RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 NUDT3O95989 172 aa9.51□□□□□ -0.89
DDX56-204ENST00000431640 IGKV3-20P01619 116 aa9.51□□□□□ -0.89
DDX56-204ENST00000431640 DEFB136Q30KP8 78 aa9.51□□□□□ -0.89
DDX56-204ENST00000431640 LINC01006Q8NI28 216 aa9.51□□□□□ -0.89
DDX56-204ENST00000431640 DYNLRB2Q8TF09 96 aa9.51□□□□□ -0.89
DDX56-204ENST00000431640 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
DDX56-204ENST00000431640 ZMAT4Q9H898 229 aa9.51□□□□□ -0.89
DDX56-204ENST00000431640 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 SPINK13Q1W4C9 94 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 AMTNQ6UX39 209 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 C12orf54Q6X4T0 127 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.5□□□□□ -0.89
DDX56-204ENST00000431640 DLX4Q92988 240 aaPredicted RBP9.5□□□□□ -0.89
DDX56-204ENST00000431640 C16orf95Q9H693 158 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 TRAV12-2A0A075B6T6 113 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.5□□□□□ -0.89
DDX56-204ENST00000431640 NDUFA7O95182 113 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 HLA-DRB4P13762 266 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 HINT1P49773 126 aaPredicted RBP9.5□□□□□ -0.89
DDX56-204ENST00000431640 LINC00315P59091 139 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 DEFB131AP59861 70 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 ODF1Q14990 250 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 DEFB114Q30KQ6 69 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
DDX56-204ENST00000431640 SIVA1O15304 175 aa9.49□□□□□ -0.89
DDX56-204ENST00000431640 DLEU1O43261 78 aa9.49□□□□□ -0.89
DDX56-204ENST00000431640 SPRY2O43597 315 aa9.49□□□□□ -0.89
DDX56-204ENST00000431640 KRTAP10-3P60369 221 aa9.49□□□□□ -0.89
DDX56-204ENST00000431640 Q8N1Y9 231 aa9.49□□□□□ -0.89
DDX56-204ENST00000431640 STPG4Q8N801 248 aa9.49□□□□□ -0.89
DDX56-204ENST00000431640 TOMM6Q96B49 74 aa9.49□□□□□ -0.89
DDX56-204ENST00000431640 DKK2Q9UBU2 259 aa9.49□□□□□ -0.89
DDX56-204ENST00000431640 JMJD1CQ15652 2540 aa9.49□□□□□ -0.89
DDX56-204ENST00000431640 TENM1Q9UKZ4 2725 aa9.48□□□□□ -0.89
DDX56-204ENST00000431640 SETD2Q9BYW2 2564 aaPredicted RBP9.48□□□□□ -0.89
DDX56-204ENST00000431640 TRAV12-1A0A0B4J245 112 aa9.48□□□□□ -0.89
DDX56-204ENST00000431640 H3BMM0 161 aa9.48□□□□□ -0.89
DDX56-204ENST00000431640 VCYO14598 125 aa9.48□□□□□ -0.89
DDX56-204ENST00000431640 DPM2O94777 84 aa9.48□□□□□ -0.89
DDX56-204ENST00000431640 IGKCP01834 107 aa9.48□□□□□ -0.89
DDX56-204ENST00000431640 PROK1P58294 105 aa9.48□□□□□ -0.89
DDX56-204ENST00000431640 TMEM61Q8N0U2 210 aa9.48□□□□□ -0.89
DDX56-204ENST00000431640 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
DDX56-204ENST00000431640 SPAG8Q99932 426 aaPredicted RBP9.48□□□□□ -0.89
DDX56-204ENST00000431640 F5H697 171 aa9.47□□□□□ -0.89
DDX56-204ENST00000431640 KRTAP24-1Q3LI83 254 aa9.47□□□□□ -0.89
DDX56-204ENST00000431640 ANKRD39Q53RE8 183 aa9.47□□□□□ -0.89
DDX56-204ENST00000431640 BOD1L2Q8IYS8 172 aa9.47□□□□□ -0.89
DDX56-204ENST00000431640 CLUHP3Q96NS8 147 aa9.47□□□□□ -0.89
DDX56-204ENST00000431640 SCGB3A1Q96QR1 104 aa9.47□□□□□ -0.89
DDX56-204ENST00000431640 CSTL1Q9H114 145 aa9.47□□□□□ -0.89
DDX56-204ENST00000431640 MDFICQ9P1T7 246 aa9.47□□□□□ -0.89
DDX56-204ENST00000431640 A0A087WX48 190 aa9.46□□□□□ -0.89
DDX56-204ENST00000431640 TRBV6-5A0A0K0K1A5 114 aa9.46□□□□□ -0.89
DDX56-204ENST00000431640 KNCNA6PVL3 124 aa9.46□□□□□ -0.89
DDX56-204ENST00000431640 TSSC4Q9Y5U2 329 aaPredicted RBP9.46□□□□□ -0.89
DDX56-204ENST00000431640 CBY3A6NI87 242 aa9.46□□□□□ -0.9
DDX56-204ENST00000431640 ZNF25P17030 456 aaPredicted RBP9.46□□□□□ -0.9
DDX56-204ENST00000431640 POLR2KP53803 58 aaKnown RBP9.46□□□□□ -0.9
DDX56-204ENST00000431640 CMC4P56277 68 aaPredicted RBP9.46□□□□□ -0.9
DDX56-204ENST00000431640 GAGE1Q13065 139 aa9.46□□□□□ -0.9
DDX56-204ENST00000431640 FHL3Q13643 280 aa9.46□□□□□ -0.9
DDX56-204ENST00000431640 SUMO4Q6EEV6 95 aa9.46□□□□□ -0.9
DDX56-204ENST00000431640 RAX2Q96IS3 184 aa9.46□□□□□ -0.9
DDX56-204ENST00000431640 DUX3Q96PT4 197 aa9.46□□□□□ -0.9
DDX56-204ENST00000431640 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.9
DDX56-204ENST00000431640 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
DDX56-204ENST00000431640 MUC4Q99102 2169 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 H7C1H1 209 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 CCL24O00175 119 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 CD28P10747 220 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 PLNP26678 52 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 MPV17L2Q567V2 206 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 C2orf66Q6UXQ4 117 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 ERASQ7Z444 233 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 C11orf44Q8N8P7 122 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 PTH2Q96A98 100 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 KIR2DL4Q99706 377 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
DDX56-204ENST00000431640 A0A087WWL8 130 aa9.44□□□□□ -0.9
DDX56-204ENST00000431640 CRYGDP07320 174 aa9.44□□□□□ -0.9
DDX56-204ENST00000431640 FGF6P10767 208 aa9.44□□□□□ -0.9
DDX56-204ENST00000431640 CD300EQ496F6 205 aaPredicted RBP9.44□□□□□ -0.9
DDX56-204ENST00000431640 ZNF876PQ49A33 203 aa9.44□□□□□ -0.9
DDX56-204ENST00000431640 BVES-AS1Q5T3Y7 98 aa9.44□□□□□ -0.9
DDX56-204ENST00000431640 TRPT1Q86TN4 253 aaKnown RBP9.44□□□□□ -0.9
DDX56-204ENST00000431640 JPT2Q9H910 190 aa9.44□□□□□ -0.9
DDX56-204ENST00000431640 ZNF256Q9Y2P7 627 aaPredicted RBP9.44□□□□□ -0.9
DDX56-204ENST00000431640 CYSLTR1Q9Y271 337 aa9.43□□□□□ -0.9
DDX56-204ENST00000431640 ATRQ13535 2644 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 TRBV27A0A0K0K1C4 114 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 ADARB2-AS1A8MUL3 147 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 F8VRH5 84 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 NMUP48645 174 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 ZNF56Q15929 161 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 FAM74A4Q5TZK3 123 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 C2orf91Q6ZV80 131 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 NEXN-AS1Q8NBZ9 246 aa9.42□□□□□ -0.9
DDX56-204ENST00000431640 ORAOV1Q8WV07 137 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms