RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 INSP01308 110 aa7.91□□□□□ -1.14
HMGCL-204ENST00000436439 MED14OSP0DP75 135 aa7.91□□□□□ -1.14
HMGCL-204ENST00000436439 RPL35AP18077 110 aaKnown RBP7.91□□□□□ -1.14
HMGCL-204ENST00000436439 PMCHP20382 165 aa7.91□□□□□ -1.14
HMGCL-204ENST00000436439 APOC4P55056 127 aa7.91□□□□□ -1.14
HMGCL-204ENST00000436439 ANXA2RQ3ZCQ2 193 aa7.91□□□□□ -1.14
HMGCL-204ENST00000436439 FAM159AQ6UWV7 190 aa7.91□□□□□ -1.14
HMGCL-204ENST00000436439 RNF183Q96D59 192 aa7.91□□□□□ -1.14
HMGCL-204ENST00000436439 SNAI2O43623 268 aa7.9□□□□□ -1.14
HMGCL-204ENST00000436439 GIG44P09565 113 aaPredicted RBP7.9□□□□□ -1.14
HMGCL-204ENST00000436439 OR5AL1P0C617 328 aa7.9□□□□□ -1.14
HMGCL-204ENST00000436439 RBMY1A1P0DJD3 496 aaKnown RBP7.9□□□□□ -1.14
HMGCL-204ENST00000436439 RBMY1CP0DJD4 496 aa7.9□□□□□ -1.14
HMGCL-204ENST00000436439 FXYD7P58549 80 aa7.9□□□□□ -1.14
HMGCL-204ENST00000436439 RBMY1FQ15415 496 aaKnown RBP7.9□□□□□ -1.14
HMGCL-204ENST00000436439 FAM104BQ5XKR9 115 aa7.9□□□□□ -1.14
HMGCL-204ENST00000436439 RNASEKQ6P5S7 137 aaKnown RBP7.9□□□□□ -1.14
HMGCL-204ENST00000436439 CEMP1Q6PRD7 247 aaPredicted RBP7.9□□□□□ -1.14
HMGCL-204ENST00000436439 NIT1Q86X76 327 aa7.9□□□□□ -1.14
HMGCL-204ENST00000436439 IGHV1OR15-1A0A075B7D0 117 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 KIR2DL5BA0A0G2JN68 375 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 KIR2DL5BA0A0G2JPC4 375 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 NUPR2A6NF83 97 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 NTF3P20783 257 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 TEX43Q6ZNM6 134 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 KIR2DL5AQ8N109 375 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 CSNK1G2-AS1Q8NCQ2 148 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 KIR2DL5BQ8NHK3 375 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 TMEM191AQ9H0A3 160 aa7.89□□□□□ -1.15
HMGCL-204ENST00000436439 LINC00614P0C842 121 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 ASIPP42127 132 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 KRTDAPP60985 99 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 TWIST1Q15672 202 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 MUC21Q5SSG8 566 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 ZNF664Q8N3J9 261 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 URB1-AS1Q96HZ7 61 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 CSTL1Q9H114 145 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 SCRT2Q9NQ03 307 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 XCL2Q9UBD3 114 aa7.88□□□□□ -1.15
HMGCL-204ENST00000436439 TRGV11A0A075B6L2 103 aa7.87□□□□□ -1.15
HMGCL-204ENST00000436439 IGHV4-4A0A075B6R2 117 aa7.87□□□□□ -1.15
HMGCL-204ENST00000436439 PPBPP02775 128 aa7.87□□□□□ -1.15
HMGCL-204ENST00000436439 RNASE3P12724 160 aaKnown RBP7.87□□□□□ -1.15
HMGCL-204ENST00000436439 DDTP30046 118 aa7.87□□□□□ -1.15
HMGCL-204ENST00000436439 CACNG7P62955 275 aa7.87□□□□□ -1.15
HMGCL-204ENST00000436439 ORMDL3Q8N138 153 aa7.87□□□□□ -1.15
HMGCL-204ENST00000436439 C1orf158Q8N1D5 194 aa7.87□□□□□ -1.15
HMGCL-204ENST00000436439 FAM19A2Q8N3H0 131 aa7.87□□□□□ -1.15
HMGCL-204ENST00000436439 MUC4Q99102 2169 aa7.87□□□□□ -1.15
HMGCL-204ENST00000436439 IGHV3-16A0A0C4DH30 117 aa7.86□□□□□ -1.15
HMGCL-204ENST00000436439 GNRH2O43555 120 aa7.86□□□□□ -1.15
HMGCL-204ENST00000436439 C3orf79P0CE67 100 aa7.86□□□□□ -1.15
HMGCL-204ENST00000436439 ZNF705AQ6ZN79 300 aaPredicted RBP7.86□□□□□ -1.15
HMGCL-204ENST00000436439 PHLDA1Q8WV24 401 aaPredicted RBP7.86□□□□□ -1.15
HMGCL-204ENST00000436439 C9orf85Q96MD7 179 aa7.86□□□□□ -1.15
HMGCL-204ENST00000436439 PRELID3AQ96N28 172 aa7.86□□□□□ -1.15
HMGCL-204ENST00000436439 PRO1933Q9H354 126 aa7.86□□□□□ -1.15
HMGCL-204ENST00000436439 LAMTOR2Q9Y2Q5 125 aa7.86□□□□□ -1.15
HMGCL-204ENST00000436439 GOLT1BQ9Y3E0 138 aa7.86□□□□□ -1.15
HMGCL-204ENST00000436439 IGHV1-24A0A0C4DH33 117 aa7.85□□□□□ -1.15
HMGCL-204ENST00000436439 D6R8Y8 96 aa7.85□□□□□ -1.15
HMGCL-204ENST00000436439 H3BVH4 76 aa7.85□□□□□ -1.15
HMGCL-204ENST00000436439 BTF3P20290 206 aaKnown RBP7.85□□□□□ -1.15
HMGCL-204ENST00000436439 S100A4P26447 101 aaKnown RBP7.85□□□□□ -1.15
HMGCL-204ENST00000436439 MRPL51Q4U2R6 128 aaKnown RBP7.85□□□□□ -1.15
HMGCL-204ENST00000436439 FA2HQ7L5A8 372 aa7.85□□□□□ -1.15
HMGCL-204ENST00000436439 SMIM15Q7Z3B0 74 aa7.85□□□□□ -1.15
HMGCL-204ENST00000436439 AMN1Q8IY45 258 aa7.85□□□□□ -1.15
HMGCL-204ENST00000436439 Q8N976 141 aa7.85□□□□□ -1.15
HMGCL-204ENST00000436439 LINC01587Q99440 93 aa7.85□□□□□ -1.15
HMGCL-204ENST00000436439 CBY3A6NI87 242 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 NXPH4O95158 308 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 CTAG1AP78358 180 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 PMCHL1Q16048 86 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 PRSS3P2Q8NHM4 247 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 PTH2Q96A98 100 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 TMEM208Q9BTX3 173 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 VAMP8Q9BV40 100 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 AP5S1Q9NUS5 200 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 KLK5Q9Y337 293 aaPredicted RBP7.84□□□□□ -1.15
HMGCL-204ENST00000436439 DNAH10Q8IVF4 4471 aa7.84□□□□□ -1.15
HMGCL-204ENST00000436439 CKS2P33552 79 aa7.84□□□□□ -1.16
HMGCL-204ENST00000436439 NANOS2P60321 138 aaKnown RBP7.84□□□□□ -1.16
HMGCL-204ENST00000436439 ZNF415Q09FC8 603 aa7.84□□□□□ -1.16
HMGCL-204ENST00000436439 PIK3CD-AS1Q5SR53 167 aa7.84□□□□□ -1.16
HMGCL-204ENST00000436439 C11orf72Q8NBR9 251 aa7.84□□□□□ -1.16
HMGCL-204ENST00000436439 OR10AG1Q8NH19 301 aa7.84□□□□□ -1.16
HMGCL-204ENST00000436439 RNASE8Q8TDE3 154 aaKnown RBP7.84□□□□□ -1.16
HMGCL-204ENST00000436439 RNF185Q96GF1 192 aa7.84□□□□□ -1.16
HMGCL-204ENST00000436439 NDUFAF3Q9BU61 184 aa7.84□□□□□ -1.16
HMGCL-204ENST00000436439 HSPB8Q9UJY1 196 aa7.84□□□□□ -1.16
HMGCL-204ENST00000436439 PHLDA3Q9Y5J5 127 aa7.84□□□□□ -1.16
HMGCL-204ENST00000436439 MUC21A0A0G2JKD1 596 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 MUC21A0A140T8X8 626 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 SMIM9A6NGZ8 99 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 DEFB4AO15263 64 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 LEPROTL1O95214 131 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 SPANXN1Q5VSR9 72 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 OR11H2Q8NH07 326 aa7.83□□□□□ -1.16
HMGCL-204ENST00000436439 TMEM263Q8WUH6 116 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms