RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TRAV8-3A0A0A6YYJ7 113 aa11.33□□□□□ -0.6
TRIM39-209ENST00000428728 FAM229AH3BQW9 127 aa11.33□□□□□ -0.6
TRIM39-209ENST00000428728 TPT1P13693 172 aaKnown RBP11.33□□□□□ -0.6
TRIM39-209ENST00000428728 AKR1C3P42330 323 aa11.33□□□□□ -0.6
TRIM39-209ENST00000428728 DNLZQ5SXM8 178 aa11.33□□□□□ -0.6
TRIM39-209ENST00000428728 CYTL1Q9NRR1 136 aa11.33□□□□□ -0.6
TRIM39-209ENST00000428728 FAM30AQ9NZY2 134 aa11.33□□□□□ -0.6
TRIM39-209ENST00000428728 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-209ENST00000428728 SMLR1H3BR10 107 aa11.32□□□□□ -0.6
TRIM39-209ENST00000428728 FHITP49789 147 aa11.32□□□□□ -0.6
TRIM39-209ENST00000428728 LINC01559Q495D7 138 aa11.32□□□□□ -0.6
TRIM39-209ENST00000428728 COX8CQ7Z4L0 72 aa11.32□□□□□ -0.6
TRIM39-209ENST00000428728 STOML3Q8TAV4 291 aa11.32□□□□□ -0.6
TRIM39-209ENST00000428728 URGCP-MRPS24S4R325 110 aa11.32□□□□□ -0.6
TRIM39-209ENST00000428728 FLG2Q5D862 2391 aaPredicted RBP11.31□□□□□ -0.6
TRIM39-209ENST00000428728 LTAP01374 205 aa11.31□□□□□ -0.6
TRIM39-209ENST00000428728 ZNF674Q2M3X9 581 aa11.31□□□□□ -0.6
TRIM39-209ENST00000428728 TOR2AQ5JU69 321 aa11.31□□□□□ -0.6
TRIM39-209ENST00000428728 SFRP2Q96HF1 295 aa11.31□□□□□ -0.6
TRIM39-209ENST00000428728 FAT1Q14517 4588 aa11.3□□□□□ -0.6
TRIM39-209ENST00000428728 A0A1B0GV50 99 aa11.3□□□□□ -0.6
TRIM39-209ENST00000428728 PAGE4O60829 102 aa11.3□□□□□ -0.6
TRIM39-209ENST00000428728 RGS21Q2M5E4 152 aa11.3□□□□□ -0.6
TRIM39-209ENST00000428728 ZFP82Q8N141 532 aa11.3□□□□□ -0.6
TRIM39-209ENST00000428728 DNAJC30Q96LL9 226 aa11.3□□□□□ -0.6
TRIM39-209ENST00000428728 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
TRIM39-209ENST00000428728 TRBV6-1A0A0K0K1D8 114 aa11.29□□□□□ -0.6
TRIM39-209ENST00000428728 NIT1Q86X76 327 aa11.29□□□□□ -0.6
TRIM39-209ENST00000428728 BAALCQ8WXS3 180 aa11.29□□□□□ -0.6
TRIM39-209ENST00000428728 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
TRIM39-209ENST00000428728 IGKV2D-24A0A075B6R9 120 aa11.28□□□□□ -0.6
TRIM39-209ENST00000428728 RPL19P84098 196 aaKnown RBP11.28□□□□□ -0.6
TRIM39-209ENST00000428728 FAM213BQ8TBF2 198 aa11.28□□□□□ -0.6
TRIM39-209ENST00000428728 KLK12Q9UKR0 248 aa11.28□□□□□ -0.6
TRIM39-209ENST00000428728 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
TRIM39-209ENST00000428728 RPL36AP83881 106 aaKnown RBP11.27□□□□□ -0.61
TRIM39-209ENST00000428728 LINC01620Q4KN68 170 aa11.27□□□□□ -0.61
TRIM39-209ENST00000428728 RPL36ALQ969Q0 106 aaKnown RBP11.27□□□□□ -0.61
TRIM39-209ENST00000428728 UBE2WQ96B02 151 aa11.27□□□□□ -0.61
TRIM39-209ENST00000428728 RMI2Q96E14 147 aa11.27□□□□□ -0.61
TRIM39-209ENST00000428728 A0A087WX48 190 aa11.26□□□□□ -0.61
TRIM39-209ENST00000428728 C1QBP02746 253 aa11.26□□□□□ -0.61
TRIM39-209ENST00000428728 ZNF56Q15929 161 aa11.26□□□□□ -0.61
TRIM39-209ENST00000428728 SFT2D1Q8WV19 159 aa11.26□□□□□ -0.61
TRIM39-209ENST00000428728 COX11Q9Y6N1 276 aa11.26□□□□□ -0.61
TRIM39-209ENST00000428728 TRBV10-1A0A0K0K1A3 114 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 PFDN1O60925 122 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 SEC11BP0C7V7 166 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 UBE2D3P61077 147 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 UBE2D2P62837 147 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 KCNIP4Q6PIL6 250 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 Q6ZSA8 131 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 KCNRGQ8N5I3 272 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 OR10AG1Q8NH19 301 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
TRIM39-209ENST00000428728 TRBV7-3A0A075B6L6 115 aa11.24□□□□□ -0.61
TRIM39-209ENST00000428728 ZNF345Q14585 488 aa11.24□□□□□ -0.61
TRIM39-209ENST00000428728 PRR27Q6MZM9 219 aa11.24□□□□□ -0.61
TRIM39-209ENST00000428728 ZNF471Q9BX82 626 aaPredicted RBP11.24□□□□□ -0.61
TRIM39-209ENST00000428728 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
TRIM39-209ENST00000428728 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
TRIM39-209ENST00000428728 RBFOX3A6NFN3 312 aa11.23□□□□□ -0.61
TRIM39-209ENST00000428728 BAGE2Q86Y30 109 aa11.23□□□□□ -0.61
TRIM39-209ENST00000428728 LINC00528Q8N1L1 170 aa11.23□□□□□ -0.61
TRIM39-209ENST00000428728 MBD3L1Q8WWY6 194 aa11.23□□□□□ -0.61
TRIM39-209ENST00000428728 CHCHD7Q9BUK0 85 aa11.23□□□□□ -0.61
TRIM39-209ENST00000428728 UMAD1C9J7I0 102 aa11.22□□□□□ -0.61
TRIM39-209ENST00000428728 S100A9P06702 114 aaKnown RBP11.22□□□□□ -0.61
TRIM39-209ENST00000428728 RAB4BP61018 213 aa11.22□□□□□ -0.61
TRIM39-209ENST00000428728 SSTP61278 116 aa11.22□□□□□ -0.61
TRIM39-209ENST00000428728 ELOBQ15370 118 aa11.22□□□□□ -0.61
TRIM39-209ENST00000428728 NEXN-AS1Q8NBZ9 246 aa11.22□□□□□ -0.61
TRIM39-209ENST00000428728 TMEM262E9PQX1 116 aa11.21□□□□□ -0.61
TRIM39-209ENST00000428728 BCL2L11O43521 198 aa11.21□□□□□ -0.61
TRIM39-209ENST00000428728 Q8N976 141 aa11.21□□□□□ -0.61
TRIM39-209ENST00000428728 OR10G8Q8NGN5 311 aa11.21□□□□□ -0.61
TRIM39-209ENST00000428728 MLST8Q9BVC4 326 aa11.21□□□□□ -0.61
TRIM39-209ENST00000428728 SRRM2Q9UQ35 2752 aaKnown RBP11.21□□□□□ -0.62
TRIM39-209ENST00000428728 TRBV6-8A0A0A6YYG3 113 aa11.2□□□□□ -0.62
TRIM39-209ENST00000428728 KANTRA0A1W2PQU2 76 aa11.2□□□□□ -0.62
TRIM39-209ENST00000428728 PLA2G1BP04054 148 aaKnown RBP11.2□□□□□ -0.62
TRIM39-209ENST00000428728 CXCL1P09341 107 aa11.2□□□□□ -0.62
TRIM39-209ENST00000428728 SPANXN1Q5VSR9 72 aa11.2□□□□□ -0.62
TRIM39-209ENST00000428728 SCXQ7RTU7 201 aa11.2□□□□□ -0.62
TRIM39-209ENST00000428728 C1orf43Q9BWL3 253 aa11.2□□□□□ -0.62
TRIM39-209ENST00000428728 F5H697 171 aa11.19□□□□□ -0.62
TRIM39-209ENST00000428728 SNAI2O43623 268 aa11.19□□□□□ -0.62
TRIM39-209ENST00000428728 CRPP02741 224 aa11.19□□□□□ -0.62
TRIM39-209ENST00000428728 H2AFB1P0C5Y9 115 aa11.19□□□□□ -0.62
TRIM39-209ENST00000428728 MPV17L2Q567V2 206 aa11.19□□□□□ -0.62
TRIM39-209ENST00000428728 C15orf54Q8N8G6 183 aa11.19□□□□□ -0.62
TRIM39-209ENST00000428728 A0A0D9SG52 128 aa11.18□□□□□ -0.62
TRIM39-209ENST00000428728 HMSDA8MTL9 139 aa11.18□□□□□ -0.62
TRIM39-209ENST00000428728 ANGP03950 147 aaKnown RBP11.18□□□□□ -0.62
TRIM39-209ENST00000428728 OR5AL1P0C617 328 aa11.18□□□□□ -0.62
TRIM39-209ENST00000428728 Q0VG73 95 aa11.18□□□□□ -0.62
TRIM39-209ENST00000428728 ATRAIDQ6UW56 229 aa11.18□□□□□ -0.62
TRIM39-209ENST00000428728 CHCHD5Q9BSY4 110 aa11.18□□□□□ -0.62
TRIM39-209ENST00000428728 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
TRIM39-209ENST00000428728 MYCBP2O75592 4640 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms