RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 CFAP126Q5VTH2 177 aa16.47■□□□□ 0.23
SMARCAL1-208ENST00000434435 RHODO00212 210 aa16.46■□□□□ 0.23
SMARCAL1-208ENST00000434435 SMIM17P0DL12 118 aa16.46■□□□□ 0.23
SMARCAL1-208ENST00000434435 NANOS2P60321 138 aaKnown RBP16.46■□□□□ 0.23
SMARCAL1-208ENST00000434435 ELOBQ15370 118 aa16.46■□□□□ 0.23
SMARCAL1-208ENST00000434435 POM121L12Q8N7R1 296 aa16.46■□□□□ 0.23
SMARCAL1-208ENST00000434435 STAB2Q8WWQ8 2551 aa16.45■□□□□ 0.22
SMARCAL1-208ENST00000434435 SCO1O75880 301 aa16.45■□□□□ 0.22
SMARCAL1-208ENST00000434435 IGHV3-53P01767 116 aa16.45■□□□□ 0.22
SMARCAL1-208ENST00000434435 CAMPP49913 170 aa16.45■□□□□ 0.22
SMARCAL1-208ENST00000434435 FAM74A4Q5TZK3 123 aa16.45■□□□□ 0.22
SMARCAL1-208ENST00000434435 C14orf178Q8N769 122 aaPredicted RBP16.45■□□□□ 0.22
SMARCAL1-208ENST00000434435 DPH3P1Q9H4G8 78 aa16.45■□□□□ 0.22
SMARCAL1-208ENST00000434435 A0A087WWL8 130 aa16.44■□□□□ 0.22
SMARCAL1-208ENST00000434435 CIDEAO60543 219 aa16.44■□□□□ 0.22
SMARCAL1-208ENST00000434435 ATP5G1P05496 136 aa16.44■□□□□ 0.22
SMARCAL1-208ENST00000434435 EVI2AP22794 236 aa16.44■□□□□ 0.22
SMARCAL1-208ENST00000434435 SAMD10Q9BYL1 202 aa16.44■□□□□ 0.22
SMARCAL1-208ENST00000434435 TGIF2-C20orf24A0A0A6YYL0 155 aa16.43■□□□□ 0.22
SMARCAL1-208ENST00000434435 CRYGDP07320 174 aa16.43■□□□□ 0.22
SMARCAL1-208ENST00000434435 RASL11AQ6T310 242 aa16.43■□□□□ 0.22
SMARCAL1-208ENST00000434435 Q6ZTC4 211 aa16.43■□□□□ 0.22
SMARCAL1-208ENST00000434435 ZNF479Q96JC4 524 aa16.43■□□□□ 0.22
SMARCAL1-208ENST00000434435 TMEM191AQ9H0A3 160 aa16.43■□□□□ 0.22
SMARCAL1-208ENST00000434435 TRBV24-1A0A075B6N3 115 aa16.42■□□□□ 0.22
SMARCAL1-208ENST00000434435 ZFP2Q6ZN57 461 aa16.42■□□□□ 0.22
SMARCAL1-208ENST00000434435 YPEL4Q96NS1 127 aa16.42■□□□□ 0.22
SMARCAL1-208ENST00000434435 MGPP08493 103 aa16.41■□□□□ 0.22
SMARCAL1-208ENST00000434435 GATD1Q8NB37 220 aa16.41■□□□□ 0.22
SMARCAL1-208ENST00000434435 KIF25-AS1Q9Y6Z4 181 aa16.41■□□□□ 0.22
SMARCAL1-208ENST00000434435 IGHV3-73A0A0B4J1V6 119 aa16.4■□□□□ 0.22
SMARCAL1-208ENST00000434435 TRGV4A0A0C4DH28 118 aa16.4■□□□□ 0.22
SMARCAL1-208ENST00000434435 HTN3P15516 51 aa16.4■□□□□ 0.22
SMARCAL1-208ENST00000434435 ZNF56Q15929 161 aa16.4■□□□□ 0.22
SMARCAL1-208ENST00000434435 COX19Q49B96 90 aa16.4■□□□□ 0.22
SMARCAL1-208ENST00000434435 UFSP1Q6NVU6 142 aa16.4■□□□□ 0.22
SMARCAL1-208ENST00000434435 RAB4BP61018 213 aa16.39■□□□□ 0.21
SMARCAL1-208ENST00000434435 FAM210BQ96KR6 192 aa16.38■□□□□ 0.21
SMARCAL1-208ENST00000434435 TRAV10A0A0B4J240 114 aa16.37■□□□□ 0.21
SMARCAL1-208ENST00000434435 F5H768 121 aa16.37■□□□□ 0.21
SMARCAL1-208ENST00000434435 LINC00315P59091 139 aa16.37■□□□□ 0.21
SMARCAL1-208ENST00000434435 FHL2Q14192 279 aa16.37■□□□□ 0.21
SMARCAL1-208ENST00000434435 AMN1Q8IY45 258 aa16.37■□□□□ 0.21
SMARCAL1-208ENST00000434435 F5H697 171 aa16.36■□□□□ 0.21
SMARCAL1-208ENST00000434435 HOXA5P20719 270 aa16.36■□□□□ 0.21
SMARCAL1-208ENST00000434435 TMEM136Q6ZRR5 245 aa16.36■□□□□ 0.21
SMARCAL1-208ENST00000434435 DEFB131BA0A096LNP1 70 aa16.35■□□□□ 0.21
SMARCAL1-208ENST00000434435 GATA1P15976 413 aaPredicted RBP16.35■□□□□ 0.21
SMARCAL1-208ENST00000434435 SLAQ13239 276 aa16.35■□□□□ 0.21
SMARCAL1-208ENST00000434435 FAM104BQ5XKR9 115 aa16.35■□□□□ 0.21
SMARCAL1-208ENST00000434435 GNB1LQ9BYB4 327 aa16.35■□□□□ 0.21
SMARCAL1-208ENST00000434435 HLA-DQA1P01909 254 aa16.34■□□□□ 0.21
SMARCAL1-208ENST00000434435 RNF185Q96GF1 192 aa16.34■□□□□ 0.21
SMARCAL1-208ENST00000434435 TGP01266 2768 aa16.34■□□□□ 0.21
SMARCAL1-208ENST00000434435 MT-ND6P03923 174 aa16.33■□□□□ 0.2
SMARCAL1-208ENST00000434435 RAB4AP20338 218 aa16.33■□□□□ 0.2
SMARCAL1-208ENST00000434435 PRO0255Q9UI72 69 aa16.33■□□□□ 0.2
SMARCAL1-208ENST00000434435 HHLA3Q9XRX5 114 aa16.33■□□□□ 0.2
SMARCAL1-208ENST00000434435 TRBV6-4A0A1B0GX49 114 aa16.32■□□□□ 0.2
SMARCAL1-208ENST00000434435 K7EQD1 137 aa16.32■□□□□ 0.2
SMARCAL1-208ENST00000434435 SUMO4Q6EEV6 95 aa16.32■□□□□ 0.2
SMARCAL1-208ENST00000434435 Q6ZSN1 163 aa16.32■□□□□ 0.2
SMARCAL1-208ENST00000434435 PHLDA1Q8WV24 401 aaPredicted RBP16.32■□□□□ 0.2
SMARCAL1-208ENST00000434435 COLCA2A8K830 154 aa16.31■□□□□ 0.2
SMARCAL1-208ENST00000434435 H7C1H1 209 aa16.31■□□□□ 0.2
SMARCAL1-208ENST00000434435 CRYBA4P53673 196 aa16.31■□□□□ 0.2
SMARCAL1-208ENST00000434435 RHOHQ15669 191 aa16.31■□□□□ 0.2
SMARCAL1-208ENST00000434435 FRZBQ92765 325 aa16.31■□□□□ 0.2
SMARCAL1-208ENST00000434435 MRAP2Q96G30 205 aa16.31■□□□□ 0.2
SMARCAL1-208ENST00000434435 MRPL51Q4U2R6 128 aaKnown RBP16.3■□□□□ 0.2
SMARCAL1-208ENST00000434435 SLC25A29Q8N8R3 303 aa16.3■□□□□ 0.2
SMARCAL1-208ENST00000434435 PAX4O43316 350 aa16.29■□□□□ 0.2
SMARCAL1-208ENST00000434435 PRADC1Q9BSG0 188 aa16.29■□□□□ 0.2
SMARCAL1-208ENST00000434435 MRPL18Q9H0U6 180 aaKnown RBP16.29■□□□□ 0.2
SMARCAL1-208ENST00000434435 TRAV26-1A0A087WT03 109 aa16.28■□□□□ 0.2
SMARCAL1-208ENST00000434435 TRAV26-2A0A0B4J265 109 aa16.28■□□□□ 0.2
SMARCAL1-208ENST00000434435 APCSP02743 223 aa16.28■□□□□ 0.2
SMARCAL1-208ENST00000434435 WWC2-AS2Q96NR7 200 aa16.28■□□□□ 0.2
SMARCAL1-208ENST00000434435 TRAPPC1Q9Y5R8 145 aa16.28■□□□□ 0.2
SMARCAL1-208ENST00000434435 A0A0J9YY99 117 aa16.27■□□□□ 0.2
SMARCAL1-208ENST00000434435 M0QY20 66 aa16.27■□□□□ 0.2
SMARCAL1-208ENST00000434435 CKS2P33552 79 aa16.27■□□□□ 0.2
SMARCAL1-208ENST00000434435 TRBV10-1A0A0K0K1A3 114 aa16.26■□□□□ 0.19
SMARCAL1-208ENST00000434435 NCR2O95944 276 aa16.26■□□□□ 0.19
SMARCAL1-208ENST00000434435 PPBPP02775 128 aa16.26■□□□□ 0.19
SMARCAL1-208ENST00000434435 RAB5AP20339 215 aa16.26■□□□□ 0.19
SMARCAL1-208ENST00000434435 RPS10P46783 165 aaKnown RBP16.26■□□□□ 0.19
SMARCAL1-208ENST00000434435 NUPR2A6NF83 97 aa16.25■□□□□ 0.19
SMARCAL1-208ENST00000434435 D6R8Y8 96 aa16.25■□□□□ 0.19
SMARCAL1-208ENST00000434435 SMKR1H3BMG3 65 aa16.25■□□□□ 0.19
SMARCAL1-208ENST00000434435 P0DMU3 169 aa16.25■□□□□ 0.19
SMARCAL1-208ENST00000434435 FAM231AP0DMU4 169 aa16.25■□□□□ 0.19
SMARCAL1-208ENST00000434435 FAM231CP0DMU5 169 aa16.25■□□□□ 0.19
SMARCAL1-208ENST00000434435 FABP9Q0Z7S8 132 aa16.25■□□□□ 0.19
SMARCAL1-208ENST00000434435 ORMDL3Q8N138 153 aa16.25■□□□□ 0.19
SMARCAL1-208ENST00000434435 VSIG2Q96IQ7 327 aa16.25■□□□□ 0.19
SMARCAL1-208ENST00000434435 DNAH7Q8WXX0 4024 aa16.24■□□□□ 0.19
SMARCAL1-208ENST00000434435 H3BNG1 76 aa16.24■□□□□ 0.19
SMARCAL1-208ENST00000434435 GYPEP15421 78 aa16.24■□□□□ 0.19
SMARCAL1-208ENST00000434435 LOC100131303A0A0U1RQF7 123 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms