RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 BLCAPP62952 87 aa12.12□□□□□ -0.47
C4A-243ENST00000428956 SIRPDQ9H106 197 aa12.12□□□□□ -0.47
C4A-243ENST00000428956 FSTL3O95633 263 aa12.12□□□□□ -0.47
C4A-243ENST00000428956 COX7B2Q8TF08 81 aa12.12□□□□□ -0.47
C4A-243ENST00000428956 DOCK10Q96BY6 2186 aa12.12□□□□□ -0.47
C4A-243ENST00000428956 SLURP1P55000 103 aa12.11□□□□□ -0.47
C4A-243ENST00000428956 TRAV4A0A0B4J268 109 aa12.11□□□□□ -0.47
C4A-243ENST00000428956 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
C4A-243ENST00000428956 EIF4EBP1Q13541 118 aaPredicted RBP12.11□□□□□ -0.47
C4A-243ENST00000428956 CRIP3Q6Q6R5 217 aa12.11□□□□□ -0.47
C4A-243ENST00000428956 TRBV7-3A0A075B6L6 115 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 IGHV4-30-2A0A087WSY4 118 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 MRPL23Q16540 153 aaKnown RBP12.1□□□□□ -0.47
C4A-243ENST00000428956 DEFB113Q30KQ7 82 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 C9orf66Q5T8R8 295 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 SPRY2O43597 315 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 MSMPQ1L6U9 139 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 ADORA2A-AS1P86434 159 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 FOXI1Q12951 378 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 MLST8Q9BVC4 326 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 BRWD1-AS2P59051 145 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 RNASE8Q8TDE3 154 aaKnown RBP12.1□□□□□ -0.47
C4A-243ENST00000428956 FRMD6-AS1P0C7T7 363 aa12.1□□□□□ -0.47
C4A-243ENST00000428956 CXCL5P42830 114 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 CACNA1GO43497 2377 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 ATOX1O00244 68 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 COX7A2LO14548 114 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 Q6ZPA2 131 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 C5orf38Q86SI9 138 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 APRG1Q8IVJ8 170 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 PROP1O75360 226 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 RPL39P62891 51 aaKnown RBP12.09□□□□□ -0.47
C4A-243ENST00000428956 WFDC2Q14508 124 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 VSIG2Q96IQ7 327 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 MED13Q9UHV7 2174 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 DENND4AQ7Z401 1863 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 C20orf203Q8NBC4 194 aa12.09□□□□□ -0.47
C4A-243ENST00000428956 A0A1W2PNU3 283 aaPredicted RBP12.08□□□□□ -0.47
C4A-243ENST00000428956 ODF3Q96PU9 254 aa12.08□□□□□ -0.47
C4A-243ENST00000428956 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
C4A-243ENST00000428956 MBD6Q96DN6 1003 aa12.08□□□□□ -0.48
C4A-243ENST00000428956 OPRPNQ99935 248 aaPredicted RBP12.08□□□□□ -0.48
C4A-243ENST00000428956 A0A096LPF7 62 aa12.08□□□□□ -0.48
C4A-243ENST00000428956 TMEM258P61165 79 aa12.08□□□□□ -0.48
C4A-243ENST00000428956 IGHV1-58A0A0C4DH39 117 aa12.08□□□□□ -0.48
C4A-243ENST00000428956 CLPSL2Q6UWE3 100 aa12.08□□□□□ -0.48
C4A-243ENST00000428956 IGHV4OR15-8A0A075B7B6 117 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 A0A087WW49 117 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 ATP5G1P05496 136 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 KIF26AQ9ULI4 1882 aaPredicted RBP12.07□□□□□ -0.48
C4A-243ENST00000428956 G3V4G9 280 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 JMJD7-PLA2G4BH0Y9G9 81 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 ZFP36P26651 326 aaKnown RBP12.07□□□□□ -0.48
C4A-243ENST00000428956 ODF3BA8MYP8 253 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 IGLC6P0CF74 106 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 GYPEP15421 78 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 OBSL1O75147 1896 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 LTBP2Q14767 1821 aa12.07□□□□□ -0.48
C4A-243ENST00000428956 A0A0J9YX75 114 aa12.06□□□□□ -0.48
C4A-243ENST00000428956 TRBV10-1A0A0K0K1A3 114 aa12.06□□□□□ -0.48
C4A-243ENST00000428956 YPEL4Q96NS1 127 aa12.06□□□□□ -0.48
C4A-243ENST00000428956 C1orf43Q9BWL3 253 aa12.06□□□□□ -0.48
C4A-243ENST00000428956 SPART-AS1P0CW21 52 aa12.06□□□□□ -0.48
C4A-243ENST00000428956 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
C4A-243ENST00000428956 B5MCH6 92 aa12.05□□□□□ -0.48
C4A-243ENST00000428956 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.48
C4A-243ENST00000428956 HIST2H2BCQ6DN03 193 aa12.05□□□□□ -0.48
C4A-243ENST00000428956 MDFICQ9P1T7 246 aa12.05□□□□□ -0.48
C4A-243ENST00000428956 NBASA2RRP1 2371 aa12.05□□□□□ -0.48
C4A-243ENST00000428956 A0A0J9YY99 117 aa12.05□□□□□ -0.48
C4A-243ENST00000428956 A6NDX4 124 aa12.05□□□□□ -0.48
C4A-243ENST00000428956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.05□□□□□ -0.485e-14■□□□□ 10.1
C4A-243ENST00000428956 Q6ZQT7 251 aa12.04□□□□□ -0.48
C4A-243ENST00000428956 C4orf3Q8WVX3 66 aa12.04□□□□□ -0.48
C4A-243ENST00000428956 PCNX1Q96RV3 2341 aa12.04□□□□□ -0.48
C4A-243ENST00000428956 LGALS9O00182 355 aa12.04□□□□□ -0.48
C4A-243ENST00000428956 TMEM131Q92545 1883 aa12.04□□□□□ -0.48
C4A-243ENST00000428956 IGKV2D-24A0A075B6R9 120 aa12.04□□□□□ -0.48
C4A-243ENST00000428956 COL4A4P53420 1690 aaPredicted RBP12.03□□□□□ -0.48
C4A-243ENST00000428956 PRORYQ9H606 182 aa12.03□□□□□ -0.48
C4A-243ENST00000428956 CAMK2N2Q96S95 79 aa12.03□□□□□ -0.48
C4A-243ENST00000428956 MYCNOSP40205 109 aa12.03□□□□□ -0.48
C4A-243ENST00000428956 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
C4A-243ENST00000428956 LINC00322Q6ZN03 302 aaPredicted RBP12.02□□□□□ -0.49
C4A-243ENST00000428956 GDF5OSQ5U4N7 250 aa12.02□□□□□ -0.49
C4A-243ENST00000428956 PCNX2A6NKB5 2137 aa12.02□□□□□ -0.49
C4A-243ENST00000428956 SMIM20Q8N5G0 67 aa12.02□□□□□ -0.49
C4A-243ENST00000428956 KIAA1549LQ6ZVL6 1849 aa12.02□□□□□ -0.49
C4A-243ENST00000428956 ETDCA0A1B0GVM5 59 aa12.01□□□□□ -0.49
C4A-243ENST00000428956 hADV29S1A0JD25 119 aa12.01□□□□□ -0.49
C4A-243ENST00000428956 CRYGBP07316 175 aa12.01□□□□□ -0.49
C4A-243ENST00000428956 CCDC140Q96MF4 163 aa12.01□□□□□ -0.49
C4A-243ENST00000428956 ZNF80P51504 273 aaPredicted RBP12.01□□□□□ -0.49
C4A-243ENST00000428956 ZGRF1Q86YA3 2104 aa12.01□□□□□ -0.49
C4A-243ENST00000428956 RBM3P98179 157 aaKnown RBP12□□□□□ -0.49
C4A-243ENST00000428956 IGHV3-30-3P0DP02 117 aa12□□□□□ -0.49
C4A-243ENST00000428956 MIAQ16674 131 aa12□□□□□ -0.49
C4A-243ENST00000428956 UNQ9165/PRO28630Q6UXU0 137 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms