RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 IGHV3-73A0A0B4J1V6 119 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 LOC100131303A0A0U1RQF7 123 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 M0R381 172 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 RHODO00212 210 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 P01737 135 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 CRYGDP07320 174 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 IGLC6P0CF74 106 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 SRIP30626 198 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 RHOHQ15669 191 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 LYPD5Q6UWN5 251 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 Q6ZSN1 163 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 OR2D3Q8NGH3 330 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 OR10AG1Q8NH19 301 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 NUDT11Q96G61 164 aa12.64□□□□□ -0.39
HLA-F-220ENST00000434407 SH2D6Q7Z4S9 175 aa12.63□□□□□ -0.39
HLA-F-220ENST00000434407 PRADC1Q9BSG0 188 aa12.63□□□□□ -0.39
HLA-F-220ENST00000434407 Q9H8V8 135 aa12.63□□□□□ -0.39
HLA-F-220ENST00000434407 M0R2N4 97 aa12.62□□□□□ -0.39
HLA-F-220ENST00000434407 GZMBP10144 247 aa12.62□□□□□ -0.39
HLA-F-220ENST00000434407 EPPK1P58107 5090 aaKnown RBP12.62□□□□□ -0.39
HLA-F-220ENST00000434407 FAT2Q9NYQ8 4349 aa12.61□□□□□ -0.39
HLA-F-220ENST00000434407 NBDYA0A0U1RRE5 68 aa12.61□□□□□ -0.39
HLA-F-220ENST00000434407 XKRY2A2RUG3 117 aa12.61□□□□□ -0.39
HLA-F-220ENST00000434407 F8W036 122 aa12.61□□□□□ -0.39
HLA-F-220ENST00000434407 TIRAPP58753 221 aa12.61□□□□□ -0.39
HLA-F-220ENST00000434407 SMIM7Q9BQ49 75 aa12.61□□□□□ -0.39
HLA-F-220ENST00000434407 CEBPGP53567 150 aa12.6□□□□□ -0.39
HLA-F-220ENST00000434407 FAM231DQ6ZW35 169 aa12.6□□□□□ -0.39
HLA-F-220ENST00000434407 FER1L6-AS1Q8NA97 138 aa12.6□□□□□ -0.39
HLA-F-220ENST00000434407 SEC11CQ9BY50 192 aa12.6□□□□□ -0.39
HLA-F-220ENST00000434407 RNASE7Q9H1E1 156 aaKnown RBP12.6□□□□□ -0.39
HLA-F-220ENST00000434407 A0A087WWL8 130 aa12.59□□□□□ -0.39
HLA-F-220ENST00000434407 LINC00694P0DN24 101 aa12.59□□□□□ -0.39
HLA-F-220ENST00000434407 SOHLH1Q5JUK2 328 aa12.59□□□□□ -0.39
HLA-F-220ENST00000434407 SPANXN1Q5VSR9 72 aa12.59□□□□□ -0.39
HLA-F-220ENST00000434407 C14orf178Q8N769 122 aaPredicted RBP12.59□□□□□ -0.39
HLA-F-220ENST00000434407 RPP21Q9H633 154 aaKnown RBP12.59□□□□□ -0.39
HLA-F-220ENST00000434407 MUC21A0A0G2JKD1 596 aa12.58□□□□□ -0.4
HLA-F-220ENST00000434407 MUC21A0A140T8X8 626 aa12.58□□□□□ -0.4
HLA-F-220ENST00000434407 A0A1W2PPQ1 181 aa12.58□□□□□ -0.4
HLA-F-220ENST00000434407 F2Z2F3 143 aa12.58□□□□□ -0.4
HLA-F-220ENST00000434407 C10orf91Q5T1B1 145 aa12.58□□□□□ -0.4
HLA-F-220ENST00000434407 FAM74A4Q5TZK3 123 aa12.58□□□□□ -0.4
HLA-F-220ENST00000434407 LINC01551Q86U37 167 aa12.58□□□□□ -0.4
HLA-F-220ENST00000434407 Q9UF83 564 aa12.58□□□□□ -0.4
HLA-F-220ENST00000434407 ZNF727A8MUV8 499 aa12.57□□□□□ -0.4
HLA-F-220ENST00000434407 RTL8CO15255 209 aa12.57□□□□□ -0.4
HLA-F-220ENST00000434407 WDR73Q6P4I2 378 aa12.57□□□□□ -0.4
HLA-F-220ENST00000434407 CARHSP1Q9Y2V2 147 aaKnown RBP12.57□□□□□ -0.4
HLA-F-220ENST00000434407 KIF25-AS1Q9Y6Z4 181 aa12.57□□□□□ -0.4
HLA-F-220ENST00000434407 SIVA1O15304 175 aa12.56□□□□□ -0.4
HLA-F-220ENST00000434407 APOC3P02656 99 aa12.56□□□□□ -0.4
HLA-F-220ENST00000434407 ADCYAP1P18509 176 aa12.56□□□□□ -0.4
HLA-F-220ENST00000434407 CTRLP40313 264 aa12.56□□□□□ -0.4
HLA-F-220ENST00000434407 CACNG7P62955 275 aa12.56□□□□□ -0.4
HLA-F-220ENST00000434407 FAM74A3Q4VXF1 159 aa12.56□□□□□ -0.4
HLA-F-220ENST00000434407 CNFNQ9BYD5 112 aa12.56□□□□□ -0.4
HLA-F-220ENST00000434407 KRTAP1-5Q9BYS1 174 aa12.56□□□□□ -0.4
HLA-F-220ENST00000434407 HECTD4Q9Y4D8 3996 aa12.56□□□□□ -0.4
HLA-F-220ENST00000434407 LINC00315P59091 139 aa12.55□□□□□ -0.4
HLA-F-220ENST00000434407 RAB4BP61018 213 aa12.55□□□□□ -0.4
HLA-F-220ENST00000434407 TTC32Q5I0X7 151 aa12.55□□□□□ -0.4
HLA-F-220ENST00000434407 LYZL1Q6UWQ5 148 aa12.55□□□□□ -0.4
HLA-F-220ENST00000434407 LINC00336Q6ZUF6 198 aa12.55□□□□□ -0.4
HLA-F-220ENST00000434407 TRBV10-1A0A0K0K1A3 114 aa12.54□□□□□ -0.4
HLA-F-220ENST00000434407 GATCO43716 136 aaKnown RBP12.54□□□□□ -0.4
HLA-F-220ENST00000434407 CT83Q5H943 113 aa12.54□□□□□ -0.4
HLA-F-220ENST00000434407 C1orf134Q5TEV5 83 aa12.54□□□□□ -0.4
HLA-F-220ENST00000434407 ATP6V0E2Q8NHE4 81 aa12.54□□□□□ -0.4
HLA-F-220ENST00000434407 AP1S3Q96PC3 154 aa12.54□□□□□ -0.4
HLA-F-220ENST00000434407 TPPP3Q9BW30 176 aa12.54□□□□□ -0.4
HLA-F-220ENST00000434407 MSRB1Q9NZV6 116 aa12.54□□□□□ -0.4
HLA-F-220ENST00000434407 TMEM241Q24JQ0 296 aa12.53□□□□□ -0.4
HLA-F-220ENST00000434407 SVBPQ8N300 66 aa12.53□□□□□ -0.4
HLA-F-220ENST00000434407 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
HLA-F-220ENST00000434407 GTSF1LQ9H1H1 148 aa12.53□□□□□ -0.4
HLA-F-220ENST00000434407 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
HLA-F-220ENST00000434407 GAGE12JA6NER3 117 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 A8MWL6 223 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 BTF3P20290 206 aaKnown RBP12.52□□□□□ -0.41
HLA-F-220ENST00000434407 FOXA3P55318 350 aaPredicted RBP12.52□□□□□ -0.41
HLA-F-220ENST00000434407 ERVFC1-1P60608 527 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 SSTP61278 116 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 GAGE1Q13065 139 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 GAGE4Q13068 117 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 GAGE5Q13069 117 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 GAGE13Q4V321 117 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 OR10G8Q8NGN5 311 aa12.52□□□□□ -0.41
HLA-F-220ENST00000434407 DNAH10OSP0CZ25 163 aa12.51□□□□□ -0.41
HLA-F-220ENST00000434407 NTF3P20783 257 aa12.51□□□□□ -0.41
HLA-F-220ENST00000434407 LELP1Q5T871 98 aa12.51□□□□□ -0.41
HLA-F-220ENST00000434407 C6orf223Q8N319 242 aa12.51□□□□□ -0.41
HLA-F-220ENST00000434407 SMIM17P0DL12 118 aa12.5□□□□□ -0.41
HLA-F-220ENST00000434407 RPL23P62829 140 aaKnown RBP12.5□□□□□ -0.41
HLA-F-220ENST00000434407 ZNF56Q15929 161 aa12.5□□□□□ -0.41
HLA-F-220ENST00000434407 ISOC2Q96AB3 205 aa12.5□□□□□ -0.41
HLA-F-220ENST00000434407 NAT8Q9UHE5 227 aa12.5□□□□□ -0.41
HLA-F-220ENST00000434407 TRBV7-3A0A075B6L6 115 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms