RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 LENEPQ9Y5L5 61 aa10.42□□□□□ -0.74
PTCHD3-201ENST00000438700 S100A4P26447 101 aaKnown RBP10.42□□□□□ -0.74
PTCHD3-201ENST00000438700 TRAV21A0A0B4J279 112 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 FCER1GP30273 86 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 CEND1Q8N111 149 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 MRPL35Q9NZE8 188 aaKnown RBP10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 SMPXQ9UHP9 88 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 LGALS1P09382 135 aaKnown RBP10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 INSL3P51460 131 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 ANXA2RQ3ZCQ2 193 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 ETDBQ3ZM63 59 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 RNF152Q8N8N0 203 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 SMR3AQ99954 134 aa10.41□□□□□ -0.74
PTCHD3-201ENST00000438700 CIDEAO60543 219 aa10.4□□□□□ -0.74
PTCHD3-201ENST00000438700 NRACQ8N912 160 aa10.4□□□□□ -0.74
PTCHD3-201ENST00000438700 UBE2E2Q96LR5 201 aa10.4□□□□□ -0.74
PTCHD3-201ENST00000438700 CHTOPQ9Y3Y2 248 aaKnown RBP10.4□□□□□ -0.74
PTCHD3-201ENST00000438700 ANK3Q12955 4377 aaKnown RBP10.4□□□□□ -0.74
PTCHD3-201ENST00000438700 IGLL5B9A064 214 aa10.4□□□□□ -0.75
PTCHD3-201ENST00000438700 Q6ZSV7 163 aa10.4□□□□□ -0.75
PTCHD3-201ENST00000438700 GNRH2O43555 120 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 SPANXB1Q9NS25 103 aaPredicted RBP10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 HIGD1BQ9P298 99 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 CUBNO60494 3623 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 NF1P21359 2839 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 IGLV2-18A0A075B6J9 118 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 IGHV4-4A0A075B6R2 117 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 IGHV4OR15-8A0A075B7B6 117 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 A0A087WW49 117 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 ASIPP42127 132 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 Q8N8P6 123 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
PTCHD3-201ENST00000438700 GAGE12HA6NDE8 117 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 LINC01546A6NGU7 62 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 E9PLD3 99 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 K7EMT4 169 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 FAM19A4Q96LR4 140 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 SIGMAR1Q99720 223 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 SPAG8Q99932 426 aaPredicted RBP10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 TM2D2Q9BX73 214 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 DPM2O94777 84 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 FOXI2Q6ZQN5 318 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 C18orf65Q6ZTR6 163 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 DCANP1Q8TF63 244 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 ZNF479Q96JC4 524 aa10.38□□□□□ -0.75
PTCHD3-201ENST00000438700 MUC4Q99102 2169 aa10.37□□□□□ -0.75
PTCHD3-201ENST00000438700 OTOGQ6ZRI0 2925 aa10.37□□□□□ -0.75
PTCHD3-201ENST00000438700 ZNF688P0C7X2 276 aa10.37□□□□□ -0.75
PTCHD3-201ENST00000438700 SYNJ2BPP57105 145 aa10.37□□□□□ -0.75
PTCHD3-201ENST00000438700 DEFB136Q30KP8 78 aa10.37□□□□□ -0.75
PTCHD3-201ENST00000438700 C12orf74Q32Q52 190 aa10.37□□□□□ -0.75
PTCHD3-201ENST00000438700 TCTEX1D4Q5JR98 221 aa10.37□□□□□ -0.75
PTCHD3-201ENST00000438700 HIVEP2P31629 2446 aa10.36□□□□□ -0.75
PTCHD3-201ENST00000438700 MGPP08493 103 aa10.36□□□□□ -0.75
PTCHD3-201ENST00000438700 HOXD3P31249 432 aaPredicted RBP10.36□□□□□ -0.75
PTCHD3-201ENST00000438700 KHDC1LQ5JSQ8 128 aa10.36□□□□□ -0.75
PTCHD3-201ENST00000438700 IGKV3-20P01619 116 aa10.36□□□□□ -0.75
PTCHD3-201ENST00000438700 CD300EQ496F6 205 aaPredicted RBP10.36□□□□□ -0.75
PTCHD3-201ENST00000438700 HIST2H2BDQ6DRA6 164 aa10.36□□□□□ -0.75
PTCHD3-201ENST00000438700 RNASE3P12724 160 aaKnown RBP10.35□□□□□ -0.75
PTCHD3-201ENST00000438700 ID1P41134 155 aa10.35□□□□□ -0.75
PTCHD3-201ENST00000438700 LAGE3Q14657 143 aa10.35□□□□□ -0.75
PTCHD3-201ENST00000438700 PSMG4Q5JS54 123 aa10.35□□□□□ -0.75
PTCHD3-201ENST00000438700 SFTA2Q6UW10 78 aa10.35□□□□□ -0.75
PTCHD3-201ENST00000438700 RPL39LQ96EH5 51 aaKnown RBP10.35□□□□□ -0.75
PTCHD3-201ENST00000438700 SCGB2A2Q13296 93 aa10.35□□□□□ -0.75
PTCHD3-201ENST00000438700 HIST1H4GQ99525 98 aa10.35□□□□□ -0.75
PTCHD3-201ENST00000438700 LY6G6DO95868 133 aa10.34□□□□□ -0.75
PTCHD3-201ENST00000438700 MRAP2Q96G30 205 aa10.34□□□□□ -0.75
PTCHD3-201ENST00000438700 TRAV12-3A0A0B4J271 114 aa10.34□□□□□ -0.75
PTCHD3-201ENST00000438700 RNASE1P07998 156 aaKnown RBP10.34□□□□□ -0.75
PTCHD3-201ENST00000438700 APRG1Q8IVJ8 170 aa10.34□□□□□ -0.75
PTCHD3-201ENST00000438700 RASL10AQ92737 203 aa10.34□□□□□ -0.75
PTCHD3-201ENST00000438700 CLUHP3Q96NS8 147 aa10.34□□□□□ -0.75
PTCHD3-201ENST00000438700 DPH3P1Q9H4G8 78 aa10.34□□□□□ -0.75
PTCHD3-201ENST00000438700 KLLNB2CW77 178 aa10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 F8W1H4 67 aa10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 LGALS9O00182 355 aa10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 SLURP1P55000 103 aa10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 SMIM2Q9BVW6 85 aa10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 FLNBO75369 2602 aaKnown RBP10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 TRAV12-2A0A075B6T6 113 aa10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 FAM159AQ6UWV7 190 aa10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 ZNF418Q8TF45 676 aaPredicted RBP10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 C4orf3Q8WVX3 66 aa10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 DUX3Q96PT4 197 aa10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 SETD2Q9BYW2 2564 aaPredicted RBP10.33□□□□□ -0.76
PTCHD3-201ENST00000438700 ATP5LO75964 103 aa10.32□□□□□ -0.76
PTCHD3-201ENST00000438700 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
PTCHD3-201ENST00000438700 CYSLTR1Q9Y271 337 aa10.32□□□□□ -0.76
PTCHD3-201ENST00000438700 PRSS47A8MTI9 375 aa10.32□□□□□ -0.76
PTCHD3-201ENST00000438700 KLHL30-AS1Q8NEE0 82 aa10.32□□□□□ -0.76
PTCHD3-201ENST00000438700 OR11H1Q8NG94 326 aa10.32□□□□□ -0.76
PTCHD3-201ENST00000438700 DEFB104AQ8WTQ1 72 aa10.32□□□□□ -0.76
PTCHD3-201ENST00000438700 C20orf78Q9BR46 151 aa10.32□□□□□ -0.76
PTCHD3-201ENST00000438700 PRO0461Q9UI25 63 aa10.32□□□□□ -0.76
PTCHD3-201ENST00000438700 TRBV7-9A0A0J9YWB2 115 aa10.31□□□□□ -0.76
PTCHD3-201ENST00000438700 CD7P09564 240 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms