RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 H3BVH4 76 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 NUDT3O95989 172 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 LGALS1P09382 135 aaKnown RBP5.57□□□□□ -1.52
COL17A1-204ENST00000433822 RNASE3P12724 160 aaKnown RBP5.57□□□□□ -1.52
COL17A1-204ENST00000433822 COX6B1P14854 86 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 MPV17L2Q567V2 206 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 Q8N2B8 174 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 SPATA3Q8NHX4 192 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 TMEM158Q8WZ71 300 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 UBE2E2Q96LR5 201 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 LINC00527Q9UJ94 153 aa5.57□□□□□ -1.52
COL17A1-204ENST00000433822 A0A087WX48 190 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 A6NDN8 102 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 A8MTW9 85 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 LINC01619G3V211 115 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 K7EQG2 157 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 TAX1BP3O14907 124 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 DPM2O94777 84 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 DUSP14O95147 198 aaKnown RBP5.56□□□□□ -1.52
COL17A1-204ENST00000433822 IGKCP01834 107 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 NPSP0C0P6 89 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 SMIM17P0DL12 118 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 S100A4P26447 101 aaKnown RBP5.56□□□□□ -1.52
COL17A1-204ENST00000433822 PLNP26678 52 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 TFPI2P48307 235 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 SUMO2P61956 95 aaKnown RBP5.56□□□□□ -1.52
COL17A1-204ENST00000433822 TAL2Q16559 108 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 DEFB112Q30KQ8 113 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 ANXA2RQ3ZCQ2 193 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 TMEM97Q5BJF2 176 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 PIK3CD-AS1Q5SR53 167 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 Q6YL49 198 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 TMEM86BQ8N661 226 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 NRGNQ92686 78 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 TOMM6Q96B49 74 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 EDA2RQ9HAV5 297 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 HHLA3Q9XRX5 114 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 PHLDA3Q9Y5J5 127 aa5.56□□□□□ -1.52
COL17A1-204ENST00000433822 NOTCH1P46531 2555 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 MUC21A0A0G2JKD1 596 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 A0A0J9YX75 114 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 TRBV6-5A0A0K0K1A5 114 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 MUC21A0A140T8X8 626 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 H3BRM9 83 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 IGHV3-11P01762 117 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 IGHV4-59P01825 116 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 SNRPD3P62318 126 aaKnown RBP5.55□□□□□ -1.52
COL17A1-204ENST00000433822 TM4SF20Q53R12 229 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 MUC21Q5SSG8 566 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 ADAMTSL5Q6ZMM2 481 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 RASL10AQ92737 203 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 C9orf85Q96MD7 179 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 WWC2-AS2Q96NR7 200 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 KIF25-AS1Q9Y6Z4 181 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 ANK2Q01484 3957 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 HIVEP2P31629 2446 aa5.55□□□□□ -1.52
COL17A1-204ENST00000433822 ANK3Q12955 4377 aaKnown RBP5.55□□□□□ -1.52
COL17A1-204ENST00000433822 F8VRH5 84 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.54□□□□□ -1.52
COL17A1-204ENST00000433822 H7C1H1 209 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 K7EP13 123 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 GAS8-AS1O95177 125 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 PRSS1P07477 247 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 IGHV4-31P0DP07 118 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 FHL2Q14192 279 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 PAPPA-AS1Q5QFB9 102 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 FAM159AQ6UWV7 190 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 FOXI2Q6ZQN5 318 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 PTH2Q96A98 100 aa5.54□□□□□ -1.52
COL17A1-204ENST00000433822 MEGF8Q7Z7M0 2845 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 H0Y8G0 127 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 PRB4P10163 310 aaPredicted RBP5.53□□□□□ -1.52
COL17A1-204ENST00000433822 GATA1P15976 413 aaPredicted RBP5.53□□□□□ -1.52
COL17A1-204ENST00000433822 PTTG1IPP53801 180 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 POLR2KP53803 58 aaKnown RBP5.53□□□□□ -1.52
COL17A1-204ENST00000433822 LINC00315P59091 139 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 RPL11P62913 178 aaKnown RBP5.53□□□□□ -1.52
COL17A1-204ENST00000433822 DEFB113Q30KQ7 82 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 ERASQ7Z444 233 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 CLUHP3Q96NS8 147 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 FOXC2Q99958 501 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 LINC00467Q9BRT7 94 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 MCRIP2Q9BUT9 160 aaKnown RBP5.53□□□□□ -1.52
COL17A1-204ENST00000433822 ZNF702PQ9H963 129 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 DKK2Q9UBU2 259 aa5.53□□□□□ -1.52
COL17A1-204ENST00000433822 ZNF256Q9Y2P7 627 aaPredicted RBP5.53□□□□□ -1.52
COL17A1-204ENST00000433822 TRGV11A0A075B6L2 103 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 TRBV27A0A0K0K1C4 114 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 CBY3A6NI87 242 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 TGFAP01135 160 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 RNASE4P34096 147 aaKnown RBP5.52□□□□□ -1.53
COL17A1-204ENST00000433822 CDKN1BP46527 198 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 RHOHQ15669 191 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 NEXN-AS1Q8NBZ9 246 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 TMEM141Q96I45 108 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 TIMM17AQ99595 171 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 TM2D2Q9BX73 214 aa5.52□□□□□ -1.53
COL17A1-204ENST00000433822 TIMM8BQ9Y5J9 83 aaPredicted RBP5.52□□□□□ -1.53
COL17A1-204ENST00000433822 SVEP1Q4LDE5 3571 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms