RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 SLC25A16P16260 332 aa13.8□□□□□ -0.2
CHD1L-204ENST00000431239 K7EMT4 169 aa13.8□□□□□ -0.2
CHD1L-204ENST00000431239 TRBV7-9A0A0J9YWB2 115 aa13.79□□□□□ -0.2
CHD1L-204ENST00000431239 LINC01356Q8N9X3 169 aa13.79□□□□□ -0.2
CHD1L-204ENST00000431239 TM2D2Q9BX73 214 aa13.79□□□□□ -0.2
CHD1L-204ENST00000431239 CYSLTR1Q9Y271 337 aa13.79□□□□□ -0.2
CHD1L-204ENST00000431239 ZNF256Q9Y2P7 627 aaPredicted RBP13.79□□□□□ -0.2
CHD1L-204ENST00000431239 NXPH4O95158 308 aa13.78□□□□□ -0.2
CHD1L-204ENST00000431239 SONP18583 2426 aaKnown RBP13.78□□□□□ -0.2
CHD1L-204ENST00000431239 PHLDA1Q8WV24 401 aaPredicted RBP13.78□□□□□ -0.2
CHD1L-204ENST00000431239 PRADC1Q9BSG0 188 aa13.78□□□□□ -0.2
CHD1L-204ENST00000431239 HTN1P15515 57 aa13.78□□□□□ -0.2
CHD1L-204ENST00000431239 SNRPD3P62318 126 aaKnown RBP13.78□□□□□ -0.2
CHD1L-204ENST00000431239 CD300EQ496F6 205 aaPredicted RBP13.78□□□□□ -0.2
CHD1L-204ENST00000431239 Q8N1Y9 231 aa13.78□□□□□ -0.2
CHD1L-204ENST00000431239 IGHV4OR15-8A0A075B7B6 117 aa13.77□□□□□ -0.2
CHD1L-204ENST00000431239 A0A087WW49 117 aa13.77□□□□□ -0.2
CHD1L-204ENST00000431239 MYMXA0A1B0GTQ4 84 aa13.77□□□□□ -0.2
CHD1L-204ENST00000431239 K7ERU9 68 aa13.77□□□□□ -0.2
CHD1L-204ENST00000431239 SCGB2A2Q13296 93 aa13.77□□□□□ -0.2
CHD1L-204ENST00000431239 ZNF56Q15929 161 aa13.77□□□□□ -0.2
CHD1L-204ENST00000431239 SDHAF1A6NFY7 115 aa13.77□□□□□ -0.21
CHD1L-204ENST00000431239 A0A0J9YX75 114 aa13.77□□□□□ -0.21
CHD1L-204ENST00000431239 TSHBP01222 138 aa13.77□□□□□ -0.21
CHD1L-204ENST00000431239 DEFB136Q30KP8 78 aa13.77□□□□□ -0.21
CHD1L-204ENST00000431239 HIST2H2BDQ6DRA6 164 aa13.77□□□□□ -0.21
CHD1L-204ENST00000431239 ZFP2Q6ZN57 461 aa13.77□□□□□ -0.21
CHD1L-204ENST00000431239 BEX4Q9NWD9 120 aaPredicted RBP13.76□□□□□ -0.21
CHD1L-204ENST00000431239 EPG5Q9HCE0 2579 aa13.76□□□□□ -0.21
CHD1L-204ENST00000431239 PPP1R17O96001 155 aa13.76□□□□□ -0.21
CHD1L-204ENST00000431239 KLHL30-AS1Q8NEE0 82 aa13.76□□□□□ -0.21
CHD1L-204ENST00000431239 CRYGDP07320 174 aa13.75□□□□□ -0.21
CHD1L-204ENST00000431239 GATA3P23771 443 aa13.75□□□□□ -0.21
CHD1L-204ENST00000431239 IGHV3-16A0A0C4DH30 117 aa13.75□□□□□ -0.21
CHD1L-204ENST00000431239 ZNF815PA8K554 130 aa13.75□□□□□ -0.21
CHD1L-204ENST00000431239 KIR2DL4Q99706 377 aa13.75□□□□□ -0.21
CHD1L-204ENST00000431239 C11orf86A6NJI1 115 aa13.74□□□□□ -0.21
CHD1L-204ENST00000431239 LGALS1P09382 135 aaKnown RBP13.74□□□□□ -0.21
CHD1L-204ENST00000431239 HOXD3P31249 432 aaPredicted RBP13.74□□□□□ -0.21
CHD1L-204ENST00000431239 C12orf74Q32Q52 190 aa13.74□□□□□ -0.21
CHD1L-204ENST00000431239 OR5A1Q8NGJ0 315 aa13.74□□□□□ -0.21
CHD1L-204ENST00000431239 SETD2Q9BYW2 2564 aaPredicted RBP13.74□□□□□ -0.21
CHD1L-204ENST00000431239 K7EQG2 157 aa13.74□□□□□ -0.21
CHD1L-204ENST00000431239 SCGB1D4Q6XE38 83 aa13.74□□□□□ -0.21
CHD1L-204ENST00000431239 POLR2KP53803 58 aaKnown RBP13.74□□□□□ -0.21
CHD1L-204ENST00000431239 C18orf65Q6ZTR6 163 aa13.74□□□□□ -0.21
CHD1L-204ENST00000431239 PLEKHB2Q96CS7 222 aa13.74□□□□□ -0.21
CHD1L-204ENST00000431239 RIPPLY3P57055 190 aa13.73□□□□□ -0.21
CHD1L-204ENST00000431239 MTURNQ8N3F0 131 aa13.73□□□□□ -0.21
CHD1L-204ENST00000431239 POM121L12Q8N7R1 296 aa13.73□□□□□ -0.21
CHD1L-204ENST00000431239 TRBV7-3A0A075B6L6 115 aa13.73□□□□□ -0.21
CHD1L-204ENST00000431239 IGLL5B9A064 214 aa13.73□□□□□ -0.21
CHD1L-204ENST00000431239 ZNF479Q96JC4 524 aa13.73□□□□□ -0.21
CHD1L-204ENST00000431239 OPRPNQ99935 248 aaPredicted RBP13.73□□□□□ -0.21
CHD1L-204ENST00000431239 ZNF469Q96JG9 3925 aaPredicted RBP13.72□□□□□ -0.21
CHD1L-204ENST00000431239 NF1P21359 2839 aa13.72□□□□□ -0.21
CHD1L-204ENST00000431239 E9PLD3 99 aa13.72□□□□□ -0.21
CHD1L-204ENST00000431239 DSCR9P59020 149 aa13.72□□□□□ -0.21
CHD1L-204ENST00000431239 VPREB3Q9UKI3 123 aa13.72□□□□□ -0.21
CHD1L-204ENST00000431239 VCYO14598 125 aa13.72□□□□□ -0.21
CHD1L-204ENST00000431239 PRM2P04554 102 aa13.72□□□□□ -0.21
CHD1L-204ENST00000431239 AMTNQ6UX39 209 aa13.72□□□□□ -0.21
CHD1L-204ENST00000431239 DUX3Q96PT4 197 aa13.72□□□□□ -0.21
CHD1L-204ENST00000431239 CHD6Q8TD26 2715 aa13.71□□□□□ -0.21
CHD1L-204ENST00000431239 IGLV4-69A0A075B6H9 119 aa13.71□□□□□ -0.21
CHD1L-204ENST00000431239 A0A096LNT2 108 aa13.71□□□□□ -0.21
CHD1L-204ENST00000431239 IGIPA6NJ69 53 aa13.71□□□□□ -0.21
CHD1L-204ENST00000431239 HOXA3O43365 443 aaPredicted RBP13.71□□□□□ -0.21
CHD1L-204ENST00000431239 RPL24P83731 157 aaKnown RBP13.71□□□□□ -0.21
CHD1L-204ENST00000431239 C9orf85Q96MD7 179 aa13.71□□□□□ -0.21
CHD1L-204ENST00000431239 WNK1Q9H4A3 2382 aa13.71□□□□□ -0.21
CHD1L-204ENST00000431239 IGHV1OR15-1A0A075B7D0 117 aa13.71□□□□□ -0.21
CHD1L-204ENST00000431239 KNCNA6PVL3 124 aa13.71□□□□□ -0.21
CHD1L-204ENST00000431239 SAMD13Q5VXD3 122 aa13.71□□□□□ -0.21
CHD1L-204ENST00000431239 IGHV3-73A0A0B4J1V6 119 aa13.7□□□□□ -0.22
CHD1L-204ENST00000431239 MORN3Q6PF18 240 aaPredicted RBP13.7□□□□□ -0.22
CHD1L-204ENST00000431239 SLURP1P55000 103 aa13.7□□□□□ -0.22
CHD1L-204ENST00000431239 ZNF876PQ49A33 203 aa13.7□□□□□ -0.22
CHD1L-204ENST00000431239 TMEM170BQ5T4T1 132 aa13.7□□□□□ -0.22
CHD1L-204ENST00000431239 ZNF580Q9UK33 172 aa13.7□□□□□ -0.22
CHD1L-204ENST00000431239 TAL2Q16559 108 aa13.7□□□□□ -0.22
CHD1L-204ENST00000431239 SFTA2Q6UW10 78 aa13.7□□□□□ -0.22
CHD1L-204ENST00000431239 ZNF702PQ9H963 129 aa13.7□□□□□ -0.22
CHD1L-204ENST00000431239 NOTCH3Q9UM47 2321 aa13.69□□□□□ -0.22
CHD1L-204ENST00000431239 CCDC168Q8NDH2 2452 aa13.69□□□□□ -0.22
CHD1L-204ENST00000431239 TCTEX1D4Q5JR98 221 aa13.69□□□□□ -0.22
CHD1L-204ENST00000431239 SYT8Q8NBV8 401 aa13.69□□□□□ -0.22
CHD1L-204ENST00000431239 H3BMG7 143 aa13.69□□□□□ -0.22
CHD1L-204ENST00000431239 KRTAP10-9P60411 292 aa13.69□□□□□ -0.22
CHD1L-204ENST00000431239 PMVKQ15126 192 aa13.69□□□□□ -0.22
CHD1L-204ENST00000431239 M0QY20 66 aa13.68□□□□□ -0.22
CHD1L-204ENST00000431239 LGALS9O00182 355 aa13.68□□□□□ -0.22
CHD1L-204ENST00000431239 SRSF9Q13242 221 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHD1L-204ENST00000431239 KHDC1LQ5JSQ8 128 aa13.68□□□□□ -0.22
CHD1L-204ENST00000431239 UBR5O95071 2799 aaPredicted RBP13.68□□□□□ -0.22
CHD1L-204ENST00000431239 RBMY1A1P0DJD3 496 aaKnown RBP13.67□□□□□ -0.22
CHD1L-204ENST00000431239 RBMY1CP0DJD4 496 aa13.67□□□□□ -0.22
CHD1L-204ENST00000431239 RBMY1FQ15415 496 aaKnown RBP13.67□□□□□ -0.22
CHD1L-204ENST00000431239 TRBV27A0A0K0K1C4 114 aa13.67□□□□□ -0.22
CHD1L-204ENST00000431239 COX6B1P14854 86 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms