RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 IAH1Q2TAA2 248 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 IBA57Q5T440 356 aaKnown RBP1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 UNQ5815/PRO19632Q6UWF5 114 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 FAM223AQ8IWN6 122 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 C12orf45Q8N5I9 185 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 Q8N6K4 173 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 MRPL30Q8TCC3 161 aaKnown RBP1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 SLAMF6Q96DU3 332 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 CEP19Q96LK0 163 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 Q96M85 177 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 NIPSNAP1Q9BPW8 284 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 C20orf27Q9GZN8 174 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 WDR61Q9GZS3 305 aaKnown RBP1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 TP73-AS1Q9UF72 201 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 CRCT1Q9UGL9 99 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 PKIGQ9Y2B9 76 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 RNF213Q63HN8 5207 aa1.16□□□□□ -2.22
HMGB1P27-201ENST00000431429 HSPG2P98160 4391 aa1.15□□□□□ -2.22
HMGB1P27-201ENST00000431429 MEIKINA0A087WXM9 373 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 ODAMA1E959 279 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 C2orf70A6NJV1 201 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 H7C1C5 153 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 J3QQQ9 107 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 DEGS1O15121 323 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 DEFB4AO15263 64 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 PGLYRP1O75594 196 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 DHFRP00374 187 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 IGHV3-7P01780 117 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 TFF1P04155 84 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF705DP0CH99 300 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 DEFA4P12838 97 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 GPX2P18283 190 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 HINT1P49773 126 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF80P51504 273 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 RPS20P60866 119 aaKnown RBP1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 LCN6P62502 163 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 ERHP84090 104 aaKnown RBP1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 KRR1Q13601 381 aaKnown RBP1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 KISS1Q15726 138 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 TDRG1Q3Y452 100 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 LINC00311Q8N616 119 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 PFN4Q8NHR9 129 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 AMELYQ99218 206 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 WFDC10AQ9H1F0 79 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 DCSTAMPQ9H295 470 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 TMEM14BQ9NUH8 114 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 IDI2-AS1Q9NZ38 188 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 UFC1Q9Y3C8 167 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 SAMHD1Q9Y3Z3 626 aaKnown RBP1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 IER3IP1Q9Y5U9 82 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 TANC2Q9HCD6 1990 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 TNCP24821 2201 aa1.15□□□□□ -2.23
HMGB1P27-201ENST00000431429 TRAV27A0A087WT01 109 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 TRBV7-1A0A0A6YYK4 115 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 TRAV26-2A0A0B4J265 109 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 A0A1B0GVG6 124 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 SDCBPO00560 298 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 CYB5BO43169 146 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 ORC5O43913 435 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 CREBL2O60519 120 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 NDUFA3O95167 84 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 RBP2P50120 134 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 GNG10P50151 68 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 POLR2JP52435 117 aaKnown RBP1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF137PP52743 207 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 SMIM11AP58511 58 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 AP3S2P59780 193 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 HIST1H4AP62805 103 aaKnown RBP1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 FXYD3Q14802 87 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 SPCS2Q15005 226 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 CDK5R1Q15078 307 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 C12orf74Q32Q52 190 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 RPL13AP3Q6NVV1 102 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF705AQ6ZN79 300 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 STX19Q8N4C7 294 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 THEM6Q8WUY1 208 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 DYDC1Q8WWB3 177 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 ARL11Q969Q4 196 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 PPP1R14BQ96C90 147 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 BORCS8Q96FH0 119 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 GPX7Q96SL4 187 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 DERL1Q9BUN8 251 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 COA4Q9NYJ1 87 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 NAT8Q9UHE5 227 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 FAM32AQ9Y421 112 aaKnown RBP1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 TIMM9Q9Y5J7 89 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 DNAH10Q8IVF4 4471 aa1.14□□□□□ -2.23
HMGB1P27-201ENST00000431429 TRBV10-2A0A0K0K1G8 114 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 FAM236DA0A1B0GTK5 79 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 OR2T8A6NH00 312 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 FABP5P3A8MUU1 101 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 ZNF736B4DX44 427 aaPredicted RBP1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 SULT1B1O43704 296 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 SULT1C4O75897 302 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 OR2H2O95918 312 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 IFNGP01579 166 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 IGKV1-16P04430 117 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 RPSAP08865 295 aaKnown RBP1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 SULT1A3P0DMM9 295 aa1.13□□□□□ -2.23
HMGB1P27-201ENST00000431429 SULT1A4P0DMN0 295 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms