RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 UBE2WQ96B02 151 aa9.73□□□□□ -0.85
PRKDC-203ENST00000432581 TNFSF18Q9UNG2 199 aa9.73□□□□□ -0.85
PRKDC-203ENST00000432581 LRP1Q07954 4544 aaKnown RBP9.73□□□□□ -0.85
PRKDC-203ENST00000432581 IFNA7P01567 189 aa9.72□□□□□ -0.85
PRKDC-203ENST00000432581 IGLV2-8P01709 118 aa9.72□□□□□ -0.85
PRKDC-203ENST00000432581 Q0VG73 95 aa9.72□□□□□ -0.85
PRKDC-203ENST00000432581 C14orf177Q52M58 125 aa9.72□□□□□ -0.85
PRKDC-203ENST00000432581 FAM74A4Q5TZK3 123 aa9.72□□□□□ -0.85
PRKDC-203ENST00000432581 ATRAIDQ6UW56 229 aa9.72□□□□□ -0.85
PRKDC-203ENST00000432581 KRBOX1C9JBD0 128 aa9.71□□□□□ -0.86
PRKDC-203ENST00000432581 ARMS2P0C7Q2 107 aa9.71□□□□□ -0.86
PRKDC-203ENST00000432581 Q86TA4 180 aa9.71□□□□□ -0.86
PRKDC-203ENST00000432581 DNAJC30Q96LL9 226 aa9.71□□□□□ -0.86
PRKDC-203ENST00000432581 AQP10Q96PS8 301 aa9.71□□□□□ -0.86
PRKDC-203ENST00000432581 TRBV10-1A0A0K0K1A3 114 aa9.7□□□□□ -0.86
PRKDC-203ENST00000432581 PEX7O00628 323 aa9.7□□□□□ -0.86
PRKDC-203ENST00000432581 HIST1H2BAQ96A08 127 aa9.7□□□□□ -0.86
PRKDC-203ENST00000432581 SFRP2Q96HF1 295 aa9.7□□□□□ -0.86
PRKDC-203ENST00000432581 NKX6-2Q9C056 277 aaPredicted RBP9.7□□□□□ -0.86
PRKDC-203ENST00000432581 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
PRKDC-203ENST00000432581 A0A087WWL8 130 aa9.69□□□□□ -0.86
PRKDC-203ENST00000432581 TPT1P13693 172 aaKnown RBP9.69□□□□□ -0.86
PRKDC-203ENST00000432581 RPL36AP83881 106 aaKnown RBP9.69□□□□□ -0.86
PRKDC-203ENST00000432581 FAM162BQ5T6X4 162 aa9.69□□□□□ -0.86
PRKDC-203ENST00000432581 COX8CQ7Z4L0 72 aa9.69□□□□□ -0.86
PRKDC-203ENST00000432581 RPL36ALQ969Q0 106 aaKnown RBP9.69□□□□□ -0.86
PRKDC-203ENST00000432581 C1orf43Q9BWL3 253 aa9.69□□□□□ -0.86
PRKDC-203ENST00000432581 ZFP30Q9Y2G7 519 aa9.69□□□□□ -0.86
PRKDC-203ENST00000432581 TRBV7-3A0A075B6L6 115 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 GRIFINA4D1Z8 144 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 M0R036 132 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 SH2D1AO60880 128 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 CRIP1P50238 77 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 UBE2D3P61077 147 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 UBE2D2P62837 147 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 ZFP82Q8N141 532 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 ZC2HC1AQ96GY0 325 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 PLA2G2DQ9UNK4 145 aa9.68□□□□□ -0.86
PRKDC-203ENST00000432581 CTXND1A0A1B0GTU2 59 aa9.67□□□□□ -0.86
PRKDC-203ENST00000432581 TMEM262E9PQX1 116 aa9.67□□□□□ -0.86
PRKDC-203ENST00000432581 M0R381 172 aa9.67□□□□□ -0.86
PRKDC-203ENST00000432581 CRPP02741 224 aa9.67□□□□□ -0.86
PRKDC-203ENST00000432581 UBE2G2P60604 165 aa9.67□□□□□ -0.86
PRKDC-203ENST00000432581 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
PRKDC-203ENST00000432581 FAM74A7A6NL05 159 aa9.66□□□□□ -0.86
PRKDC-203ENST00000432581 RPL37AP61513 92 aaKnown RBP9.66□□□□□ -0.86
PRKDC-203ENST00000432581 LINC01559Q495D7 138 aa9.66□□□□□ -0.86
PRKDC-203ENST00000432581 OR10G8Q8NGN5 311 aa9.66□□□□□ -0.86
PRKDC-203ENST00000432581 FMC1Q96HJ9 113 aa9.66□□□□□ -0.86
PRKDC-203ENST00000432581 ALG5Q9Y673 324 aa9.66□□□□□ -0.86
PRKDC-203ENST00000432581 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
PRKDC-203ENST00000432581 TRBV6-8A0A0A6YYG3 113 aa9.65□□□□□ -0.86
PRKDC-203ENST00000432581 PKIAP61925 76 aa9.65□□□□□ -0.86
PRKDC-203ENST00000432581 UBE2G1P62253 170 aa9.65□□□□□ -0.86
PRKDC-203ENST00000432581 ZNF726P1Q15940 193 aa9.65□□□□□ -0.86
PRKDC-203ENST00000432581 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
PRKDC-203ENST00000432581 ENHOQ6UWT2 76 aa9.65□□□□□ -0.86
PRKDC-203ENST00000432581 INO80EQ8NBZ0 244 aaPredicted RBP9.65□□□□□ -0.86
PRKDC-203ENST00000432581 TMSB15BA0A087X1C1 80 aa9.64□□□□□ -0.87
PRKDC-203ENST00000432581 BORCS7-ASMTA0A0B4J1R7 106 aa9.64□□□□□ -0.87
PRKDC-203ENST00000432581 RPL7L1Q6DKI1 246 aaKnown RBP9.64□□□□□ -0.87
PRKDC-203ENST00000432581 C15orf54Q8N8G6 183 aa9.64□□□□□ -0.87
PRKDC-203ENST00000432581 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.64□□□□□ -0.87
PRKDC-203ENST00000432581 TCEAL7Q9BRU2 100 aa9.64□□□□□ -0.87
PRKDC-203ENST00000432581 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
PRKDC-203ENST00000432581 ANGP03950 147 aaKnown RBP9.63□□□□□ -0.87
PRKDC-203ENST00000432581 RAB4BP61018 213 aa9.63□□□□□ -0.87
PRKDC-203ENST00000432581 DGAT2L7PQ6IED9 249 aa9.63□□□□□ -0.87
PRKDC-203ENST00000432581 MED28Q9H204 178 aa9.63□□□□□ -0.87
PRKDC-203ENST00000432581 USP17L23D6RBM5 183 aa9.62□□□□□ -0.87
PRKDC-203ENST00000432581 LTAP01374 205 aa9.62□□□□□ -0.87
PRKDC-203ENST00000432581 MIAQ16674 131 aa9.62□□□□□ -0.87
PRKDC-203ENST00000432581 MPV17L2Q567V2 206 aa9.62□□□□□ -0.87
PRKDC-203ENST00000432581 AKR1C8PQ5T2L2 129 aa9.62□□□□□ -0.87
PRKDC-203ENST00000432581 PTTG1O95997 202 aa9.61□□□□□ -0.87
PRKDC-203ENST00000432581 HLA-DQA1P01909 254 aa9.61□□□□□ -0.87
PRKDC-203ENST00000432581 FHITP49789 147 aa9.61□□□□□ -0.87
PRKDC-203ENST00000432581 ZNF56Q15929 161 aa9.61□□□□□ -0.87
PRKDC-203ENST00000432581 PRR27Q6MZM9 219 aa9.61□□□□□ -0.87
PRKDC-203ENST00000432581 NEXN-AS1Q8NBZ9 246 aa9.61□□□□□ -0.87
PRKDC-203ENST00000432581 CHCHD5Q9BSY4 110 aa9.61□□□□□ -0.87
PRKDC-203ENST00000432581 PRSS1P07477 247 aa9.6□□□□□ -0.87
PRKDC-203ENST00000432581 GIPP09681 153 aaPredicted RBP9.6□□□□□ -0.87
PRKDC-203ENST00000432581 TMEM97Q5BJF2 176 aa9.6□□□□□ -0.87
PRKDC-203ENST00000432581 Q5BKY6 102 aa9.6□□□□□ -0.87
PRKDC-203ENST00000432581 C9orf163Q8N9P6 203 aa9.6□□□□□ -0.87
PRKDC-203ENST00000432581 MAP1LC3B2A6NCE7 125 aa9.59□□□□□ -0.87
PRKDC-203ENST00000432581 RPL19P84098 196 aaKnown RBP9.59□□□□□ -0.87
PRKDC-203ENST00000432581 DAZAP1Q96EP5 407 aaKnown RBP9.59□□□□□ -0.87
PRKDC-203ENST00000432581 ZNF471Q9BX82 626 aaPredicted RBP9.59□□□□□ -0.87
PRKDC-203ENST00000432581 MAP1LC3BQ9GZQ8 125 aa9.59□□□□□ -0.87
PRKDC-203ENST00000432581 FXYD6-FXYD2A0A087WZ82 144 aa9.58□□□□□ -0.88
PRKDC-203ENST00000432581 CXCL1P09341 107 aa9.58□□□□□ -0.88
PRKDC-203ENST00000432581 AKR1C3P42330 323 aa9.58□□□□□ -0.88
PRKDC-203ENST00000432581 HNRNPA3P51991 378 aaKnown RBP9.58□□□□□ -0.88
PRKDC-203ENST00000432581 CST9LP1Q5W188 147 aa9.58□□□□□ -0.88
PRKDC-203ENST00000432581 OR10AG1Q8NH19 301 aa9.58□□□□□ -0.88
PRKDC-203ENST00000432581 STOML3Q8TAV4 291 aa9.58□□□□□ -0.88
PRKDC-203ENST00000432581 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
PRKDC-203ENST00000432581 VAX2Q9UIW0 290 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms