RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 SLC50A1Q9BRV3 221 aa6.71□□□□□ -1.34
CDC42BPA-206ENST00000429440 LEPROTO15243 131 aa6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 TRGV3P03979 118 aa6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 INAFM2P0DMQ5 153 aa6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 MRPS36P82909 103 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 CLEC2BQ92478 149 aa6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 CACNA1GO43497 2377 aa6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 ARFGEF3Q5TH69 2177 aa6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 TRAV8-3A0A0A6YYJ7 113 aa6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 EP300Q09472 2414 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 FHL2Q14192 279 aa6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 C9orf139Q6ZV77 190 aa6.7□□□□□ -1.34
CDC42BPA-206ENST00000429440 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 I3L3M4 83 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 AVPP01185 164 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 VMA21Q3ZAQ7 101 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 Q6JHZ5 121 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 ZNF833PQ6ZTB9 187 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 TMEM141Q96I45 108 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 C16orf92Q96LL3 132 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 DEFB127Q9H1M4 99 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 LINC00574Q9H8X3 128 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGKV1D-17A0A075B6S4 117 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 TRGV5A0A0B4J1U4 118 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 TRAV26-2A0A0B4J265 109 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 C10orf55Q5SWW7 151 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 LINC01561Q8N1V8 128 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
CDC42BPA-206ENST00000429440 FAM222AQ5U5X8 452 aa6.68□□□□□ -1.34
CDC42BPA-206ENST00000429440 ZGRF1Q86YA3 2104 aa6.68□□□□□ -1.34
CDC42BPA-206ENST00000429440 ZNF876PQ49A33 203 aa6.68□□□□□ -1.34
CDC42BPA-206ENST00000429440 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
CDC42BPA-206ENST00000429440 BSNQ9UPA5 3926 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGKV2-40A0A087WW87 121 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGIPA6NJ69 53 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 SRRM5B3KS81 715 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 M0R381 172 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 TSHBP01222 138 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGKV2D-40P01614 121 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 PRSS2P07478 247 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 NBL1P41271 181 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 APRG1Q8IVJ8 170 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 SLC25A15Q9Y619 301 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 MGAQ8IWI9 3026 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 ZNF292O60281 2723 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 CNOT1A5YKK6 2376 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGHV3OR16-10A0A075B7F0 116 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 PPP1R17O96001 155 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 TIRAPP58753 221 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 DAZ2Q13117 558 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 CDSNQ15517 529 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 HCP5Q6MZN7 132 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 FP248Q71RG6 208 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 DAZ4Q86SG3 579 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 WFDC11Q8NEX6 87 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 TIMM17AQ99595 171 aa6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 DAZ1Q9NQZ3 744 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 DAZ3Q9NR90 486 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-206ENST00000429440 SMG1Q96Q15 3661 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-206ENST00000429440 ZNF318Q5VUA4 2279 aa6.66□□□□□ -1.34
CDC42BPA-206ENST00000429440 A0A0J9YXY3 114 aa6.66□□□□□ -1.34
CDC42BPA-206ENST00000429440 KNCNA6PVL3 124 aa6.66□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGKV1-17P01599 117 aa6.66□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGHG2P01859 326 aa6.66□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGHV1-2P23083 117 aa6.66□□□□□ -1.34
CDC42BPA-206ENST00000429440 DYNAPQ8N1N2 210 aa6.66□□□□□ -1.34
CDC42BPA-206ENST00000429440 PRRC2AP48634 2157 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGHV7-4-1A0A0J9YVY3 117 aa6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 A0A1W2PRX2 142 aa6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 IGLV2-23P01705 113 aa6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 FAM19A1Q7Z5A9 133 aa6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 TMEM61Q8N0U2 210 aa6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 Q8TAT8 98 aa6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 BRK1Q8WUW1 75 aa6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 LITAFQ99732 161 aa6.65□□□□□ -1.34
CDC42BPA-206ENST00000429440 AKAP13Q12802 2813 aa6.65□□□□□ -1.35
CDC42BPA-206ENST00000429440 PLXNB1O43157 2135 aa6.65□□□□□ -1.35
CDC42BPA-206ENST00000429440 IGKV3D-20A0A0C4DH25 116 aa6.65□□□□□ -1.35
CDC42BPA-206ENST00000429440 ZNRF1Q8ND25 227 aa6.65□□□□□ -1.35
CDC42BPA-206ENST00000429440 DSCAMO60469 2012 aa6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 A0A0U1RQV1 116 aa6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 SPANXN1Q5VSR9 72 aa6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 RNF182Q8N6D2 247 aa6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 NACAE9PAV3 2078 aa6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 RNF223E7ERA6 249 aa6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 PRB4P10163 310 aaPredicted RBP6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 FAM223AQ8IWN6 122 aa6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 FDCSPQ8NFU4 85 aa6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
CDC42BPA-206ENST00000429440 ATMQ13315 3056 aa6.63□□□□□ -1.35
CDC42BPA-206ENST00000429440 IGHV3-21A0A0B4J1V1 117 aa6.63□□□□□ -1.35
CDC42BPA-206ENST00000429440 FAM223BA6NKX1 122 aa6.63□□□□□ -1.35
CDC42BPA-206ENST00000429440 I3L2K1 104 aa6.63□□□□□ -1.35
CDC42BPA-206ENST00000429440 COX7A2LO14548 114 aa6.63□□□□□ -1.35
CDC42BPA-206ENST00000429440 LYZL6O75951 148 aa6.63□□□□□ -1.35
CDC42BPA-206ENST00000429440 MRGPRG-AS1Q2M3A8 158 aa6.63□□□□□ -1.35
CDC42BPA-206ENST00000429440 IGFL2Q6UWQ7 119 aa6.63□□□□□ -1.35
CDC42BPA-206ENST00000429440 BAALC-AS2P0C853 105 aa6.62□□□□□ -1.35
CDC42BPA-206ENST00000429440 RPL27AP46776 148 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms