RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 PPDPFLQ8WWR9 84 aa11.17□□□□□ -0.62
DDX56-205ENST00000433257 SELENOKQ9Y6D0 94 aa11.17□□□□□ -0.62
DDX56-205ENST00000433257 ANKRD17O75179 2603 aaKnown RBP11.17□□□□□ -0.62
DDX56-205ENST00000433257 LY6HO94772 140 aa11.16□□□□□ -0.62
DDX56-205ENST00000433257 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
DDX56-205ENST00000433257 C14orf178Q8N769 122 aaPredicted RBP11.16□□□□□ -0.62
DDX56-205ENST00000433257 AJUBAQ96IF1 538 aa11.16□□□□□ -0.62
DDX56-205ENST00000433257 NAV2Q8IVL1 2488 aa11.16□□□□□ -0.62
DDX56-205ENST00000433257 PDZD2O15018 2839 aa11.15□□□□□ -0.62
DDX56-205ENST00000433257 TRBV6-5A0A0K0K1A5 114 aa11.15□□□□□ -0.62
DDX56-205ENST00000433257 TMEM262E9PQX1 116 aa11.15□□□□□ -0.62
DDX56-205ENST00000433257 G3V318 75 aa11.15□□□□□ -0.62
DDX56-205ENST00000433257 ID1P41134 155 aa11.15□□□□□ -0.62
DDX56-205ENST00000433257 PRR9Q5T870 116 aa11.15□□□□□ -0.62
DDX56-205ENST00000433257 SH2D6Q7Z4S9 175 aa11.15□□□□□ -0.62
DDX56-205ENST00000433257 KLK15Q9H2R5 256 aa11.15□□□□□ -0.62
DDX56-205ENST00000433257 IGF1P05019 195 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 AMTNQ6UX39 209 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 ODF3Q96PU9 254 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 IGHV3OR16-13A0A075B7E8 117 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 IGHV3-74A0A0B4J1X5 117 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 TSPAN13O95857 204 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 IGHV1-69P01742 117 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 CD7P09564 240 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 RHOHQ15669 191 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 TEN1Q86WV5 123 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 GPHB5Q86YW7 130 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 SBSPONQ8IVN8 264 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 RPL39LQ96EH5 51 aaKnown RBP11.14□□□□□ -0.63
DDX56-205ENST00000433257 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
DDX56-205ENST00000433257 VPS13CQ709C8 3753 aa11.13□□□□□ -0.63
DDX56-205ENST00000433257 IGIPA6NJ69 53 aa11.13□□□□□ -0.63
DDX56-205ENST00000433257 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
DDX56-205ENST00000433257 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
DDX56-205ENST00000433257 FAM159AQ6UWV7 190 aa11.13□□□□□ -0.63
DDX56-205ENST00000433257 ZFP2Q6ZN57 461 aa11.13□□□□□ -0.63
DDX56-205ENST00000433257 NDUFA11Q86Y39 141 aa11.13□□□□□ -0.63
DDX56-205ENST00000433257 SYT8Q8NBV8 401 aa11.13□□□□□ -0.63
DDX56-205ENST00000433257 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
DDX56-205ENST00000433257 A0A0J9YY99 117 aa11.12□□□□□ -0.63
DDX56-205ENST00000433257 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
DDX56-205ENST00000433257 PSMB2P49721 201 aa11.12□□□□□ -0.63
DDX56-205ENST00000433257 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
DDX56-205ENST00000433257 KIF25-AS1Q9Y6Z4 181 aa11.12□□□□□ -0.63
DDX56-205ENST00000433257 LOC107984156A0A0G2JMH3 177 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 A8MWV9 139 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 KLLNB2CW77 178 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 K7EMT4 169 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
DDX56-205ENST00000433257 CRYBA4P53673 196 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 CKS1BP61024 79 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 Q5PR19 223 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 ARL17AQ8IVW1 177 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 C10orf126Q8N4M7 172 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 ZNF418Q8TF45 676 aaPredicted RBP11.11□□□□□ -0.63
DDX56-205ENST00000433257 TP53TG1Q9Y2A0 90 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 IGLV4-69A0A075B6H9 119 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 LGALS9O00182 355 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 LGALS3P17931 250 aaKnown RBP11.11□□□□□ -0.63
DDX56-205ENST00000433257 DSCR9P59020 149 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 CLEC2AQ6UVW9 174 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 NFE4Q86UQ8 179 aa11.11□□□□□ -0.63
DDX56-205ENST00000433257 AKAP9Q99996 3911 aa11.1□□□□□ -0.63
DDX56-205ENST00000433257 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.1□□□□□ -0.63
DDX56-205ENST00000433257 DUSP14O95147 198 aaKnown RBP11.1□□□□□ -0.63
DDX56-205ENST00000433257 CRYGDP07320 174 aa11.1□□□□□ -0.63
DDX56-205ENST00000433257 NSUN5P1Q3KNT7 163 aa11.1□□□□□ -0.63
DDX56-205ENST00000433257 ZNF876PQ49A33 203 aa11.1□□□□□ -0.63
DDX56-205ENST00000433257 PRO1854Q9UHT4 67 aa11.1□□□□□ -0.63
DDX56-205ENST00000433257 AGRNO00468 2067 aa11.09□□□□□ -0.63
DDX56-205ENST00000433257 A0A0J9YX75 114 aa11.09□□□□□ -0.63
DDX56-205ENST00000433257 IGHV3-30P01768 117 aa11.09□□□□□ -0.63
DDX56-205ENST00000433257 IGHV3-30-5P0DP03 117 aa11.09□□□□□ -0.63
DDX56-205ENST00000433257 LMO4P61968 165 aa11.09□□□□□ -0.63
DDX56-205ENST00000433257 PLEKHB2Q96CS7 222 aa11.09□□□□□ -0.63
DDX56-205ENST00000433257 ZNF580Q9UK33 172 aa11.09□□□□□ -0.63
DDX56-205ENST00000433257 CCDC168Q8NDH2 2452 aa11.09□□□□□ -0.63
DDX56-205ENST00000433257 TEX15Q9BXT5 2789 aa11.08□□□□□ -0.64
DDX56-205ENST00000433257 A0A0B4J2C4 111 aa11.08□□□□□ -0.64
DDX56-205ENST00000433257 LEPROTO15243 131 aa11.08□□□□□ -0.64
DDX56-205ENST00000433257 LINC00315P59091 139 aa11.08□□□□□ -0.64
DDX56-205ENST00000433257 DAZ1Q9NQZ3 744 aaKnown RBP11.08□□□□□ -0.64
DDX56-205ENST00000433257 LINC01548A6NM66 108 aa11.08□□□□□ -0.64
DDX56-205ENST00000433257 IGHG2P01859 326 aa11.08□□□□□ -0.64
DDX56-205ENST00000433257 WFDC11Q8NEX6 87 aa11.08□□□□□ -0.64
DDX56-205ENST00000433257 Q96MF0 132 aa11.08□□□□□ -0.64
DDX56-205ENST00000433257 PRRC2AP48634 2157 aaKnown RBP11.07□□□□□ -0.64
DDX56-205ENST00000433257 J3QQQ9 107 aa11.07□□□□□ -0.64
DDX56-205ENST00000433257 ZNF688P0C7X2 276 aa11.07□□□□□ -0.64
DDX56-205ENST00000433257 P0DMU3 169 aa11.07□□□□□ -0.64
DDX56-205ENST00000433257 FAM231AP0DMU4 169 aa11.07□□□□□ -0.64
DDX56-205ENST00000433257 FAM231CP0DMU5 169 aa11.07□□□□□ -0.64
DDX56-205ENST00000433257 TMEM170BQ5T4T1 132 aa11.07□□□□□ -0.64
DDX56-205ENST00000433257 SUMO4Q6EEV6 95 aa11.07□□□□□ -0.64
DDX56-205ENST00000433257 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
DDX56-205ENST00000433257 LINC01600Q96MT4 127 aa11.07□□□□□ -0.64
DDX56-205ENST00000433257 PIMREGQ9BSJ6 248 aa11.07□□□□□ -0.64
DDX56-205ENST00000433257 CREBBPQ92793 2442 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 245 ms