ENST00000438773 COX8AP10176 69 aa8.87□□□□□ -0.99
TRAPPC9-202ENST00000438773 ZZEF1O43149 2961 aa8.87□□□□□ -0.99
TRAPPC9-202ENST00000438773 TRGV1A0A0A0MS02 117 aa8.87□□□□□ -0.99
TRAPPC9-202ENST00000438773 KRTAP10-9P60411 292 aa8.87□□□□□ -0.99
TRAPPC9-202ENST00000438773 GTSF1Q8WW33 167 aa8.87□□□□□ -0.99
TRAPPC9-202ENST00000438773 AKAP13Q12802 2813 aa8.87□□□□□ -0.99
TRAPPC9-202ENST00000438773 CCL24O00175 119 aa8.87□□□□□ -0.99
TRAPPC9-202ENST00000438773 OR13C6PQ8NH95 151 aa8.87□□□□□ -0.99
TRAPPC9-202ENST00000438773 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 TEX48A0A1B0GUV7 120 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 C9orf118A6NHY6 69 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 INAFM1C9JVW0 142 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 AVPP01185 164 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 GPHB5Q86YW7 130 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 ZNF625Q96I27 306 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 CSTL1Q9H114 145 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 SPINK8P0C7L1 97 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 WIPF2Q8TF74 440 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 ZNF747Q9BV97 191 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 LINC01549A6NIU2 74 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 IGHG4P01861 327 aa8.86□□□□□ -0.99
TRAPPC9-202ENST00000438773 AZU1P20160 251 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 COL27A1Q8IZC6 1860 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 TRGV4A0A0C4DH28 118 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 A8MWV9 139 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 K7EMT4 169 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 TAX1BP3O14907 124 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 GNRH2O43555 120 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 HTN3P15516 51 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 KLF5Q13887 457 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 C19orf54Q5BKX5 351 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 IGHV3-53P01767 116 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 VCX2Q9H322 139 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 SCGB1A1P11684 91 aa8.85□□□□□ -0.99
TRAPPC9-202ENST00000438773 SVEP1Q4LDE5 3571 aa8.84□□□□□ -0.99
TRAPPC9-202ENST00000438773 VCYO14598 125 aa8.84□□□□□ -0.99
TRAPPC9-202ENST00000438773 Q6YL49 198 aa8.84□□□□□ -0.99
TRAPPC9-202ENST00000438773 DEFB125Q8N687 156 aa8.84□□□□□ -0.99
TRAPPC9-202ENST00000438773 C1QTNF4Q9BXJ3 329 aa8.84□□□□□ -0.99
TRAPPC9-202ENST00000438773 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
TRAPPC9-202ENST00000438773 TMEM89A2RUT3 159 aa8.84□□□□□ -0.99
TRAPPC9-202ENST00000438773 C10orf99Q6UWK7 81 aa8.84□□□□□ -0.99
TRAPPC9-202ENST00000438773 C19orf71A6NCJ1 209 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 C9JAW5 83 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 Q6ZS46 218 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 TMEM262E9PQX1 116 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 MLST8Q9BVC4 326 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 A0A1W2PPM0 123 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 ADARB2-AS1A8MUL3 147 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 H3BRM9 83 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 FOXI2Q6ZQN5 318 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 HELZ2Q9BYK8 2649 aaKnown RBP8.83□□□□□ -1
TRAPPC9-202ENST00000438773 SPXQ9BT56 116 aa8.83□□□□□ -1
TRAPPC9-202ENST00000438773 DNAJC9-AS1A6NH13 148 aa8.82□□□□□ -1
TRAPPC9-202ENST00000438773 TMEM238C9JI98 176 aa8.82□□□□□ -1
TRAPPC9-202ENST00000438773 WFDC2Q14508 124 aa8.82□□□□□ -1
TRAPPC9-202ENST00000438773 C9orf47Q6ZRZ4 202 aa8.82□□□□□ -1
TRAPPC9-202ENST00000438773 K7EP34 96 aa8.82□□□□□ -1
TRAPPC9-202ENST00000438773 HLA-DRB4P13762 266 aa8.82□□□□□ -1
TRAPPC9-202ENST00000438773 HLA-DRB4X5D2U9 266 aa8.82□□□□□ -1
TRAPPC9-202ENST00000438773 FXYD2P54710 66 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 GAGE2BQ13066 116 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 GAGE2EQ4V326 116 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 APRG1Q8IVJ8 170 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 C10orf126Q8N4M7 172 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 GAGE2DQ9UEU5 116 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 LY6G6DO95868 133 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 TRBV6-1A0A0K0K1D8 114 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 LINC01559Q495D7 138 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 ERG28Q9UKR5 140 aa8.81□□□□□ -1
TRAPPC9-202ENST00000438773 CD28P10747 220 aa8.8□□□□□ -1
TRAPPC9-202ENST00000438773 MYCNOSP40205 109 aa8.8□□□□□ -1
TRAPPC9-202ENST00000438773 RNASE13Q5GAN3 156 aaKnown RBP8.8□□□□□ -1
TRAPPC9-202ENST00000438773 TMEM101Q96IK0 257 aa8.8□□□□□ -1
TRAPPC9-202ENST00000438773 GAGE12HA6NDE8 117 aa8.8□□□□□ -1
TRAPPC9-202ENST00000438773 ZNF80P51504 273 aaPredicted RBP8.8□□□□□ -1
TRAPPC9-202ENST00000438773 DLX4Q92988 240 aaPredicted RBP8.8□□□□□ -1
TRAPPC9-202ENST00000438773 SPAG8Q99932 426 aaPredicted RBP8.8□□□□□ -1
TRAPPC9-202ENST00000438773 RPL36AP83881 106 aaKnown RBP8.8□□□□□ -1
TRAPPC9-202ENST00000438773 TMEM61Q8N0U2 210 aa8.8□□□□□ -1
TRAPPC9-202ENST00000438773 RPL36ALQ969Q0 106 aaKnown RBP8.8□□□□□ -1
TRAPPC9-202ENST00000438773 C2orf66Q6UXQ4 117 aa8.8□□□□□ -1
TRAPPC9-202ENST00000438773 Q8N8P6 123 aa8.8□□□□□ -1
TRAPPC9-202ENST00000438773 SCRT2Q9NQ03 307 aa8.8□□□□□ -1
TRAPPC9-202ENST00000438773 IGHV3-16A0A0C4DH30 117 aa8.79□□□□□ -1
TRAPPC9-202ENST00000438773 PHLDA1Q8WV24 401 aaPredicted RBP8.79□□□□□ -1
TRAPPC9-202ENST00000438773 SDHAF1A6NFY7 115 aa8.79□□□□□ -1
TRAPPC9-202ENST00000438773 CIRBPQ14011 172 aaKnown RBP8.79□□□□□ -1
TRAPPC9-202ENST00000438773 TMEM86BQ8N661 226 aa8.79□□□□□ -1
TRAPPC9-202ENST00000438773 CITED2Q99967 270 aaPredicted RBP8.79□□□□□ -1
TRAPPC9-202ENST00000438773 SMAD5-AS1Q9Y6J3 95 aa8.79□□□□□ -1
TRAPPC9-202ENST00000438773 DEFB130BP0DP73 79 aa8.79□□□□□ -1
TRAPPC9-202ENST00000438773 DEFB130AP0DP74 79 aa8.79□□□□□ -1
TRAPPC9-202ENST00000438773 PRADC1Q9BSG0 188 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms