RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 VWC2LB2RUY7 222 aa9.6□□□□□ -0.87
LRRTM1-206ENST00000433224 NPC2P61916 151 aa9.6□□□□□ -0.87
LRRTM1-206ENST00000433224 Q8N976 141 aa9.6□□□□□ -0.87
LRRTM1-206ENST00000433224 FLNCQ14315 2725 aa9.6□□□□□ -0.87
LRRTM1-206ENST00000433224 RAI1Q7Z5J4 1906 aaPredicted RBP9.6□□□□□ -0.87
LRRTM1-206ENST00000433224 PPP1R17O96001 155 aa9.6□□□□□ -0.87
LRRTM1-206ENST00000433224 IGHV3-38A0A0C4DH36 116 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 LINC01549A6NIU2 74 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 ELANEP08246 267 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 RBX1P62877 108 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 C2orf66Q6UXQ4 117 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 DPH3P1Q9H4G8 78 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 TRBV25-1A0A075B6N4 114 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 A8MWV9 139 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 IGHG2P01859 326 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 Q8N8P6 123 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 SNCGO76070 127 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 PTPRBP23467 1997 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 CKS1BP61024 79 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 TMEM190Q8WZ59 177 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 VCX2Q9H322 139 aa9.59□□□□□ -0.87
LRRTM1-206ENST00000433224 TRGV11A0A075B6L2 103 aa9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 AZU1P20160 251 aa9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 DLX4Q92988 240 aaPredicted RBP9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 CRYGBP07316 175 aa9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 MRAP2Q96G30 205 aa9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 TMEM238C9JI98 176 aa9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 CCL24O00175 119 aa9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 TNFRSF13BO14836 293 aaPredicted RBP9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 C3orf56Q8N813 242 aa9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 PRADC1Q9BSG0 188 aa9.58□□□□□ -0.88
LRRTM1-206ENST00000433224 A6NDX4 124 aa9.57□□□□□ -0.88
LRRTM1-206ENST00000433224 IGF1P05019 195 aa9.57□□□□□ -0.88
LRRTM1-206ENST00000433224 WI2-2373I1.2A0A1W2PRP0 233 aa9.57□□□□□ -0.88
LRRTM1-206ENST00000433224 MEIG1Q5JSS6 88 aa9.57□□□□□ -0.88
LRRTM1-206ENST00000433224 CEND1Q8N111 149 aa9.57□□□□□ -0.88
LRRTM1-206ENST00000433224 TACC2O95359 2948 aa9.57□□□□□ -0.88
LRRTM1-206ENST00000433224 LGALS1P09382 135 aaKnown RBP9.57□□□□□ -0.88
LRRTM1-206ENST00000433224 DEFB121Q5J5C9 76 aa9.57□□□□□ -0.88
LRRTM1-206ENST00000433224 WDFY3Q8IZQ1 3526 aa9.56□□□□□ -0.88
LRRTM1-206ENST00000433224 IGHV4-31P0DP07 118 aa9.56□□□□□ -0.88
LRRTM1-206ENST00000433224 CD28P10747 220 aa9.56□□□□□ -0.88
LRRTM1-206ENST00000433224 WFDC2Q14508 124 aa9.56□□□□□ -0.88
LRRTM1-206ENST00000433224 CHCHD5Q9BSY4 110 aa9.56□□□□□ -0.88
LRRTM1-206ENST00000433224 INS-IGF2F8WCM5 200 aa9.56□□□□□ -0.88
LRRTM1-206ENST00000433224 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
LRRTM1-206ENST00000433224 SPINK8P0C7L1 97 aa9.56□□□□□ -0.88
LRRTM1-206ENST00000433224 C12orf74Q32Q52 190 aa9.56□□□□□ -0.88
LRRTM1-206ENST00000433224 GAGE12HA6NDE8 117 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 ZNF80P51504 273 aaPredicted RBP9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 PAPPA-AS1Q5QFB9 102 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 SMR3AQ99954 134 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 ANAPC13Q9BS18 74 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 SMIM2Q9BVW6 85 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 TP53TG1Q9Y2A0 90 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 TNRC6BQ9UPQ9 1833 aaKnown RBP9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 TET2Q6N021 2002 aaPredicted RBP9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 GAGE7O76087 117 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 INSP01308 110 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 GAGE12FP0CL80 117 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 GAGE12GP0CL81 117 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 GAGE12IP0CL82 117 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 BOD1L2Q8IYS8 172 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 CITED2Q99967 270 aaPredicted RBP9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 IGHV1OR15-1A0A075B7D0 117 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 F8VRH5 84 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 HLA-DRB4P13762 266 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 HLA-DRB4X5D2U9 266 aa9.55□□□□□ -0.88
LRRTM1-206ENST00000433224 A0A096LPF7 62 aa9.54□□□□□ -0.88
LRRTM1-206ENST00000433224 ZNF415Q09FC8 603 aa9.54□□□□□ -0.88
LRRTM1-206ENST00000433224 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
LRRTM1-206ENST00000433224 KALRNO60229 2985 aa9.54□□□□□ -0.88
LRRTM1-206ENST00000433224 MYMXA0A1B0GTQ4 84 aa9.54□□□□□ -0.88
LRRTM1-206ENST00000433224 C9JAW5 83 aa9.54□□□□□ -0.88
LRRTM1-206ENST00000433224 C16orf54Q6UWD8 224 aa9.54□□□□□ -0.88
LRRTM1-206ENST00000433224 TMEM61Q8N0U2 210 aa9.54□□□□□ -0.88
LRRTM1-206ENST00000433224 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 CHD6Q8TD26 2715 aa9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 GAGE12JA6NER3 117 aa9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 SIVA1O15304 175 aa9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 GAGE4Q13068 117 aa9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 GAGE5Q13069 117 aa9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 IGSF10Q6WRI0 2623 aa9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 TRAV13-1A0A0B4J241 112 aa9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 URB1-AS1Q96HZ7 61 aa9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 JPT2Q9H910 190 aa9.53□□□□□ -0.88
LRRTM1-206ENST00000433224 SDHAF1A6NFY7 115 aa9.52□□□□□ -0.89
LRRTM1-206ENST00000433224 DNAJC9-AS1A6NH13 148 aa9.52□□□□□ -0.89
LRRTM1-206ENST00000433224 RPL39LQ96EH5 51 aaKnown RBP9.52□□□□□ -0.89
LRRTM1-206ENST00000433224 C18orf65Q6ZTR6 163 aa9.52□□□□□ -0.89
LRRTM1-206ENST00000433224 A0A087WX48 190 aa9.52□□□□□ -0.89
LRRTM1-206ENST00000433224 CRIP1P50238 77 aa9.52□□□□□ -0.89
LRRTM1-206ENST00000433224 IGLL5B9A064 214 aa9.51□□□□□ -0.89
LRRTM1-206ENST00000433224 F8W1H4 67 aa9.51□□□□□ -0.89
LRRTM1-206ENST00000433224 VCYO14598 125 aa9.51□□□□□ -0.89
LRRTM1-206ENST00000433224 CIRBPQ14011 172 aaKnown RBP9.51□□□□□ -0.89
LRRTM1-206ENST00000433224 SPXQ9BT56 116 aa9.51□□□□□ -0.89
LRRTM1-206ENST00000433224 PRSS29PA6NIE9 313 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms